BAC Information

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BAC

Clone NameB6Ng01-156H22
Chromosome10 (Build37)
Map Location 107,695,590 - 107,696,749
singlet/doubletsinglet
Overlap genePpp1r12a
Upstream geneLin7a, Myf5, Myf6, Ptprq, EG628870
Downstream genePawr, EG667814, Syt1, EG368203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156H22.bB6Ng01-156H22.g
ACCDH950984DH950985
length1,1411,182
definitionDH950984|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H22, 5' end.DH950985|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaatgtcttcagacagagctgagttcagtgacaaaagcggtc
atggtggaactaccccaagtaaccctggctactagaggcaaagcttcgtc
tccttttgaaattcctagggttttgttcaaaatgtggacaaaactatgat
ttctactctaactgtaaatagtaataggactgtgaagagtgtccccatgt
cattgcagacattccgacatttacagtaaagactttaagtcagacatttg
cacaagtcatttaacactgttacagcaaagcaaaacaggccaaaatggat
gtcataagggatttggagtcaggtttgtgaaggaagatgtacttaaaaat
attttagttatagaaaagataaaaccttcactcccagtttttgtttgttt
gttttttggtttggtttggttcggttgtttgaaatagcctctttctgcat
agccctgttgaccaggctggtctcaaacacacagagaaatgcttccttct
gccttgcaggagctgggattaagaacatgggccaccacatgtccagccct
cctttccttttttatataataaaaaataacagaacttggcttgttaagtg
ggcagcgctagtagtggacttgtgggccactagagaggtaacatggaatg
aggtgattcttagaggttggagtcaacctctctgttcctgtgaattggtt
ctgtgccaatgaagtgcttgtatctcttatctcttttaatggagtaaaac
ataatcttcagtcctctcattgcttctttaaaattaagaccattaaatat
agaaagggagaagtcaacatgctatactaagtataactggttcctgttca
gaaagaaatgagctgaaaagctactcagtggttgggagcacttattcttc
ttgcaggcccagttgcaattcccagcacccacgtggtggttcatagccct
cccagagggacccaatggtcatgtaagcatcaggcagccagtagtataga
cgtacatattgatattcactaaaccacataaataagattggatgagatgg
tcataattgcataagtggagttcaagccggttcaacatttcggagatact
ttttacccattagaaactgtgctgctgttttcacaacattg
gaattctttgtttagctctgtaccccatttttagtggggttatttgattt
tctggagtccaccttcttgagttctttgtatatattggatattcgtcccc
tatcagatttaggataggtaaagatcctttcccaatctattggtggcctt
tttgtctcattgactgtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaacttttcctctgtgcccatatcttcgaggtttttccccact
ttctcctctgtaagtttcagtgtctctggttttatgtggagcttcttgat
ccacttagacttgagctttgtacaggagataagaatgatcaatatgcatt
cttctatatgataatcaccagttgagccagcaccatttgttgaaaatgct
gtcttttttccactggatggcccagatgtccctcaacagaggaatggata
cagaaaatgtggtacatttacacaatggagtacaactcagctattaaaaa
caataaatttatgaaattcttaagcaaatggatggatctggaggatatca
tcctgagtgaggtaacccaatcagaaaagaattcacagccgggtgtggtg
gcgcacgcctttaatcccagcactcgggaggcagaggcaggcggatttct
gagtttgagaccagcctggtctacagagtgagttccaggacagccagggc
tacacagagaaaccctgtctcaaaaaacaaaaacaaaaaaaaaaaaaaaa
agatgagaaaagaaaaagaaaagaaagattcacatgatatacactcacta
ctaagtggatattaccccagaattagatacccaagatacaatctgcaaaa
cacatgaaactcagagaagaagtccaaagtgtgatacttcgttctctaga
tgggaacaaatacccatggagtgagtacagagacaagttggagtgagacg
agaagaacatcagtgactgctccacccagggatcatccataacagtcacc
aacgcgacacatgcatacctagcagattgctgacggactggaatgcgtct
cctgaagctagtcaggcctgcaaccgaagtagtccatcctattgagtcac
aggtcctattggaggactaggaagatcagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_107695590_107696749
seq2: B6Ng01-156H22.b_48_1188

seq1  GAATTCTGTAATGTCTTCAGACAGAGCTGAGTTCAGTGACAAAAGCGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAATGTCTTCAGACAGAGCTGAGTTCAGTGACAAAAGCGGTC  50

seq1  ATGGTGGAACTACCCCAAGTAACCCTGGCTACTAGAGGCAAAGCTTCGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGAACTACCCCAAGTAACCCTGGCTACTAGAGGCAAAGCTTCGTC  100

seq1  TCCTTTTGAAATTCCTAGGGTTTTGTTCAAAATGTGGACAAAACTATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGAAATTCCTAGGGTTTTGTTCAAAATGTGGACAAAACTATGAT  150

seq1  TTCTACTCTAACTGTAAATAGTAATAGGACTGTGAAGAGTGTCCCCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTCTAACTGTAAATAGTAATAGGACTGTGAAGAGTGTCCCCATGT  200

seq1  CATTGCAGACATTCCGACATTTACAGTAAAGACTTTAAGTCAGACATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGACATTCCGACATTTACAGTAAAGACTTTAAGTCAGACATTTG  250

seq1  CACAAGTCATTTAACACTGTTACAGCAAAGCAAAACAGGCCAAAATGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCATTTAACACTGTTACAGCAAAGCAAAACAGGCCAAAATGGAT  300

seq1  GTCATAAGGGATTTGGAGTCAGGTTTGTGAAGGAAGATGTACTTAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAGGGATTTGGAGTCAGGTTTGTGAAGGAAGATGTACTTAAAAAT  350

seq1  ATTTTAGTTATAGAAAAGATAAAACCTTCACTCCCAGTTTTTGTTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTTATAGAAAAGATAAAACCTTCACTCCCAGTTTTTGTTTGTTT  400

seq1  GTTTTTTGGTTTGGTTTGGTTCGGTTGTTTGAAATAGCCTCTTTCTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGGTTTGGTTTGGTTCGGTTGTTTGAAATAGCCTCTTTCTGCAT  450

seq1  AGCCCTGTTGACCAGGCTGGTCTCAAACACACAGAGAAATGCTTCCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGTTGACCAGGCTGGTCTCAAACACACAGAGAAATGCTTCCTTCT  500

seq1  GCCTTGCAGGAGCTGGGATTAAGAACATGGGCCACCACATGTCCAGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCAGGAGCTGGGATTAAGAACATGGGCCACCACATGTCCAGCCCT  550

seq1  CCTTTCCTTTTTTATATAATAAAAAATAACAGAACTTGGCTTGTTAAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTTTTTATATAATAAAAAATAACAGAACTTGGCTTGTTAAGTG  600

seq1  GGCAGCGCTAGTAGTGGACTTGTGGGCCACTAGAGAGGTAACATGGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCGCTAGTAGTGGACTTGTGGGCCACTAGAGAGGTAACATGGAATG  650

seq1  AGGTGATTCTTAGAGGTTGGAGTCAACCTCTCTGTTCCTGTGAATTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATTCTTAGAGGTTGGAGTCAACCTCTCTGTTCCTGTGAATTGGTT  700

seq1  CTGTGCCAATGAAGTGCTTGTATCTCTTATCTCTTTTAATGGAGTAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCAATGAAGTGCTTGTATCTCTTATCTCTTTTAATGGAGTAAAAC  750

seq1  ATAATCTTCAGTCCTCTCATTGCTTCTTTAAAATTAAGACCATTAAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTCAGTCCTCTCATTGCTTCTTTAAAATTAAGACCATTAAATAT  800

seq1  AGAAAGGGAGAAGTCAACATGCTATACTAAGTATAACTGGTTCCTGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGAGAAGTCAACATGCTATACTAAGTATAACTGGTTCCTGTTCA  850

seq1  GAAAGAAATGAGCTGAAAAGCTTACTCAGTGGTTGGGAGCACTTATTCTT  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAAAGAAATGAGCTGAAAAGC-TACTCAGTGGTTGGGAGCACTTATTCTT  899

seq1  CTTGCAGGCCCAGTTGCAATTCCCAGCACCCACGTGGTGGTTCATAGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGCCCAGTTGCAATTCCCAGCACCCACGTGGTGGTTCATAGCCC  949

seq1  TCCCAGAGGGACCCAATGGTCATGTAAGCATCAGGCAGGCAAGTAGTATA  1000
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  TCCCAGAGGGACCCAATGGTCATGTAAGCATCAGGCA-GCCAGTAGTATA  998

seq1  GACGTACATATAGATAATTCACCTATACACATAAAATAAAGATTGAATGA  1050
      ||||||||||| ||| ||||||  |  ||||||||   ||||||| ||||
seq2  GACGTACATATTGAT-ATTCACTAAACCACATAAA--TAAGATTGGATGA  1045

seq1  GAATGGTCATAATTGCATTAGTGAGTTTCAAAGCCAGGTACAAACATTTT  1100
      | |||||||||||||||| ||||   ||| ||||| ||| | ||||||| 
seq2  G-ATGGTCATAATTGCATAAGTGGAGTTC-AAGCC-GGTTC-AACATTT-  1090

seq1  CTGAAGATACTTTTTTAACCCATTAAAAACTGTGCTTGCTTGTTTTAATC  1150
        | |||||||||||  |||||||| ||||||||| ||| |||||   ||
seq2  -CGGAGATACTTTTT--ACCCATTAGAAACTGTGC-TGC-TGTTT---TC  1132

seq1  ACAAACATTG  1160
      || |||||||
seq2  AC-AACATTG  1141