BAC Information

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BAC

Clone NameB6Ng01-157F13
Chromosome10 (Build37)
Map Location 23,125,041 - 23,126,196
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21, Eya4
Downstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157F13.bB6Ng01-157F13.g
ACCDH951605DH951606
length1,149259
definitionDH951605|Mus musculus domesticus DNA, BAC clone: B6Ng01-157F13, 5' end.DH951606|Mus musculus domesticus DNA, BAC clone: B6Ng01-157F13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagatgttctctttgtgccaagggtgtggttcgtgggagagta
ccctcctaggacgcacaggctttattaggaattaaagcattacatatcaa
ttctaatggttgactttttacctgttaaaagttaaataataatggttaga
gtatttttaaattaattcttccatagacataaagaaaaatttaaaggtat
agaattgttttcaaacatactgattatataatataaataataaaatatgt
ttctggtgtctatgaatctaatatcactgctagtttgatatttacctaag
tgtttgtatgtatttatttcaaaaaagtgtttgcagttattgaaattttt
gcactttagtgaacaaatcattttttatgacacctgagttcctagaactc
ttgggatctaaaaacaaaagatgaaaatatgtgatattaaggtatgacaa
tggaattttcagaattgaagtaaaagaactgatgtgtatttgcatttccc
agcattgatatttactacaacatgatgcaagtaaatgatcccttacgtca
ctaaaaaggcacagataggtgacagggaagaagcagaagcaaaaggccaa
ggatgcaaggatgaagagttaagaaacaaagtgatgggaaataaattagt
tcatcccctgtagacttaggtttttcaaaacctactttaattgtgattct
ttaatgcttcattttcccttcaggccaccacccaccagaggtgggggaaa
gaaaggttaataggaaacagggttgtggaaatagttcttggggataattc
caatcttccttgccagtagtccagttccctaaggaacaccaacacaaatc
agcagcagtggctcgatccagaagaaactgctaggctttgccattggcat
gagtcagctgaagcagcaagggagcagcaggagctctgccagaagtcatc
tggtgtatttctatccatgaagtcgccgagaagtgaaaatcagcaaaaat
aaagcaaagccgaacaatacagagcatcctccactgtctggttaggctat
tcttatactttttcaaacctatatgcctctcaagcatcacctccagcaac
atacatggccccttcaccaggcaactttcagaaaaacaccatgtttgct
actttattttttaaaagagaggctgttgaggtttggccttttgttatcta
ttataatgctatgtgtgggaccccaggacctgttttctcagagaccaaag
agtccacatggtagaatttgctctcaagttatttctgattggtaaataaa
gatgccaacagccaatagatggtgagaagagacataggtggggttgaggt
tttccaggcttagggtgaaaggagatgcatgtgaagaagaagaagaagaa
ggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23125041_23126196
seq2: B6Ng01-157F13.b_45_1193

seq1  GAATTCTAAGATGTTCTCTTTGTGCCAAGGGTGTGGTTCGTGGGAGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGATGTTCTCTTTGTGCCAAGGGTGTGGTTCGTGGGAGAGTA  50

seq1  CCCTCCTAGGACGCACAGGCTTTATTAGGAATTAAAGCATTACATATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTAGGACGCACAGGCTTTATTAGGAATTAAAGCATTACATATCAA  100

seq1  TTCTAATGGTTGACTTTTTACCTGTTAAAAGTTAAATAATAATGGTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGGTTGACTTTTTACCTGTTAAAAGTTAAATAATAATGGTTAGA  150

seq1  GTATTTTTAAATTAATTCTTCCATAGACATAAAGAAAAATTTAAAGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTAAATTAATTCTTCCATAGACATAAAGAAAAATTTAAAGGTAT  200

seq1  AGAATTGTTTTCAAACATACTGATTATATAATATAAATAATAAAATATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGTTTTCAAACATACTGATTATATAATATAAATAATAAAATATGT  250

seq1  TTCTGGTGTCTATGAATCTAATATCACTGCTAGTTTGATATTTACCTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTCTATGAATCTAATATCACTGCTAGTTTGATATTTACCTAAG  300

seq1  TGTTTGTATGTATTTATTTCAAAAAAGTGTTTGCAGTTATTGAAATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTATGTATTTATTTCAAAAAAGTGTTTGCAGTTATTGAAATTTTT  350

seq1  GCACTTTAGTGAACAAATCATTTTTTATGACACCTGAGTTCCTAGAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTAGTGAACAAATCATTTTTTATGACACCTGAGTTCCTAGAACTC  400

seq1  TTGGGATCTAAAAACAAAAGATGAAAATATGTGATATTAAGGTATGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATCTAAAAACAAAAGATGAAAATATGTGATATTAAGGTATGACAA  450

seq1  TGGAATTTTCAGAATTGAAGTAAAAGAACTGATGTGTATTTGCATTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTTCAGAATTGAAGTAAAAGAACTGATGTGTATTTGCATTTCCC  500

seq1  AGCATTGATATTTACTACAACATGATGCAAGTAAATGATCCCTTACGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGATATTTACTACAACATGATGCAAGTAAATGATCCCTTACGTCA  550

seq1  CTAAAAAGGCACAGATAGGTGACAGGGAAGAAGCAGAAGCAAAAGGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAGGCACAGATAGGTGACAGGGAAGAAGCAGAAGCAAAAGGCCAA  600

seq1  GGATGCAAGGATGAAGAGTTAAGAAACAAAGTGATGGGAAATAAATTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAAGGATGAAGAGTTAAGAAACAAAGTGATGGGAAATAAATTAGT  650

seq1  TCATCCCCTGTAGACTTAGGTTTTTCAAAACCTACTTTAATTGTGATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCCTGTAGACTTAGGTTTTTCAAAACCTACTTTAATTGTGATTCT  700

seq1  TTAATGCTTCATTTTCCCTTCAGGCCACCACCCACCAGAGGTGGGGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTTCATTTTCCCTTCAGGCCACCACCCACCAGAGGTGGGGGAAA  750

seq1  GAAAGGTTAATAGGAAACAGGGTTGTGGAAATAGTTCTTGGGGATAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTTAATAGGAAACAGGGTTGTGGAAATAGTTCTTGGGGATAATTC  800

seq1  CAATCTTCCTTGCCAGTAGTCCAGTTCCCTAAGGAAACACCAAACACAAA  850
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  CAATCTTCCTTGCCAGTAGTCCAGTTCCCTAAGG-AACACC-AACACAAA  848

seq1  TCAGCAGCAGTGGCTCGATCCAGAAGAAACTGCTAGGCTTTGCCCATTGG  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAGCAGCAGTGGCTCGATCCAGAAGAAACTGCTAGGCTTTG-CCATTGG  897

seq1  CATGAGTCAGCTGAAGCAGCAAGGGAGCAGCAGGAGCCCTGCCAGAAGTC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CATGAGTCAGCTGAAGCAGCAAGGGAGCAGCAGGAGCTCTGCCAGAAGTC  947

seq1  ATCTGGTGTATTTCTATCCATGAAGTCG-CGAGAAGTGAAAATCAGCAAA  999
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATCTGGTGTATTTCTATCCATGAAGTCGCCGAGAAGTGAAAATCAGCAAA  997

seq1  AATAAAGCAAGGCGAACCAATACAAGAGCATCCTCCACTGTCT-GTTAGG  1048
      |||||||||| ||  | |||||| ||||||||||||||||||| ||||||
seq2  AATAAAGCAAAGCCGAACAATAC-AGAGCATCCTCCACTGTCTGGTTAGG  1046

seq1  CTATACTTATACTTTTTCAAAACATTACATGCCTCTCAAGCATCCACTCC  1098
      |||| |||||||||||||||| |  || ||||||||||||||||  ||||
seq2  CTATTCTTATACTTTTTCAAACC--TATATGCCTCTCAAGCATCACCTCC  1094

seq1  AGCAAAACATCACAT-GCCCCTTCACCAGGCAACTTCCAGAAAAACACAC  1147
      |||  ||||| |||| |||||||||||||||||||| ||||||||||| |
seq2  AGC--AACAT-ACATGGCCCCTTCACCAGGCAACTTTCAGAAAAACAC-C  1140

seq1  ATGTCTGCT  1156
      |||| ||||
seq2  ATGTTTGCT  1149