BAC Information

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BAC

Clone NameB6Ng01-163O11
Chromosome10 (Build37)
Map Location 102,709,910 - 102,912,516
singlet/doubletdoublet
Overlap geneLOC100043277, 6430590A10Rik, Slc6a15, EG667697
Upstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1
Downstream geneLOC667701, EG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163O11.bB6Ng01-163O11.g
ACCDH956372DH956373
length9761,113
definitionDH956372|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O11, 5' end.DH956373|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,709,910 - 102,710,481)(102,911,388 - 102,912,516)
sequence
gaattccatgtttctaaggacagaagaaatctatctttcttctgctgaga
aattactatcttatacttaggactattatttattattattattattatta
ttattaatcttttttaacagcccagttgttatcttcctcctgatctgctc
tctgacagttcctcatcccattcctccttcctccccaacacctacccctg
cccctggtattgaagaggatgtctccagacctccccactccctggagcct
caactctatcaaggattaggtgcatcttctttcactgaggcaagaccagg
cagccctctgctgtatgtatcaggagtcttgtatcagctagtgtatggtg
cctgattggtggctcagtgtttgagagatctggaagtccaggttaattga
gactcctggtcttcctatggggtccttcttctcagcttcctccagccttt
ccctaattcaaccacaggggtcctgggattctgtccattggttgagtgta
agtatctgtatctgactcttgcagttgtttgttgggcctcttggagggca
gtcatgctaggctcctgtctgtaagcacaccataccatcagtaacagtgt
caggccttggagcatccccttgagatggatccaaatttgagccagtcatt
ggacctttctctcagtctcttctccatttttgtccatgcagttcttttaa
acaattctgggtcagagtttttgactgtgggatggcaaccccatctctcc
acttgatggtctatctttctactggaagtagactctgaaatgtccttctc
cccactgttgggcgtttcatctacggtccctccctttgaatcctgagagt
ctatcacatcccaggtctctggtacattatagagggtccccccccacctc
ctacctcccaggttgtctgttttcattctttctgattgcctcagggcttc
actcctgctccccaccaatacttgat
gaattcagagatgaaaacacggacactggactcaagtctttcttgcaata
acgtatataccaaatactgctgtcattgctgttttcaagctttgcttggt
tttttttttatgttacttggcctacatttgtgtatgtgcacctctttcat
gtccagtgtccaccgagctgcaaatgcacactggattgtcaggaattgga
gttacaggaatctgtgagccactgtgtgggtaactgggaaatgaacctgg
gtcctctggaagagccaagtactcttgaccctctcttagccctaagtaaa
ttcttgtttgtttgtttgtttgtttgttttaactttcctacttctgcaat
gaaaaacagaggctagatagaaattcacaacttgttcagttcacacagtt
atcatggggcactgctggatttaaacctaaatacacctgctctaagttag
tcttagttctaattaccttgccttttatttgacctatgcattactaaaga
tttgagtcattatgcttttggcctcttcctcccatggtaagaatttttat
agtttatctgagtagatatttttgttatttcagaatcagattgtcagcaa
ttttcttccatcagaaactttatttctccactgtcatgtaacacatacgc
aaatattgagattcaggacatcggtgtctttggagatttgaatagattgc
ctattacaaatctaaatgtgtgctctctacttaagtgctatgtcctaact
tatatctaggctacaggctgtttctgttttggttagtcagactaaggttc
atatcctcgacaattctccaggtcacaggggtgattaaagccagaaaact
ttggattctgtatgtgtttgattatagtcataaactcacaggtattgagt
tgaaatgaagaggtcagcagaaaacatcccatgagaatatgagattgtga
atccctaggggaaaaaatgcacaactgaagtttgtatattagtaaagcta
tgcaatattcttataaaagaatctgcttctcctcattgctttcaagttat
caactgtggtcaattcattacgcagcgatttttttaccttggcctggatt
tgttcattttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_102709910_102710481
seq2: B6Ng01-163O11.b_43_614

seq1  GAATTCCATGTTTCTAAGGACAGAAGAAATCTATCTTTCTTCTGCTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTTTCTAAGGACAGAAGAAATCTATCTTTCTTCTGCTGAGA  50

seq1  AATTACTATCTTATACTTAGGACTATTATTTATTATTATTATTATTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTATCTTATACTTAGGACTATTATTTATTATTATTATTATTATTA  100

seq1  TTATTAATCTTTTTTAACAGCCCAGTTGTTATCTTCCTCCTGATCTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATCTTTTTTAACAGCCCAGTTGTTATCTTCCTCCTGATCTGCTC  150

seq1  TCTGACAGTTCCTCATCCCATTCCTCCTTCCTCCCCAACACCTACCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGTTCCTCATCCCATTCCTCCTTCCTCCCCAACACCTACCCCTG  200

seq1  CCCCTGGTATTGAAGAGGATGTCTCCAGACCTCCCCACTCCCTGGAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGTATTGAAGAGGATGTCTCCAGACCTCCCCACTCCCTGGAGCCT  250

seq1  CAACTCTATCAAGGATTAGGTGCATCTTCTTTCACTGAGGCAAGACCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTATCAAGGATTAGGTGCATCTTCTTTCACTGAGGCAAGACCAGG  300

seq1  CAGCCCTCTGCTGTATGTATCAGGAGTCTTGTATCAGCTAGTGTATGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTCTGCTGTATGTATCAGGAGTCTTGTATCAGCTAGTGTATGGTG  350

seq1  CCTGATTGGTGGCTCAGTGTTTGAGAGATCTGGAAGTCCAGGTTAATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGGTGGCTCAGTGTTTGAGAGATCTGGAAGTCCAGGTTAATTGA  400

seq1  GACTCCTGGTCTTCCTATGGGGTCCTTCTTCTCAGCTTCCTCCAGCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTGGTCTTCCTATGGGGTCCTTCTTCTCAGCTTCCTCCAGCCTTT  450

seq1  CCCTAATTCAACCACAGGGGTCCTGGGATTCTGTCCATTGGTTGAGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATTCAACCACAGGGGTCCTGGGATTCTGTCCATTGGTTGAGTGTA  500

seq1  AGTATCTGTATCTGACTCTTGCAGTTGTTTGTTGGGCCTCTTGGAGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGTATCTGACTCTTGCAGTTGTTTGTTGGGCCTCTTGGAGGGCA  550

seq1  GTCATGCTAGGCTCCTGTCTGT  572
      ||||||||||||||||||||||
seq2  GTCATGCTAGGCTCCTGTCTGT  572

seq1: chr10_102911388_102912516
seq2: B6Ng01-163O11.g_69_1181 (reverse)

seq1  AAGAGAAATGAACAAATTCAAAGGGCAAGGTTAAAAAAAATGCTGCTGAA  50
      |||| |||||||||||| |  ||| ||||| ||||||||  ||||| | |
seq2  AAGA-AAATGAACAAATCC--AGGCCAAGG-TAAAAAAATCGCTGC-GTA  45

seq1  ATGAATTGACCACAGTTGATAAACCTGAAAGCAATTGAGGAGAAGCAAGA  100
      |||||||||||||||||||| ||| ||||||||| ||||||||||| |||
seq2  ATGAATTGACCACAGTTGAT-AACTTGAAAGCAA-TGAGGAGAAGC-AGA  92

seq1  TTCTTTTATTAAGGATATTTGCATGGCTTTACT-ATATACAAACTTCAGT  149
      |||||||| |||| ||| |||||| |||||||| ||||||||||||||||
seq2  TTCTTTTA-TAAGAATA-TTGCATAGCTTTACTAATATACAAACTTCAGT  140

seq1  TGTGCTATTTTTTCCCCCTAGGGATTCACAATCTCATATTCTTCATGGGA  199
      ||||| ||||||| ||||||||||||||||||||||||||| ||||||||
seq2  TGTGC-ATTTTTT-CCCCTAGGGATTCACAATCTCATATTC-TCATGGGA  187

seq1  TGTTTTTCTGCTGACCTCTTCATTTCAACTCAATACCTGTTGAGTTTATG  249
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TG-TTTTCTGCTGACCTCTTCATTTCAACTCAATACCTG-TGAGTTTATG  235

seq1  ACTATAATCAAAACACATTACAGAATCCAAAGTTTTCTGGCTTTAATCAC  299
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  ACTATAATC-AAACACA-TACAGAATCCAAAGTTTTCTGGCTTTAATCAC  283

seq1  CCCTGTGACCTGGAGAATTGTCGAGGATATGAACCTTAGTCTGACTAACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGACCTGGAGAATTGTCGAGGATATGAACCTTAGTCTGACTAACC  333

seq1  AAAACAGAAACAGCCTGTAGCCTAGATATAAGTTAGGACATAGCACTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAAACAGCCTGTAGCCTAGATATAAGTTAGGACATAGCACTTAA  383

seq1  GTAGAGAGCACACATTTAGATTTGTAATAGGCAATCTATTCAAATCTCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAGCACACATTTAGATTTGTAATAGGCAATCTATTCAAATCTCCA  433

seq1  AAGACACCGATGTCCTGAATCTCAATATTTGCGTATGTGTTACATGACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACCGATGTCCTGAATCTCAATATTTGCGTATGTGTTACATGACAG  483

seq1  TGGAGAAATAAAGTTTCTGATGGAAGAAAATTGCTGACAATCTGATTCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATAAAGTTTCTGATGGAAGAAAATTGCTGACAATCTGATTCTG  533

seq1  AAATAACAAAAATATCTACTCAGATAAACTATAAAAATTCTTACCATGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAAAAATATCTACTCAGATAAACTATAAAAATTCTTACCATGGG  583

seq1  AGGAAGAGGCCAAAAGCATAATGACTCAAATCTTTAGTAATGCATAGGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGCCAAAAGCATAATGACTCAAATCTTTAGTAATGCATAGGTC  633

seq1  AAATAAAAGGCAAGGTAATTAGAACTAAGACTAACTTAGAGCAGGTGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAGGCAAGGTAATTAGAACTAAGACTAACTTAGAGCAGGTGTAT  683

seq1  TTAGGTTTAAATCCAGCAGTGCCCCATGATAACTGTGTGAACTGAACAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTAAATCCAGCAGTGCCCCATGATAACTGTGTGAACTGAACAAG  733

seq1  TTGTGAATTTCTATCTAGCCTCTGTTTTTCATTGCAGAAGTAGGAAAGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAATTTCTATCTAGCCTCTGTTTTTCATTGCAGAAGTAGGAAAGTT  783

seq1  AAAACAAACAAACAAACAAACAAACAAGAATTTACTTAGGGCTAAGAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAAACAAACAAACAAACAAGAATTTACTTAGGGCTAAGAGAG  833

seq1  GGTCAAGAGTACTTGGCTCTTCCAGAGGACCCAGGTTCATTTCCCAGTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGAGTACTTGGCTCTTCCAGAGGACCCAGGTTCATTTCCCAGTTA  883

seq1  CCCACACAGTGGCTCACAGATTCCTGTAACTCCAATTCCTGACAATCCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACAGTGGCTCACAGATTCCTGTAACTCCAATTCCTGACAATCCAG  933

seq1  TGTGCATTTGCAGCTCGGTGGACACTGGACATGAAAGAGGTGCACATACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTTGCAGCTCGGTGGACACTGGACATGAAAGAGGTGCACATACA  983

seq1  CAAATGTAGGCCAAGTAACATAAAAAAAAAACCAAGCAAAGCTTGAAAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTAGGCCAAGTAACATAAAAAAAAAACCAAGCAAAGCTTGAAAAC  1033

seq1  AGCAATGACAGCAGTATTTGGTATATACGTTATTGCAAGAAAGACTTGAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGACAGCAGTATTTGGTATATACGTTATTGCAAGAAAGACTTGAG  1083

seq1  TCCAGTGTCCGTGTTTTCATCTCTGAATTC  1129
      ||||||||||||||||||||||||||||||
seq2  TCCAGTGTCCGTGTTTTCATCTCTGAATTC  1113