BAC Information

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BAC

Clone NameB6Ng01-165M15
Chromosome10 (Build37)
Map Location 122,861,698 - 123,024,740
singlet/doubletdoublet
Overlap geneAI851790
Upstream geneAvpr1a, Ppm1h, D630033A02Rik, Mon2, Usp15, LOC100042958
Downstream gene4930503E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165M15.bB6Ng01-165M15.g
ACCDH957755DH957756
length1,0161,045
definitionDH957755|Mus musculus domesticus DNA, BAC clone: B6Ng01-165M15, 5' end.DH957756|Mus musculus domesticus DNA, BAC clone: B6Ng01-165M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,861,698 - 122,862,684)(123,023,704 - 123,024,740)
sequence
gaattcagtggtgagcagtaagctcagcaaaagggatggaggagggagaa
ggcttggtgagagagtggagagttatgcaatttcttcctgagaaatttat
gtctgtcatatatagcatggcttagtttcatttcttttcaaaattgggac
ataaaatgcagtcatggtagaaaagataggtgggagaaacagaatttctt
gggacctggtatgtaaaagcatgaaagtctgaggggccaagtaaatatct
tggcgtttaatttctccccttcctttgcttatgcctaaaggttaaaagtt
ttctgagatagggtctcatttattagcctagactagcctccaagtcatag
caatttttctatctcatcaaccccaaccaaccatttatttggaatggata
taaataaaagtaatgatttatactgagatttctggggagatttataaatt
taaatttctaaatctaaaatttttcagaagtctagtacacagagataaag
aacaaaccgtgggtaccaagtatactgggatagaaggtaggaaaaatggg
aagatgttggtcaaaagcaaagtactagatacaattattatagtgcaagt
aattggatcataaatgcgagccattttgcttcacttcttttaaaactctt
tactgcatatgttaaggtttatcatatatgtatgtctcatataatatgta
gtatacattatataataaatacataatatataatataatatgtaaattat
atataatataatgtctctctatgtaattatacataggatagtctatataa
ttaagcatataatataatataatttctctatataattatatatatatgtt
taacttatatatagacatatatataattaatgttgtccttcattcttcat
tccatgttatttttgtagtaaaacaaggatacatggatttttcagcaaag
aactctgaataccggatcctttaactattatattaaaaaaaaaataacca
acatagctctcccggt
gaattcaccacaaattctctttcagtattgaaatacacatatgtatatga
catgtacagaaagatctagacatataaaagatagattgaggatagatatt
aaacagatatagatggatataaaatacaaggcaggctggagaaacgactt
ggtagtattaaagtgcttcctttttttctttttaacaaaagagtaagttt
caactcctactgctcactggacagctcactgccacttataactccatctc
cactggatctgatgccttcttctgtcctcaacagacaactacactcgcgt
gtgcatggtcctacacaagagaacatgcatacaacacataataacaacaa
aaataaatctttgttgtaattttaaaagtacacgtgtatgcttatgttga
atgcataagagtatataataataaattcagaaagaatttaaattctacca
cctttactatgctttataaaatctaggagaagggcattctagtttaatca
gttttctattactattaatttttttaatcaatgtcacatatctatcatca
cactgtagtatttgaaaccatactatcaagcacattgaactgaaacagtt
gttttaaatgtgtagaattcttgctctacttgccttatgatgaacgtatc
ttacatagtttttatcccattcttcacaatagtgctattttggtggtcac
agaaaactactgattttattcctagcagcacatagagaaaattgtcagat
ttctgtaatgcctttgccacctacaggttgaaatgttatgagaaatgtat
tatcatttaaatgatgtctccagaaatatacaatagtctaaggttccaag
ctctaatactcaaactcacacacacacacacacatacacacacacacaca
cacacacacacacacacacacacacacacaccacagccattaagcaaaaa
tcaaagccatcttaggaaatctaggagcattaaggaagacatttgagggg
gatgaagaaaggagtctgcattatctgcctcaatctgcttctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_122861698_122862684
seq2: B6Ng01-165M15.b_45_1035

seq1  GAATTCAGTGGTGAGCAGTAAGCTCAGCAAAAGGGATGGAGGAGGGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGTGAGCAGTAAGCTCAGCAAAAGGGATGGAGGAGGGAGAA  50

seq1  GGCTTGGTGAGAGAGTGGAGAGTTATGCAATTTCTTCCTGAGAAATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGTGAGAGAGTGGAGAGTTATGCAATTTCTTCCTGAGAAATTTAT  100

seq1  GTCTGTCATATATAGCATGGCTTAGTTTCATTTCTTTTCAAAATTGGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCATATATAGCATGGCTTAGTTTCATTTCTTTTCAAAATTGGGAC  150

seq1  ATAAAATGCAGTCATGGTAGAAAAGATAGGTGGGAGAAACAGAATTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGCAGTCATGGTAGAAAAGATAGGTGGGAGAAACAGAATTTCTT  200

seq1  GGGACCTGGTATGTAAAAGCATGAAAGTCTGAGGGGCCAAGTAAATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTGGTATGTAAAAGCATGAAAGTCTGAGGGGCCAAGTAAATATCT  250

seq1  TGGCGTTTAATTTCTCCCCTTCCTTTGCTTATGCCTAAAGGTTAAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGTTTAATTTCTCCCCTTCCTTTGCTTATGCCTAAAGGTTAAAAGTT  300

seq1  TTCTGAGATAGGGTCTCATTTATTAGCCTAGACTAGCCTCCAAGTCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGATAGGGTCTCATTTATTAGCCTAGACTAGCCTCCAAGTCATAG  350

seq1  CAATTTTTCTATCTCATCAACCCCAACCAACCATTTATTTGGAATGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTCTATCTCATCAACCCCAACCAACCATTTATTTGGAATGGATA  400

seq1  TAAATAAAAGTAATGATTTATACTGAGATTTCTGGGGAGATTTATAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAGTAATGATTTATACTGAGATTTCTGGGGAGATTTATAAATT  450

seq1  TAAATTTCTAAATCTAAAATTTTTCAGAAGTCTAGTACACAGAGATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCTAAATCTAAAATTTTTCAGAAGTCTAGTACACAGAGATAAAG  500

seq1  AACAAACCGTGGGTACCAAGTATACTGGGATAGAAGGTAGGAAAAATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCGTGGGTACCAAGTATACTGGGATAGAAGGTAGGAAAAATGGG  550

seq1  AAGATGTTGGTCAAAAGCAAAGTACTAGATACAATTATTATAGTGCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTTGGTCAAAAGCAAAGTACTAGATACAATTATTATAGTGCAAGT  600

seq1  AATTGGATCATAAATGCGAGCCATTTTGCTTCACTTCTTTTAAAACTC-T  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATTGGATCATAAATGCGAGCCATTTTGCTTCACTTCTTTTAAAACTCTT  650

seq1  TACTGCATATGTTAAGGTTTATCATATATGTATGTCTCATATAATATGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCATATGTTAAGGTTTATCATATATGTATGTCTCATATAATATGTA  700

seq1  GTATACATTATATAATAAATACATAATATATAATATAATATGTAAATTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACATTATATAATAAATACATAATATATAATATAATATGTAAATTAT  750

seq1  ATATAATATAATGTCTCTCTATGTAATTATACATAGGATAGTCTATATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATAATGTCTCTCTATGTAATTATACATAGGATAGTCTATATAA  800

seq1  TTAAGCATATAATATAATATAATTTCTCTATATAATTATATATATATGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCATATAATATAATATAATTTCTCTATATAATTATATATATATGTT  850

seq1  TAACTTATATATAGACATATATATAATTAATG-TGTCCTTCATTCTTCAT  898
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAACTTATATATAGACATATATATAATTAATGTTGTCCTTCATTCTTCAT  900

seq1  TCCATGTTATTTTTGTAGTAAAACAGGAATACATG--ATTTTCAGCAAAG  946
      ||||||||||||||||||||||||| | |||||||   ||||||||||||
seq2  TCCATGTTATTTTTGTAGTAAAACAAGGATACATGGATTTTTCAGCAAAG  950

seq1  -ACTCTGAATACAGTATTCATTAACTATTAATATTAAAAAAA  987
       ||||||||||| | || | ||||||||| ||||||||||||
seq2  AACTCTGAATACCGGATCCTTTAACTATT-ATATTAAAAAAA  991

seq1: chr10_123023704_123024740
seq2: B6Ng01-165M15.g_69_1113 (reverse)

seq1  TGCAGAAGCAGA-TGA-GCAG-TAATGCAGAGCTCC-TTCTTCAT-CACC  45
      |||||||||||| ||| |||| ||||||||| |||| |||||||| | ||
seq2  TGCAGAAGCAGATTGAGGCAGATAATGCAGA-CTCCTTTCTTCATCCCCC  49

seq1  TCAAATGTCTTCCTT-ATGCTCCTAGATATCCT-AGATGGCTTTGTTTTT  93
      ||||||||||||||| |||||||||||| |||| ||||||||||| ||||
seq2  TCAAATGTCTTCCTTAATGCTCCTAGATTTCCTAAGATGGCTTTGATTTT  99

seq1  TGCTTTATGGCTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  143
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAATGGCTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  149

seq1  TGTGTGTGTGTATGTGTGTGTGTGTGTGTGAGTTTGAGTATTAGAGCTTG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTATGTGTGTGTGTGTGTGTGAGTTTGAGTATTAGAGCTTG  199

seq1  GAACCTTAGACTATTGTATATTTCTGGAGACATCATTTAAATGATAATAC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTAGACTATTGTATATTTCTGGAGACATCATTTAAATGATAATAC  249

seq1  ATTTCTCATAACATTTCAACCTGTAGGTGGCAAAGGCATTACAGAAATCT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCATAACATTTCAACCTGTAGGTGGCAAAGGCATTACAGAAATCT  299

seq1  GACAATTTTCTCTATGTGCTGCTAGGAAT-AAATCAGTAGTTTTCTGTGA  342
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GACAATTTTCTCTATGTGCTGCTAGGAATAAAATCAGTAGTTTTCTGTGA  349

seq1  CCACCAAAATAGCACTATTGTGAAGAATGGGAT-AAAACTATGTAAGATA  391
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCACCAAAATAGCACTATTGTGAAGAATGGGATAAAAACTATGTAAGATA  399

seq1  CGTTCATCATAAGGCAAGTAGAGCAAGAATTCTACACATTTAAAACAACT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCATCATAAGGCAAGTAGAGCAAGAATTCTACACATTTAAAACAACT  449

seq1  GTTTCAGTTCAATGTGCTTGATAGTATGGTTTCAAATACTACAGTGTGAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGTTCAATGTGCTTGATAGTATGGTTTCAAATACTACAGTGTGAT  499

seq1  GATAGATATGTGACATTGATTAAAAAAATTAATAGTAATAGAAAACTGAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATATGTGACATTGATTAAAAAAATTAATAGTAATAGAAAACTGAT  549

seq1  TAAACTAGAATGCCCTTCTCCTAGATTTTATAAAGCATAGTAAAGGTGGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTAGAATGCCCTTCTCCTAGATTTTATAAAGCATAGTAAAGGTGGT  599

seq1  AGAATTTAAATTCTTTCTGAATTTATTATTATATACTCTTATGCATTCAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAAATTCTTTCTGAATTTATTATTATATACTCTTATGCATTCAA  649

seq1  CATAAGCATACACGTGTACTTTTAAAATTACAACAAAGATTTATTTTTGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCATACACGTGTACTTTTAAAATTACAACAAAGATTTATTTTTGT  699

seq1  TGTTATTATGTGTTGTATGCATGTTCTCTTGTGTAGGACCATGCACACGC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTATGTGTTGTATGCATGTTCTCTTGTGTAGGACCATGCACACGC  749

seq1  GAGTGTAGTTGTCTGTTGAGGACAGAAGAAGGCATCAGATCCAGTGGAGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTAGTTGTCTGTTGAGGACAGAAGAAGGCATCAGATCCAGTGGAGA  799

seq1  TGGAGTTATAAGTGGCAGTGAGCTGTCCAGTGAGCAGTAGGAGTTGAAAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTATAAGTGGCAGTGAGCTGTCCAGTGAGCAGTAGGAGTTGAAAC  849

seq1  TTACTCTTTTGTTAAAAAGAAAAAAAGGAAGCACTTTAATACTACCAAGT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTTTTGTTAAAAAGAAAAAAAGGAAGCACTTTAATACTACCAAGT  899

seq1  CGTTTCTCCAGCCTGCCTTGTATTTTATATCCATCTATATCTGTTTAATA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCTCCAGCCTGCCTTGTATTTTATATCCATCTATATCTGTTTAATA  949

seq1  TCTATCCTCAATCTATCTTTTATATGTCTAGATCTTTCTGTACATGTCAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCCTCAATCTATCTTTTATATGTCTAGATCTTTCTGTACATGTCAT  999

seq1  ATACATATGTGTATTTCAATACTGAAAGAGAATTTGTGGTGAATTC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATGTGTATTTCAATACTGAAAGAGAATTTGTGGTGAATTC  1045