MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-166H05
Chromosome	10 (Build37)
Map Location	5,037,036 - 5,187,052
singlet/doublet	doublet
Overlap gene	Syne1
Upstream gene	Rgs17, Mtrf1l, Fbxo5, LOC666395, Vip, Myct1
Downstream gene	Esr1, LOC100041310, Gm221, 1700052N19Rik, Rmnd1, Zbtb2, Akap12
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rgs17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56533 MGI:1927469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtrf1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108853 MGI:1918830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxo5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67141 MGI:1914391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666395 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666395
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 174 ESTs, 2 Proteins pseudo : _no_value

name	Vip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22353 MGI:98933
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myct1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68632 MGI:1915882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Syne1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64009 MGI:1927152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Esr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13982 MGI:1352467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041310 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041310
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Gm221 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237250 MGI:2685067
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	1700052N19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73419 MGI:1920669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rmnd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66084 MGI:1913334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Zbtb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381990 MGI:2685949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83397 MGI:1932576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgs17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388938 GeneID:56533 MGI:1927469
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 17 transcript_id : NM_019958.3

name	Mtrf1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89363036 GeneID:108853 MGI:1918830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial translational release factor 1-like transcript_id : NM_175374.3

name	Fbxo5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110225373 GeneID:67141 MGI:1914391
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 5 transcript_id : NM_025995.2

name	Vip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365020 GeneID:22353 MGI:98933
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vasoactive intestinal polypeptide transcript_id : NM_011702.2

name	Myct1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22094130 GeneID:68632 MGI:1915882
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myc target 1 transcript_id : NM_026793.1

name	Syne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120858 GeneID:64009 MGI:1927152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptic nuclear envelope 1 transcript_id : NM_153399.2

name	Syne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120864 GeneID:64009 MGI:1927152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptic nuclear envelope 1 transcript_id : NM_001079686.1

name	Syne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120815 GeneID:64009 MGI:1927152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptic nuclear envelope 1 transcript_id : NM_022027.2

name	Esr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227255 GeneID:13982 MGI:1352467
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : estrogen receptor 1 (alpha) transcript_id : NM_007956.3

name	Gm221 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260617 GeneID:237250 MGI:2685067
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : gene model 221, (NCBI) transcript_id : XM_136914.7

name	1700052N19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90093342 GeneID:73419 MGI:1920669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700052N19 gene transcript_id : NM_024261.2

name	Rmnd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350341 GeneID:66084 MGI:1913334
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : required for meiotic nuclear division 1 homolog (S. cerevisiae) transcript_id : NM_025343.4

name	Zbtb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388824 GeneID:381990 MGI:2685949
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 2 transcript_id : NM_001033466.2

name	Akap12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130742 GeneID:83397 MGI:1932576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein (gravin) 12 transcript_id : NM_031185.2

name	Rgs17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910532 CCDS:CCDS23672.1 GeneID:56533 MGI:1927469
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 note : regulator of G-protein signaling Z2 product : regulator of G-protein signaling 17 protein_id : NP_064342.1

name	Mtrf1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425080 CCDS:CCDS23673.1 GeneID:108853 MGI:1918830
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0016149 - translation release factor activity, codon specific [Evidence IEA] codon_start : 1 product : mitochondrial translational release factor 1-like protein_id : NP_780583.1

name	Fbxo5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110225374 GeneID:67141 MGI:1914391
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0000089 - mitotic metaphase [Evidence IDA]; GO:0001556 - oocyte maturation [Evidence IMP] [Evidence IDA] codon_start : 1 note : f-box only protein 31 product : F-box only protein 5 protein_id : NP_080271.2

name	Vip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794516 CCDS:CCDS23674.1 GeneID:22353 MGI:98933
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 note : PHI, peptide histidine isoleucine product : vasoactive intestinal polypeptide protein_id : NP_035832.1

name	Myct1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22094131 CCDS:CCDS23675.1 GeneID:68632 MGI:1915882
definition	codon_start : 1 product : myc target in myeloid cells 1 protein_id : NP_081069.1

name	Syne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120859 CCDS:CCDS23676.1 GeneID:64009 MGI:1927152
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] [Evidence IDA]; GO:0030017 - sarcomere [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; nesprin 1; enaptin165 product : synaptic nuclear envelope 1 isoform 1 protein_id : NP_700448.2

name	Syne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120865 GeneID:64009 MGI:1927152
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] [Evidence IDA]; GO:0030017 - sarcomere [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; nesprin 1; enaptin165 product : synaptic nuclear envelope 1 isoform 3 protein_id : NP_001073154.1

name	Syne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120816 GeneID:64009 MGI:1927152
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] [Evidence IDA]; GO:0030017 - sarcomere [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; nesprin 1; enaptin165 product : synaptic nuclear envelope 1 isoform 2 protein_id : NP_071310.2

name	Esr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679695 CCDS:CCDS23677.1 GeneID:13982 MGI:1352467
definition	GO_component : GO:0016585 - chromatin remodeling complex [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030284 - estrogen receptor activity [Evidence ISS]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IDA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030235 - nitric-oxide synthase regulator activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016049 - cell growth [Evidence NAS]; GO:0030520 - estrogen receptor signaling pathway [Evidence ISS]; GO:0045839 - negative regulation of mitosis [Evidence NAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : estrogen receptor alpha product : estrogen receptor 1 (alpha) protein_id : NP_031982.1

name	Gm221 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260618 GeneID:237250 MGI:2685067
definition	codon_start : 1 product : hypothetical protein protein_id : XP_136914.7

name	1700052N19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90093343 GeneID:73419 MGI:1920669
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC73419 protein_id : NP_077223.2

name	Rmnd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198296 CCDS:CCDS23678.1 GeneID:66084 MGI:1913334
definition	codon_start : 1 exception : mismatches in translation product : required for meiotic nuclear division 1 homolog protein_id : NP_079619.3

name	Zbtb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701993 CCDS:CCDS23679.1 GeneID:381990 MGI:2685949
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ZBTB2-like product : zinc finger and BTB domain containing 2 protein_id : NP_001028638.1

name	Akap12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13626040 CCDS:CCDS23680.1 GeneID:83397 MGI:1932576
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0030159 - receptor signaling complex scaffold activity [Evidence TAS] GO_process : GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 note : gercelin; v-src suppressed transcript 5; testis specific gene A12 product : A kinase (PRKA) anchor protein (gravin) 12 protein_id : NP_112462.1

name	LOC100041310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041310
definition	number : 1 pseudo : _no_value

name	LOC100041310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041310
definition	number : 2 pseudo : _no_value

name	LOC666395 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260616 GeneID:666395
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 174 ESTs, 2 Proteins product : similar to Ribosomal protein L17 pseudo : _no_value transcript_id : XR_032550.1

clone name	MSMg01-232N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-166H05.b	B6Ng01-166H05.g
ACC	DH958231	DH958232
length	1,130	1,203
definition	DH958231\|Mus musculus domesticus DNA, BAC clone: B6Ng01-166H05, 5' end.	DH958232\|Mus musculus domesticus DNA, BAC clone: B6Ng01-166H05, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(5,037,036 - 5,038,176)	(5,185,820 - 5,187,052)
sequence	gaattcctagctggtgagtgtgctttccgtcctcccagattttcacgaaa ttgagctttgtatttagtttatagaagcagacttaaggcagaagctggaa cacgccaaagaaatcaccgaggaagcaaggggaaccctgaaggatttcac ggctcagaggacccaagtggagagatttgtcaaggacatcacagcgtggc tgatcaatgtggaggaatcattgaccagatgtgcccaaaccgagacttgc gaagggctgaagaaagccaaggtgggtcaaaaactattctattattaatt ctcctgttttacaactatgataaagatataatatctcctttcaattattc atattaaaagtattaacacccagactgactcataatatgagaaaaatata gagtttatatatagtgtgtgtatatataaaaagaattattttttattata catatatataagtacattgtagctgtcttcagacacaccagaagacagcg tcaggtattataggtggttgtgagtcaccatatggttgctgggaattgaa ctcaggacctctcgaagagtagtcaatgctcttaactgctgagccatctc tccaactcgactttgtatcaatttttaagcttgaacctcaagtagttttt catcgcgtcactatccatgtttttaatttggacatgctcatctgaagaac tctgtgatttttttcattttttattagatattttctttatatacatttca aatttcaaatgctatccctatacccccccccccgccctgctcccctcctc acccactcctgcttcttggccctggcattcccctgtactgggcatataaa gtttgcaataccaagggacctctcttcccagtgatggctgactaggccat cttctgctacatatgcagctagagatatgagctccagggtactggttagt tcatattgtgttccacctatagggtacagatctctttagctccttgggta ctttctctagatctcattgggggccctgcattccatacatagatgactgt gagcatcactttttatttgccagcactgctagctcatacgtgacagctat attcaaggtcccttcagttaaaggtttctg	gaattccaagctggttttccttcttagccttagaaataaccgggaacttg acagaaggtgtgaactggactcagttacactgaagggcgatttttcttga cagaaggtgtgaactggactcagttacactgaagggcgatttttctaagg agtttgtataaccattgaagaattccgaagtggttcaagatcttgaacca ctcttttaaagttaatcttcacagaaagctaccatgcaagacagatttct ttttacacgagtttaatatttgaaagagcaactaaagcaacttgtagatg tttatctgttgtctgggctctagccaacgctgaaggccaaggagaaggga gcaaaaaacaacagcaacattttttttttctttttaaccacaagaaactt gcacaagattcccatagctcttttgtggaaccgactgtctgccaagcaga cggcactcactagctgtctccttctcaaaagcagagatataaataaaggg cttgagaaactgtagatgtgcgaatgcctcagagctgcttagtgggtagt gagagaaaagacacgctgctctactagcctagacgagcgtccccttcatt tggggctttgctgctgatgtattttaaagaccttatcacggatctttcta aacttggtggacggtagcaattatttcagctttcacagatttggggagac ctaaatgtcaaaactacgcatcccataatatctgcaatatatcaacactc agaatcacggagtcagtgttgagtaaactacaaaaacactttagtagcca catctgttatctccagtgatccatttgaatacaatgtgttgtttcaattc acaatgttcctcagcttccacatgtaagatttctgataccatgttgtaat ttttttcttgatgctagtaggtactcctgccttttcaattatttgacatt ataaataatatcttatacatctttctaacatctactcttttttatatatt ttgctgaaacaggtttagaatcagaacaagcacagagaaagagccaagag aaaacagcaagactgcactcagaaactcagtctttactgacctagaacaa agtgcttccgagctgaggtgcttgccacaccttgatccagcactttggaa cggccagggattctgtaattaggccgcctcactctatagagtgtcctagg gaa
quality values	Open. Hide. 61 47 45 33 61 61 61 61 61 61 61 61 61 61 55 61 61 61 47 40 49 59 61 61 61 61 38 38 32 27 32 33 43 32 33 59 43 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 61 59 59 55 59 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 55 55 61 61 61 61 61 61 61 61 59 61 59 61 59 61 59 55 55 59 61 61 61 61 61 61 61 43 61 59 61 59 59 61 59 55 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 53 61 61 61 61 61 47 61 61 61 40 61 61 61 61 53 57 57 53 52 57 53 40 57 57 57 57 57 53 57 47 38 57 45 53 57 47 57 53 45 57 53 57 53 57 57 57 57 53 57 50 57 57 57 57 57 57 30 57 53 50 57 53 57 57 57 53 47 25 53 57 57 52 57 57 52 57 57 57 57 53 52 53 53 53 57 53 57 57 57 47 45 52 38 53 57 57 47 57 52 47 57 53 47 45 57 52 53 53 50 53 57 57 57 53 53 40 53 52 40 52 53 53 53 43 52 53 50 53 47 43 42 53 57 45 57 57 57 50 52 53 37 57 57 57 37 53 42 42 53 43 53 57 50 38 53 53 53 41 52 52 30 53 53 30 53 44 53 52 38 53 35 16 57 57 57 57 57 31 42 36 36 57 57 57 57 37 50 30 25 14 10 37 28 44 42 43 41 40 48 41 57 39 37 40 40 47 30 39 32 40 57 44 39 25 57 53 24 57 37 41 24 57 40 37 53 29 40 44 47 40 57 47 40 44 36 40 37 57 57 57 57 57 57 57 57 57 44 37 30 57 44 28 53 34 41 24 57 57 32 46 28 36 31 29 43 28 51 41 36 32 48 32 44 30 40 30 30 47 27 36 30 44 24 21 46 38 29 27 31 25 35 38 44 29 46 46 41 37 48 23 37 29 37 48 47 30 28 34 33 34 33 34 51 33 31 24 51 37 29 26 28 26 28 29 30 36 24 9 8 39 19 29 18 30 33 31 33 38 29 36 29 51 29 28 31 34 35 33 31 29 32 23 33 30 34 22 26 26 33 21 30 23 27 26 29 39 27 33 29 29 29 26 17 31 31 28 28 31 35 28 24 24 28 27 24 34 35 23 23 15 20 30 24 34 13 30 30 22 29 25 46 44 27 17 26 28 20 31 27 11 19 31 27 23 20 18 13 26 23 19 20 36 30 9 15 22 28 23 17 12 30 24 28 28 23 21 51 9 11 10 12 6 19 15 15 23 22 30 25 39 26 23 19 26 22 9 29 15 17 19 28 29 19 25 12 22 44 14 17 23 21 17 21 9 21 8 30 13 19 16 21 9 19 26 29 33 25 7 34 16 26 29 23 15 29 22 14 23 16 23 10 16 29 10 19 12 29 22 18 29 18 23 21 6 7 7 5 27 7 7 14 3 6 23 20 11 6 3 2 4 30 25 23 14 19 7 12 2 2 11 5 13 4 2 2 4 7 4 8 5 11 10 16 5 5 7 5 11 6 9 14 20 9 5 4 9 7 13 11 6 26 18 6 17 20 6 19 10 4 4 3 6 3 18 29 18 6 4 13 20 15 6 4 6	Open. Hide. 61 55 55 49 61 37 36 15 19 19 25 41 30 30 26 36 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 44 59 44 44 59 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 61 43 47 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 47 61 61 61 53 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 53 61 61 61 61 53 47 53 57 53 57 47 57 53 57 53 53 57 47 47 57 53 57 57 53 57 53 53 50 52 53 47 53 57 57 53 57 53 53 50 53 50 53 50 53 57 53 53 30 53 43 38 57 34 57 53 50 53 53 53 47 53 53 50 42 53 53 57 53 57 57 52 30 57 57 53 53 50 57 53 42 53 57 52 38 57 50 45 38 57 57 45 42 41 57 50 47 28 46 52 47 52 53 52 45 53 53 57 50 52 50 45 46 47 50 42 53 57 47 50 53 47 47 37 32 57 38 45 30 35 57 30 53 50 53 52 47 39 53 38 34 46 46 47 33 43 50 53 57 53 42 31 39 44 40 50 30 57 52 57 41 33 47 50 42 42 34 52 36 28 53 48 48 53 31 40 23 57 57 29 42 39 31 53 31 53 30 42 31 57 34 31 34 22 53 33 42 36 48 40 40 30 25 32 41 44 38 28 33 43 37 37 48 29 40 53 40 34 24 57 37 40 39 27 47 28 44 29 21 29 40 31 48 30 48 31 39 30 48 30 30 32 51 32 32 34 35 48 12 46 46 51 27 32 28 33 27 51 32 34 34 39 31 28 34 48 28 29 24 33 33 28 31 13 38 29 29 38 39 29 30 28 29 19 48 32 25 28 33 28 29 51 41 23 27 29 28 28 29 23 31 29 46 22 36 20 31 39 25 51 29 35 28 29 20 29 29 22 29 27 24 28 43 21 33 30 31 28 28 28 21 29 29 29 21 33 29 35 27 30 41 27 31 32 14 35 19 51 27 20 23 30 29 13 20 28 32 25 28 43 19 20 22 19 38 25 29 51 51 38 36 46 28 31 19 21 28 28 19 33 33 33 30 23 19 27 19 27 13 23 29 29 29 32 24 29 17 28 22 51 44 20 24 19 26 19 23 29 19 51 19 19 31 23 22 28 28 28 25 28 38 23 20 30 12 18 26 19 32 13 12 13 11 34 13 13 22 32 19 44 22 16 9 23 12 25 19 22 29 27 17 20 23 19 15 44 44 44 44 10 12 6 7 23 8 15 36 36 27 23 26 29 24 31 36 13 22 4 6 9 5 36 23 17 10 17 23 25 26 4 6 4 5 17 16 25 7 11 7 9 7 4 3 3 7 36 9 10 24 11 14 12 7 9 7 12 7 9 26 27 13 7 20 7 10 20 21 11 23 23 17 12 8 9 7 6 9 5 9 20 9 4 9 15 18 6 22 3 4 5 18 5 4 16 13 8 20 18 18 5 5 19 13 13 6 4 24 16 12 6 20 10 9 10 5 9 4 12 4 7 7 7 1 3 3 1 3 6 4 7 5 8 5 3 11 4 5 16 5 11 8 10 6 8 18 5 10 13 8 10 7 7 6 13 6 1 7 1 4 3 2 4 6 9 3 3 2 3 6 6 4 3 1 1 1 1 13 3 3 12 6 3 3 17 6 7 13 6 6 4 5 6 6 7 9 20 5 16 3 3 3 1 4 9 5 12 24 8 15 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_5037036_5038176
seq2: B6Ng01-166H05.b_44_1173

seq1  GAATTCCTAGCTGGTGAGTGTGCTTTCCGTCCTCCCAGATTTTCACGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCTGGTGAGTGTGCTTTCCGTCCTCCCAGATTTTCACGAAA  50

seq1  TTGAGCTTTGTATTTAGTTTATAGAAGCAGACTTAAGGCAGAAGCTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTTTGTATTTAGTTTATAGAAGCAGACTTAAGGCAGAAGCTGGAA  100

seq1  CACGCCAAAGAAATCACCGAGGAAGCAAGGGGAACCCTGAAGGATTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCAAAGAAATCACCGAGGAAGCAAGGGGAACCCTGAAGGATTTCAC  150

seq1  GGCTCAGAGGACCCAAGTGGAGAGATTTGTCAAGGACATCACAGCGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGAGGACCCAAGTGGAGAGATTTGTCAAGGACATCACAGCGTGGC  200

seq1  TGATCAATGTGGAGGAATCATTGACCAGATGTGCCCAAACCGAGACTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAATGTGGAGGAATCATTGACCAGATGTGCCCAAACCGAGACTTGC  250

seq1  GAAGGGCTGAAGAAAGCCAAGGTGGGTCAAAAACTATTCTATTATTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCTGAAGAAAGCCAAGGTGGGTCAAAAACTATTCTATTATTAATT  300

seq1  CTCCTGTTTTACAACTATGATAAAGATATAATATCTCCTTTCAATTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTTTTACAACTATGATAAAGATATAATATCTCCTTTCAATTATTC  350

seq1  ATATTAAAAGTATTAACACCCAGACTGACTCATAATATGAGAAAAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAAGTATTAACACCCAGACTGACTCATAATATGAGAAAAATATA  400

seq1  GAGTTTATATATAGTGTGTGTATATATAAAAAGAATTATTTTTTATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATATATAGTGTGTGTATATATAAAAAGAATTATTTTTTATTATA  450

seq1  CATATATATAAGTACATTGTAGCTGTCTTCAGACACACCAGAAGACAGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATAAGTACATTGTAGCTGTCTTCAGACACACCAGAAGACAGCG  500

seq1  TCAGGTATTATAGGTGGTTGTGAGTCACCATATGGTTGCTGGGAATTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTATTATAGGTGGTTGTGAGTCACCATATGGTTGCTGGGAATTGAA  550

seq1  CTCAGGACCTCTCGAAGAGTAGTCAATGCTCTTAACTGCTGAGCCATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGACCTCTCGAAGAGTAGTCAATGCTCTTAACTGCTGAGCCATCTC  600

seq1  TCCAACTCGACTTTGTATCAATTTTTAAGCTTGAACCTCAAGTAGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTCGACTTTGTATCAATTTTTAAGCTTGAACCTCAAGTAGTTTTT  650

seq1  CATCGCGTCACTATCCATGTTTTTAATTTGGACATGCTCATCTGAAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGCGTCACTATCCATGTTTTTAATTTGGACATGCTCATCTGAAGAAC  700

seq1  TCTGTGATTTTTTTCATTTTTTATTAGATATTTTCTTTATATACATTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATTTTTTTCATTTTTTATTAGATATTTTCTTTATATACATTTCA  750

seq1  AATTTCAAATGCTATCCCTATACCCCCCCCCCCGCCCTGCTCCCCTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAATGCTATCCCTATACCCCCCCCCCCGCCCTGCTCCCCTCCTC  800

seq1  ACCCACTCCTGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGCATATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCCTGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGCATATAAA  850

seq1  GTTTGCAATACCAAGGGACCTCTCTTCCCAGTGATGGCTGACTAGGCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAATACCAAGGGACCTCTCTTCCCAGTGATGGCTGACTAGGCCAT  900

seq1  CTTCTGCTACATATGCAGCTAGAGATATGAGCTCCAGGGGTACTGGTTAG  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTCTGCTACATATGCAGCTAGAGATATGAGCTCCA-GGGTACTGGTTAG  949

seq1  TTCATATTGTTGTTCCACCTATAGGGTTACAGATCTCTTTAGCTCCTTGG  1000
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  TTCATATTG-TGTTCCACCTATAGGG-TACAGATCTCTTTAGCTCCTTGG  997

seq1  GTACTTTCTCTAGATCCTCCATTGGGGGCCCTGCATTCCATACAATAGAT  1050
      ||||||||||||||||   |||||||||||||||||||||||| ||||||
seq2  GTACTTTCTCTAGATC--TCATTGGGGGCCCTGCATTCCATAC-ATAGAT  1044

seq1  GACTGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCATA  1100
      |||||||||||| ||||||| ||||||||| ||||||   ||| ||||||
seq2  GACTGTGAGCAT-CACTTTT-TATTTGCCA-GCACTG--CTAG-CTCATA  1088

seq1  CGTGACAGCTATA-TCAGGGTCCCTTCAGTAAAAGTTTTCTG  1141
      ||||||||||||| ||| |||||||||||| |||| ||||||
seq2  CGTGACAGCTATATTCAAGGTCCCTTCAGTTAAAGGTTTCTG  1130

seq1: chr10_5185820_5187052
seq2: B6Ng01-166H05.g_66_1268 (reverse)

seq1  TTCCCTAGAACTCACTCTATAGA-TGAGGCTGGCCTCAAATTCACAGAGA  49
      |||||||| |  ||||||||||| |||||| |||||  |||| ||||| |
seq2  TTCCCTAGGA--CACTCTATAGAGTGAGGC-GGCCT--AATT-ACAGA-A  43

seq1  TCCACCTGCCCCTGCTTCCCAAGTGCTGGGATCAAAGGTGTGTGCAGCAC  99
      ||  |||| ||    |||| ||||||| ||||| ||||||||   |||||
seq2  TC--CCTGGCC---GTTCCAAAGTGCT-GGATC-AAGGTGTGGCAAGCAC  86

seq1  CACCCAGCTCGGAAGCACCTTTTGTTCCTAGGGGTCAGTAAAGACCTGAG  149
        | ||||||||||||||  |||||| |||  |||||||||||| |||||
seq2  --CTCAGCTCGGAAGCAC--TTTGTT-CTA--GGTCAGTAAAGA-CTGAG  128

seq1  TGTCTGAGTGCAGTCTTTGCTTGTTTCTCTTGGCTCTTTCTCCTTGTGCT  199
      | ||||||||||||| |||||  |||||||||||||||||||  ||||| 
seq2  TTTCTGAGTGCAGTC-TTGCTGTTTTCTCTTGGCTCTTTCTC--TGTGC-  174

seq1  TTGTTTCCTGATTCTAAACCCTGTTTCAGCAAAATAATATAAAAAAGAGT  249
      |||||  ||||||||||| |||||||||||||||| ||||||||||||||
seq2  TTGTT--CTGATTCTAAA-CCTGTTTCAGCAAAAT-ATATAAAAAAGAGT  220

seq1  AGATGTTAGAAAGATGTTATAAGATATTATTTATAATGTCAAATAATTGA  299
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGATGTTAGAAAGATG-TATAAGATATTATTTATAATGTCAAATAATTGA  269

seq1  AAAGGCAGGAGTACCTACTAGCATCAAGAAAAAAATTACAACATGGTATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGAGTACCTACTAGCATCAAGAAAAAAATTACAACATGGTATC  319

seq1  AGAAATCTTACATGTGGAAGCTGAGGAACATTGTGAATTGAAACAACACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTTACATGTGGAAGCTGAGGAACATTGTGAATTGAAACAACACA  369

seq1  TTGTATTCAAATGGATCACTGGAGATAACAGATGTGGCTACTAAAGTGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCAAATGGATCACTGGAGATAACAGATGTGGCTACTAAAGTGTT  419

seq1  TTTGTAGTTTACTCAACACTGACTCCGTGATTCTGAGTGTTGATATATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTTTACTCAACACTGACTCCGTGATTCTGAGTGTTGATATATTG  469

seq1  CAGATATTATGGGATGCGTAGTTTTGACATTTAGGTCTCCCCAAATCTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTATGGGATGCGTAGTTTTGACATTTAGGTCTCCCCAAATCTGT  519

seq1  GAAAGCTGAAATAATTGCTACCGTCCACCAAGTTTAGAAAGATCCGTGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGAAATAATTGCTACCGTCCACCAAGTTTAGAAAGATCCGTGAT  569

seq1  AAGGTCTTTAAAATACATCAGCAGCAAAGCCCCAAATGAAGGGGACGCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTTAAAATACATCAGCAGCAAAGCCCCAAATGAAGGGGACGCTC  619

seq1  GTCTAGGCTAGTAGAGCAGCGTGTCTTTTCTCTCACTACCCACTAAGCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGCTAGTAGAGCAGCGTGTCTTTTCTCTCACTACCCACTAAGCAG  669

seq1  CTCTGAGGCATTCGCACATCTACAGTTTCTCAAGCCCTTTATTTATATCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGCATTCGCACATCTACAGTTTCTCAAGCCCTTTATTTATATCT  719

seq1  CTGCTTTTGAGAAGGAGACAGCTAGTGAGTGCCGTCTGCTTGGCAGACAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTGAGAAGGAGACAGCTAGTGAGTGCCGTCTGCTTGGCAGACAG  769

seq1  TCGGTTCCACAAAAGAGCTATGGGAATCTTGTGCAAGTTTCTTGTGGTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTCCACAAAAGAGCTATGGGAATCTTGTGCAAGTTTCTTGTGGTTA  819

seq1  AAAAGAAAAAAAAAATGTTGCTGTTGTTTTTTGCTCCCTTCTCCTTGGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAAAAAATGTTGCTGTTGTTTTTTGCTCCCTTCTCCTTGGCC  869

seq1  TTCAGCGTTGGCTAGAGCCCAGACAACAGATAAACATCTACAAGTTGCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCGTTGGCTAGAGCCCAGACAACAGATAAACATCTACAAGTTGCTT  919

seq1  TAGTTGCTCTTTCAAATATTAAACTCGTGTAAAAAGAAATCTGTCTTGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCTCTTTCAAATATTAAACTCGTGTAAAAAGAAATCTGTCTTGCA  969

seq1  TGGTAGCTTTCTGTGAAGATTAACTTTAAAAGAGTGGTTCAAGATCTTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCTTTCTGTGAAGATTAACTTTAAAAGAGTGGTTCAAGATCTTGA  1019

seq1  ACCACTTCGGAATTCTTCAATGGTTATACAAACTCCTTAGAAAAATCGCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTCGGAATTCTTCAATGGTTATACAAACTCCTTAGAAAAATCGCC  1069

seq1  CTTCAGTGTAACTGAGTCCAGTTCACACCTTCTGTCAAGAAAAATCGCCC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGTAACTGAGTCCAGTTCACACCTTCTGTCAAGAAAAATCGCCC  1119

seq1  TTCAGTGTAACTGAGTCCAGTTCACACCTTCTGTCAAGTTCCCGGTTATT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTAACTGAGTCCAGTTCACACCTTCTGTCAAGTTCCCGGTTATT  1169

seq1  TCTAAGGCTAAGAAGGAAAACCAGCTTGGAATTC  1233
      ||||||||||||||||||||||||||||||||||
seq2  TCTAAGGCTAAGAAGGAAAACCAGCTTGGAATTC  1203

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Alignment Information