BAC Information

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BAC

Clone NameB6Ng01-165K16
Chromosome10 (Build37)
Map Location 45,424,584 - 45,580,711
singlet/doubletdoublet
Overlap geneHace1
Upstream gene4930431F10Rik, LOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364
Downstream geneLOC664781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165K16.bB6Ng01-165K16.g
ACCDH957663DH957664
length4701,035
definitionDH957663|Mus musculus domesticus DNA, BAC clone: B6Ng01-165K16, 5' end.DH957664|Mus musculus domesticus DNA, BAC clone: B6Ng01-165K16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,424,584 - 45,425,060)(45,579,670 - 45,580,711)
sequence
taaaaagtctttcatatctttatttctttaacggggttatttatatcctg
caaaggcctctatcatcttcatgagatgatattgaagatcatagtgatac
tcttaggtgtgttaggatatccagggtttgttgtggtagaagagctgggt
tctcctggtgtcatactgcactggcttctgttgattatgttcttgagctt
gccttttgccatctggttgtctctggtattggctggcctgatagttcctg
ggtgtcccgggctggagcacgcctcccacgaggcatgcacacctgttggg
tgagaatgggtatgcttattctggattgaaggtggaagtgttggctggaa
agaagatggagctcctgtcggaggagtagagctcacggatgctgggtttg
ccagtggcctgggcatctcacctgtgtgttctggttgaagtatgcctcct
gttaggcgggtggagtgggg
gaattcatcccacttagcggatggctagctctgaagcaaattgcttttga
tgatattttccctcagagcttttcatcctgcgggccttctatttctttga
ataattctaaacatgaatgataattattaagtgactgtttcccgagctgg
tttctacattacacgtggcatagcacaaaatgagatgtggtttgaatgca
tttgggggaataactattcagaggaaaagaggctgagagaaaatggaaga
attttttagtgaaacaattgtcttccggtggtagtgcttaatcccccacc
cccaccccctgggatcccatgtattcctaattttctagaaaaacaaacct
tattgctgcaataaaaatgtaatataaaaattatacatgaactataaaat
cattagtaatctagcttttgtttctacacagctctttgaagaaacaactt
accatctagctaagaaaactctctttgaaccacacagacattaagtgtac
ttttacgagaccctcctgagtgttatggctgaccgctaatccagaacaat
aaagaaaagcaggcattctttctttaacagaggaaaacatttttctttaa
tttaaaagaaataataaaatgggctttagactacacttgaatcctaactc
aaatacttctgcaaataagttcatctctgtgagccctggttttcccacac
gtaaaagctgatgctagatttacattcaaaagcatagacaagccaccagc
tcagaagatggagggccccaaccgacctgagggccacctcaatgccagtt
cctcgttacattgtgcctcttaagcctgataagcatctgatgttgacaga
aacacaggaactgcattgtgaatgcaccaaagagctagtgactccaaact
gggagacgaaaagtgggacggcatttccaatcagtgttatttatcgtctt
gccaatataaaataatctggtccttaggaacatttgacttttcgaaagag
aaagaaatagatgttacttggactttaacattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45424584_45425060
seq2: B6Ng01-165K16.b_41_516

seq1  GAATTCTAAAAAGTCTTTCATATCTTTATTTCTTTAACGGGGTTATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAAAGTCTTTCATATCTTTATTTCTTTAACGGGGTTATTTAT  50

seq1  ATCCTGCAAAGGCCTCTATCATCTTCATGAGATGAGATTGAAGATCATAG  100
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATCCTGCAAAGGCCTCTATCATCTTCATGAGATGATATTGAAGATCATAG  100

seq1  TGATACTCTTAGGTGTGTTAGGATATCCAGGGTTTGTTGTGGTAGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTCTTAGGTGTGTTAGGATATCCAGGGTTTGTTGTGGTAGAAGAG  150

seq1  CTGGGTTCTCCTGGTGTCATACTGCACTGGCTTCTGTTGATTATGTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCTCCTGGTGTCATACTGCACTGGCTTCTGTTGATTATGTTCTT  200

seq1  GAGCTTGCCTTTTGCCATCTGGTTGTCTCTGGTATTGGCTGGCCTGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGCCTTTTGCCATCTGGTTGTCTCTGGTATTGGCTGGCCTGATAG  250

seq1  TTCCTGGGTGTCCCGGGTTGGAGCAGGCCTCCCAGGAGGCAGGCAGAGCT  300
      ||||||||||||||||| ||||||| |||||||| |||||| ||| | ||
seq2  TTCCTGGGTGTCCCGGGCTGGAGCACGCCTCCCACGAGGCATGCACACCT  300

seq1  GTTGGGTGAGAATGGGTATGCTTATTCTGGATTGAAGGTGGAAGTGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTGAGAATGGGTATGCTTATTCTGGATTGAAGGTGGAAGTGTTGG  350

seq1  CTGGAAAGAAGATGGAGCTCCTGTCGGGTGGAGTAGAGCTCAGGGATGCT  400
      ||||||||||||||||||||||||| || ||||||||||||| |||||||
seq2  CTGGAAAGAAGATGGAGCTCCTGTC-GGAGGAGTAGAGCTCACGGATGCT  399

seq1  GGGTTTGCCAGGGGCCTGGGCATCTCACCTGTGTGTTCTGGTTGAAGTAG  450
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  GGGTTTGCCAGTGGCCTGGGCATCTCACCTGTGTGTTCTGGTTGAAGTAT  449

seq1  GCCTCCTGGTAGGTGGGTGGAGTGGGG  477
      |||||||| |||| |||||||||||||
seq2  GCCTCCTGTTAGGCGGGTGGAGTGGGG  476

seq1: chr10_45579670_45580711
seq2: B6Ng01-165K16.g_70_1104 (reverse)

seq1  AAAAATGTTTAAAGT-CAAGTAACATTCTTTTTCTTTCTCTTTCAGAAAG  49
      ||||||| ||||||| ||||||||| ||| ||||||||||||||  ||||
seq2  AAAAATG-TTAAAGTCCAAGTAACA-TCTATTTCTTTCTCTTTCGAAAAG  48

seq1  TCAAATGTTCCTTAAGAACCAGATTATTTTATATTGGCAAGAACGATTAA  99
      ||||||||||| |||| |||||||||||||||||||||||| |||| |||
seq2  TCAAATGTTCC-TAAGGACCAGATTATTTTATATTGGCAAG-ACGA-TAA  95

seq1  AATACACTGATTGGAAAATGCCGT-CCACTTTTCTGTCTCCCAGTTTGGA  148
      |  ||||||||||| ||||||||| ||||||||| |||||||||||||||
seq2  ATAACACTGATTGG-AAATGCCGTCCCACTTTTC-GTCTCCCAGTTTGGA  143

seq1  GTCACTAGCTCTTTGGTGCATTCACAATGCAGTTCCTGTGTTTCTTGTCA  198
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTCACTAGCTCTTTGGTGCATTCACAATGCAGTTCCTGTGTTTC-TGTCA  192

seq1  ACATCAGATGCTGAATCAGGCTTAAGAGGCACAAAGGAACAGGAAACTGG  248
      ||||||||||||  |||||||||||||||||||| | |||  | ||||||
seq2  ACATCAGATGCT-TATCAGGCTTAAGAGGCACAATGTAACGAGGAACTGG  241

seq1  CATTGAGGTGGCCCTCA-GACGGTTGGGGCCCTCCATCTTCTGAGCTGGT  297
      ||||||||||||||||| | ||||||||||||||||||||||||||||||
seq2  CATTGAGGTGGCCCTCAGGTCGGTTGGGGCCCTCCATCTTCTGAGCTGGT  291

seq1  GGCTTGGCTATGCTTTTGAATGTAATTCTAGCATCAGCTTTTACGTGTGG  347
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  GGCTTGTCTATGCTTTTGAATGTAAATCTAGCATCAGCTTTTACGTGTGG  341

seq1  GAAAACCAGGGCTCACAGAGATGAACTAATTTGCAGAAGTATTTGAGCTA  397
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  GAAAACCAGGGCTCACAGAGATGAACTTATTTGCAGAAGTATTTGAGTTA  391

seq1  GGATTCAAGTGTAGTCTAAAGCCCATTTTATTATTTCTTTTAAATTAAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAAGTGTAGTCTAAAGCCCATTTTATTATTTCTTTTAAATTAAAG  441

seq1  AAAAATGTTTTCCTCTGTTAAAGAAAGAATGCCTGCTTTTCTTTATTGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTTTTCCTCTGTTAAAGAAAGAATGCCTGCTTTTCTTTATTGTT  491

seq1  CTGGATTAGCGGTCAGCCATAACACTCAGGAGGGTCTCGTAAAAGTACAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTAGCGGTCAGCCATAACACTCAGGAGGGTCTCGTAAAAGTACAC  541

seq1  TTAATGTCTGTGTGGTTCAAAGAGAGTTTTCTTAGCTAGATGGTAAGTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTCTGTGTGGTTCAAAGAGAGTTTTCTTAGCTAGATGGTAAGTTG  591

seq1  TTTCTTCAAAGAGCTGTGTAGAAACAAAAGCTAGATTACTAATGATTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTCTTCAAAGAGCTGTGTAGAAACAAAAGCTAGATTACTAATGATTTTA  641

seq1  TTGTTCATGTATAATTTTTAAATTACATTTTTATTGCAGCAATAAGGTTT  697
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAGTTCATGTATAATTTTTATATTACATTTTTATTGCAGCAATAAGGTTT  691

seq1  GTTTTTCTAGAAAATTAGGAATACATGGGATCCCAGGGGGTGGGGGTGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTAGAAAATTAGGAATACATGGGATCCCAGGGGGTGGGGGTGGG  741

seq1  GGATTATGCACTACCACCCGAAGACAATTGTTTCATTAAAAAATTCTTAC  797
      |||||| ||||||||||| |||||||||||||||| |||||||||||| |
seq2  GGATTAAGCACTACCACCGGAAGACAATTGTTTCACTAAAAAATTCTTCC  791

seq1  ATTTTCTCTCAGCCTCTTTTCCTCTGAATAGTTATTCCCCCAAATGCATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTCAGCCTCTTTTCCTCTGAATAGTTATTCCCCCAAATGCATT  841

seq1  CAAACCACATCTCATTTTGTGCTATGCCACGTGTAATGTAGAAACCAGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCACATCTCATTTTGTGCTATGCCACGTGTAATGTAGAAACCAGCT  891

seq1  CGGGAAATAGTCACTTAATAATTATCATTCATGTTTAGAATTATTAAAAG  947
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  CGGGAAACAGTCACTTAATAATTATCATTCATGTTTAGAATTATTCAAAG  941

seq1  AAATAGAAGGGCCGTAGGATGAAAAGCTTTGAGGGAAAATCTCATCTGAA  997
      |||||||||| ||| ||||||||||||| ||||||||||| |||||  ||
seq2  AAATAGAAGGCCCGCAGGATGAAAAGCTCTGAGGGAAAATATCATC-AAA  990

seq1  AGCAATTTGCTTCAGAGCGAGCCATTTGCTATGTGGGATGAATTC  1042
      |||||||||||||||||| ||||||  |||| |||||||||||||
seq2  AGCAATTTGCTTCAGAGCTAGCCATCCGCTAAGTGGGATGAATTC  1035