BAC Information

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BAC

Clone NameB6Ng01-165F05
Chromosome10 (Build37)
Map Location 57,032,733 - 57,127,562
singlet/doubletdoublet
Overlap geneLOC668363
Upstream geneEG629732, Gja1, EG668347, LOC100042622, LOC668355, LOC100042628, EG629739, LOC629742
Downstream geneHsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165F05.bB6Ng01-165F05.g
ACCDH957415DH957416
length1,135148
definitionDH957415|Mus musculus domesticus DNA, BAC clone: B6Ng01-165F05, 5' end.DH957416|Mus musculus domesticus DNA, BAC clone: B6Ng01-165F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,126,429 - 57,127,562)(57,032,733 - 57,032,880)
sequence
gaattctaaattgctttcaaagtggctccttttttatttacccttttcct
cctatgtgctacagttgatcctcctcatatttaatatcattcatctactt
aatatttgctaggggagttatattttattacaagtgtgaatattaagatg
tatgttaaaataaaagaaggtattactattataatcagtgaaaaatataa
atgcttactttgttagttaatactgtatgtccactagccaagttgtatac
ttgtgaatgggacatgtttatctatggaggaaaagtattaaaacattctt
atttcatgagattacaatattcataaatgagaaccatttagtagtacaat
aacatatactgtcactttttatttctttttcttctttctttatagttttg
tttatatgccttctgtctgacttctcaagaaataagccttagagtgcttc
atgtctctgtggtatatttttgagaccatttatccaatcagctcaggcac
tgattacactaatacctgtgttactcagctttctgtaactatagcagacc
tcagaccaatgggcttttgaagaaaaaaaggatattttttgctcacagtt
cccgctcatggttagttggcctgtagtttttaggcctgtggttaactagg
acaagatagaactagtttagcagaacaaagctgttcacttcatggtaact
gtgaaagaaagataaatagcccagtgtcccagagttcctttccaaggcat
cccaaatgatcagaaacatttccctaagtcccatttcttaaagttcacca
gttcttaatagtgacaagctctggaccaagccttttacactgggctcttt
gagctcattatggaaaccaattctcttctaaagaatggcccagatccaaa
tttgggcagaaagaagccatcaaagaagaaaacgttttcctgtgactgaa
gagatatatgaaagtcgatgaaaggaaaggttgttttaatgtctcctgta
gcggccttacattgtcagacagaaagtagatgactttttgttgtcaacaa
gaaaacagctgaaagattagaacaaacaagaaaacttcattttctctatt
tactgacttattcaaagtaatttcggcttagacca
agaaatagtcacaggggttcaagaagccctaatgaagaggaaggtgtatc
tgagaactttatcaaagaaaggcagaaagaagaaaatgataaagaagaga
gagagagagagaaagggagggagggaggaagaaagggaggaaggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_57126429_57127562
seq2: B6Ng01-165F05.b_46_1180 (reverse)

seq1  TGGTCT-AGCTGAAATTACTTTTGAATAAGTCAGTAAAT-GAGAAAATGA  48
      |||||| ||| |||||||| ||||||||||||||||||| ||||||||||
seq2  TGGTCTAAGCCGAAATTAC-TTTGAATAAGTCAGTAAATAGAGAAAATGA  49

seq1  AGTTTTTCTTTGTTTTGTTCTAATCTTTCAGCTG-TTTCTTGTTGACAAC  97
      || |||||||   ||||||||||||||||||||| |||||||||||||||
seq2  AG-TTTTCTT--GTTTGTTCTAATCTTTCAGCTGTTTTCTTGTTGACAAC  96

seq1  -AAAAGTCATCTACTTTCTGTCTGAC-ATGTAAGG-CGCTACAGGAGACA  144
       ||||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  AAAAAGTCATCTACTTTCTGTCTGACAATGTAAGGCCGCTACAGGAGACA  146

seq1  TTAAAACAAACCTTTCCTTTCATCGACTTTCATATATCTCTTCAGTCACA  194
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAC-AACCTTTCCTTTCATCGACTTTCATATATCTCTTCAGTCACA  195

seq1  GGAAAACGTTTTCTTCTTTGATGGCTTCTTTCTGCCCAAATTTGGATCTG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACGTTTTCTTCTTTGATGGCTTCTTTCTGCCCAAATTTGGATCTG  245

seq1  GGCCATTCTTTAGAAGAGAATTGGTTTCCATAATGAGCTCAAAGAGCCCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTCTTTAGAAGAGAATTGGTTTCCATAATGAGCTCAAAGAGCCCA  295

seq1  GTGTAAAAGGCTTGGTCCAGAGCTTGTCACTATTAAGAACTGGTGAACTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAAGGCTTGGTCCAGAGCTTGTCACTATTAAGAACTGGTGAACTT  345

seq1  TAAGAAATGGGACTTAGGGAAATGTTTCTGATCATTTGGGATGCCTTGGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATGGGACTTAGGGAAATGTTTCTGATCATTTGGGATGCCTTGGA  395

seq1  AAGGAACTCTGGGACACTGGGCTATTTATCTTTCTTTCACAGTTACCATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTCTGGGACACTGGGCTATTTATCTTTCTTTCACAGTTACCATG  445

seq1  AAGTGAACAGCTTTGTTCTGCTAAACTAGTTCTATCTTGTCCTAGTTAAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACAGCTTTGTTCTGCTAAACTAGTTCTATCTTGTCCTAGTTAAC  495

seq1  CACAGGCCTAAAAACTACAGGCCAACTAACCATGAGCGGGAACTGTGAGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCCTAAAAACTACAGGCCAACTAACCATGAGCGGGAACTGTGAGC  545

seq1  AAAAAATATCCTTTTTTTCTTCAAAAGCCCATTGGTCTGAGGTCTGCTAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATCCTTTTTTTCTTCAAAAGCCCATTGGTCTGAGGTCTGCTAT  595

seq1  AGTTACAGAAAGCTGAGTAACACAGGTATTAGTGTAATCAGTGCCTGAGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGAAAGCTGAGTAACACAGGTATTAGTGTAATCAGTGCCTGAGC  645

seq1  TGATTGGATAAATGGTCTCAAAAATATACCACAGAGACATGAAGCACTCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGATAAATGGTCTCAAAAATATACCACAGAGACATGAAGCACTCT  695

seq1  AAGGCTTATTTCTTGAGAAGTCAGACAGAAGGCATATAAACAAAACTATA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTATTTCTTGAGAAGTCAGACAGAAGGCATATAAACAAAACTATA  745

seq1  AAGAAAGAAGAAAAAGAAATAAAAAGTGACAGTATATGTTATTGTACTAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAGAAAAAGAAATAAAAAGTGACAGTATATGTTATTGTACTAC  795

seq1  TAAATGGTTCTCATTTATGAATATTGTAATCTCATGAAATAAGAATGTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTTCTCATTTATGAATATTGTAATCTCATGAAATAAGAATGTTT  845

seq1  TAATACTTTTCCTCCATAGATAAACATGTCCCATTCACAAGTATACAACT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTTTCCTCCATAGATAAACATGTCCCATTCACAAGTATACAACT  895

seq1  TGGCTAGTGGACATACAGTATTAACTAACAAAGTAAGCATTTATATTTTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGTGGACATACAGTATTAACTAACAAAGTAAGCATTTATATTTTT  945

seq1  CACTGATTATAATAGTAATACCTTCTTTTATTTTAACATACATCTTAATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATTATAATAGTAATACCTTCTTTTATTTTAACATACATCTTAATA  995

seq1  TTCACACTTGTAATAAAATATAACTCCCCTAGCAAATATTAAGTAGATGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTTGTAATAAAATATAACTCCCCTAGCAAATATTAAGTAGATGA  1045

seq1  ATGATATTAAATATGAGGAGGATCAACTGTAGCACATAGGAGGAAAAGGG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTAAATATGAGGAGGATCAACTGTAGCACATAGGAGGAAAAGGG  1095

seq1  TAAATAAAAAAGGAGCCACTTTGAAAGCAATTTAGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAAAGGAGCCACTTTGAAAGCAATTTAGAATTC  1135

seq1: chr10_57032733_57032880
seq2: B6Ng01-165F05.g_72_219

seq1  AGAAATAGTCACAGGGGTTCAAGAAGCCCTAATGAAGAGGAAGGTGTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGTCACAGGGGTTCAAGAAGCCCTAATGAAGAGGAAGGTGTATC  50

seq1  TGAGAACTTTATCAAAGAAAGGCAGAAAGAAGAAAATGATAAAGAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACTTTATCAAAGAAAGGCAGAAAGAAGAAAATGATAAAGAAGAGA  100

seq1  GAGAGAGAGAGAAAGGGAGGGAGGGAGGAAGAAAGGGAGGAAGGAAGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAAAGGGAGGGAGGGAGGAAGAAAGGGAGGAAGGAAGG  148