BAC Information

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BAC

Clone NameB6Ng01-162F02
Chromosome10 (Build37)
Map Location 32,729,171 - 32,730,096
singlet/doubletsinglet
Overlap geneEG667761
Upstream geneTcba1
Downstream geneTrdn, A330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162F02.bB6Ng01-162F02.g
ACCDH955187DH955188
length1,2191,124
definitionDH955187|Mus musculus domesticus DNA, BAC clone: B6Ng01-162F02, 5' end.DH955188|Mus musculus domesticus DNA, BAC clone: B6Ng01-162F02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagttagattccagagaatcaaataaccctattaaaaatgg
ggtgcaaagctaaacaaagaattttcaactgaggaatatagaatggccca
gaagcatctaaagaaatgttcaacatccttagtcatcagggaaatgcaaa
tcaacacaaccctgagattccatctcacaccagtcaggatggctaggatc
aaaaactcaggtaacagcagatgctggaaagcatgcagaggaaggaatat
tcctccattgttggtggggttgcactgatataaccattctgaaatcagtc
ttgcagttcctcagaaaattggacatagtatttattaccagagtactcat
gtatatcactcctgggcatatacccaaaagatgtttaacatataacaagg
gcacatgctccactatgttcatagcagccttatttgtaattggctgaagc
tacaaagaatccattcaagagaggaatggatacagaaaatgtggtacatt
tacacaatggagtactactccgctattaaaaaaaaaacaaagaaatcatg
aaattttttggcaaatgatggaactagaaaatatcctgaatgaggtaacc
caatcacaaaagaacacacattgtatatattcactgataagtggaaatta
tcccaaaatctcataatagccaagatacaattcatagatcacataaagct
caagaagaaagaagaccatagtgtgggtgcttcagtccttcttagaaggg
ggaacaaaatactcactagaggaaatacagagacaaagtatggagcagag
actgaagaaaatgccattcagaaacttgctttcctgggaatctatcctat
atacagtcactgtcttagtcagggtttctattcctgcacaaaaatcatga
ccaagaagcaagttggggagtaaagggtttattcagcttacacttccagg
ttgctgttcaccaccgaaggaagtcagactggaactcaagcatgtcagaa
gcagaactgatgctagacagtcaccaaatacatacactattttggatgca
gaaatgcatgctgataggagtctgaatatagttgtctctggagctttcga
gctgacaaatactgaggcagaaactcacagccaatgttcttgactgagca
tttgacctatgcagattaagaaggctgaagagcgagatagctgcaactct
ctgagaaacacccctagat
gaattccttgttccaaacagcaattggttattgcagaatattgatatttg
acttattacataccatcattttaaataaaattgatactcatcctaagata
agttaaaaattgctcatgcatgcttttgtatcttcatgcatgcttacatc
ccatttactgtatttaaaaacaacccctctatgggagaaaagtatatgtg
aattgaatcacatgattattcttttgagtttcctcctgtttcagcacaga
taattaaattgtgtgctgaagatggtgtttaaaaatattgaacaatcaaa
ctttaagttgtatattaacagtcaatattatatctcagagcttgcaattg
cttatgcaacttataagaaaaaatactatttctttacgaaaattgttttt
gggcagttaagaaattgtcctaagttgcctggaaaagacccccagggttt
gcttttgtgtgatagaggtttacataaagctttaactaataaagattaca
gatagctcctgaaaagatacaaactcaggattcttatatttatttgggtt
ttaaaagatagttatttgcagagacaatttaaagactttctctaatttct
gattaataaataaattttacacaagtgactataatgacttttcaagcatt
ctagttacaacctctcttcaagagaaacaattgaaagtgtaattagtcac
tgttcatgttatattaaaactgactaacagttcagtatctaaaattttga
tgaaaatacaagattgtattttgatgcgtgaacaccctttttatattcaa
catattagagcacatgcatcattacctggctcctattcaaaggaaaaatt
cctaagctgaagttagccactggcaagaaagactaaacagataagtccta
gctgtttattttgtaaatctaaatagtatatatgactgggctgaatagcc
accctagaaacaaatgttctgttcttgttagtcaaagcattcatgacagt
tttgccatcagatgaatgtgactcatctgactggctcttataatctcaag
gacaaggcatttagaacgtgccatcacccctctcagtctatataacaaaa
ggggaataaaggctatgaacgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32729171_32730096
seq2: B6Ng01-162F02.g_279_1190

seq1  TGATTATTCTTTTGAGTTTCCTCCTGTTTCAGCACAGATAATTAAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTCTTTTGAGTTTCCTCCTGTTTCAGCACAGATAATTAAATTGT  50

seq1  GTGCTGAAGATGGTGTTTAAAAATATTGAACAATCAAACTTTAAGTTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAAGATGGTGTTTAAAAATATTGAACAATCAAACTTTAAGTTGTA  100

seq1  TATTAACAGTCAATATTATATCTCAGAGCTTGCAATTGCTTATGCAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACAGTCAATATTATATCTCAGAGCTTGCAATTGCTTATGCAACTT  150

seq1  ATAAGAAAAAATACTATTTCTTTACGAAAATTGTTTTTGGGCAGTTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAAAATACTATTTCTTTACGAAAATTGTTTTTGGGCAGTTAAGA  200

seq1  AATTGTCCTAAGTTGCCTGGAAAAGACCCCCAGGGTTTGCTTTTGTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCCTAAGTTGCCTGGAAAAGACCCCCAGGGTTTGCTTTTGTGTGA  250

seq1  TAGAGGTTTACATAAAGCTTTAACTAATAAAGATTACAGATAGCTCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTTTACATAAAGCTTTAACTAATAAAGATTACAGATAGCTCCTGA  300

seq1  AAAGATACAAACTCAGGATTCTTATATTTATTTGGGTTTTAAAAGATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACAAACTCAGGATTCTTATATTTATTTGGGTTTTAAAAGATAGT  350

seq1  TATTTGCAGAGACAATTTAAAGACTTTCTCTAATTTCTGATTAATAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCAGAGACAATTTAAAGACTTTCTCTAATTTCTGATTAATAAATA  400

seq1  AATTTTACACAAGTGACTATAATGACTTTTCAAGCATTCTAGTTACAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACACAAGTGACTATAATGACTTTTCAAGCATTCTAGTTACAACC  450

seq1  TCTCTTCAAGAGAAACAATTGAAAGTGTAATTAGTCACTGTTCATGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCAAGAGAAACAATTGAAAGTGTAATTAGTCACTGTTCATGTTAT  500

seq1  ATTAAAACTGACTAACAGTTCAGTATCTAAAATTTTGATGAAAATACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACTGACTAACAGTTCAGTATCTAAAATTTTGATGAAAATACAAG  550

seq1  ATTGTATTTTGATGCGTGAACACCCTTTTTATATTCAACATATTAGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTTTGATGCGTGAACACCCTTTTTATATTCAACATATTAGAGCA  600

seq1  CATGCATCATTACCTGGCTCCTATTCAAAGGAAAAATTCCTAAGCTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATCATTACCTGGCTCCTATTCAAAGGAAAAATTCCTAAGCTGAAG  650

seq1  TTAGCCACTGGCAAGAAAGACTAAACAGATAAGTCCTAGCTGTTTATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCACTGGCAAGAAAGACTAAACAGATAAGTCCTAGCTGTTTATTTT  700

seq1  GTAAATCTAAATAGTATATATGACTGGGCTGAATAGCCACCCTAGAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCTAAATAGTATATATGACTGGGCTGAATAGCCACCCTAGAAACA  750

seq1  AATGTTCTGTTCTTGTTAGTCAAAAGCATTCATGACAGTTTTGCCATCAG  800
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATGTTCTGTTCTTGTTAGTC-AAAGCATTCATGACAGTTTTGCCATCAG  799

seq1  ATGAATGTGACTCATCTGACTGGCCTTCCTTATAATCCTCAAGGACAAGG  850
      ||||||||||||||||||||||||    |||||||| |||||||||||||
seq2  ATGAATGTGACTCATCTGACTGGC---TCTTATAAT-CTCAAGGACAAGG  845

seq1  CATTGTAGAACGTGCCCATCA-CACTCTCAAGTCCTATTTAATTAAACAA  899
      |||| ||||||||| |||||| | ||||| ||| |||| |     |||||
seq2  CATT-TAGAACGTG-CCATCACCCCTCTC-AGT-CTATAT-----AACAA  886

seq1  AAAGGGGGGATAAAGGCTATG-ACGTCA  926
      ||  |||| |||||||||||| ||||||
seq2  AA--GGGGAATAAAGGCTATGAACGTCA  912