BAC Information

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BAC

Clone NameB6Ng01-168G07
Chromosome10 (Build37)
Map Location 124,475,688 - 124,580,893
singlet/doubletdoublet
Overlap genenone
Upstream gene4930503E24Rik, LOC671416
Downstream geneSlc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994, Lrig3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168G07.bB6Ng01-168G07.g
ACCDH959643DH959644
length1,1741,084
definitionDH959643|Mus musculus domesticus DNA, BAC clone: B6Ng01-168G07, 5' end.DH959644|Mus musculus domesticus DNA, BAC clone: B6Ng01-168G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,475,688 - 124,476,857)(124,579,807 - 124,580,893)
sequence
gaattcaaggccagagtgagtaacctagtaagaccagctctcaaaattta
aaaacacagaatggctgcagatgcagcccagagacagaaactctgctgag
ctttgagcagggccctgtgctcaatccccactaccataaataaataaata
aataaataaataaataaataaataaataaataaagttagaaaaagtgatg
tcttatttgttcacccttgaatcccaagaatccagatatatctaatattt
attgagccctttgcccaaggcattacttgacatttcatagattgttccat
tcagtgttggcagcaagcttgttggacaggtatacatattttcctataaa
tggcacatgggttaatactaagccttttatagtacagtgtcagcaaatgt
caaatcaaaaaaatgcaaactgcattcattaacccagcacattaaaattt
acttcaatgccatgcacttagtaagtatttaaatatgtgttaaacaaaat
tgtctttgaaagtaattttctgttattggattaattttatggtttatgcc
atatgatacattttcctttaaaaattatttgaggaagcatttttccatta
aatagggcaaaacaaagcctgttaacaaataaaattcaaagtatttatat
gccatgtttctaaaatcaataggatttttctggattcaagactgacaaga
aaaaccgaagttatcagagaagtcttcctggggtggtacttagaaaagaa
tattcagaaatggtctccattttactgtctcttgagtcccctaacacccc
aagtggaattgtgaaacacatcataaatttcttttaatctcattctaagg
gagagtcttcaaatgaatgagtgtaaagtccactggccataaagtaagat
gaagcagagtgaaattgaaggttggaattcgctgtctctagtaggaataa
aattgcccagttctaaatagatagccacccagctgatctgccttgattca
gcctggttcgacagtgcagcactatttatatttttgaattgagattggaa
aatgtccacagccacatacaccatcccttcttcttacttcctgggatcca
cctcattttgtggcagcatccacctaatattttttagcatcaccatatct
ggagacaagaagggtggaaatatt
gaattcaagcaggtcaggaagcaggagctgatgcagaggccatggaggga
tgttctttactggcttgcttcctctggcttgctcagcctgctctcttata
gaacccaagactaccagcccagagatggtcccacccacaaggggcctttc
ccccttgatcactaattgaaaaaatgccttacagttggatctcatggagg
catttccccaactgaagctcctttctctgtgataactctggcttgtgtca
agttgacacaaaactagccagtacagtcaccctcctattaatatttgaag
ctcactggttctggttccatttcactcctttctttgacacatcagatatg
attctgcagaagtgtgcaagcctgctccctcctctagatgttcacagaaa
ccactgaagaccacaacttcactctgttttccaatgctgcccttctacca
tcttgtctaaacctctcaaaattccctgaagccttgagcactctgttaca
gtcctgacctgcagctctgcaggtctagggatgtttctcctttccacacg
tttttagctagactatctcccatcagctgacaccctttgtgcaatgcacc
aggcaatatgccccgttgacttttagatcacagtatgctctatattagtg
gcctatttttaagttccagtactcccagtttctgaatgctgtctgttgag
ggcttagtgatgcaaattttgattaaaaatttcatacaccatgagaataa
aaaacttggtgtggtggttcatacctttatttatagctcatgggaggcag
aggtaggagggtctctgagtttgaggccagcctggtctacagggtgagtt
ccaggacttccaacttccaaagctacacagtgaaacctggtctcactaac
aagctagctagctagctaactaactaactaactaactaactaactataaa
tatgagaaaaaatgtgtaaattactgagaatggccaggtcatccatgcac
tggtttcctcttaaatctctctctgagtagttggtggtcctcattttgta
aatgttattcagttgtgtaggtcttagaacaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_124475688_124476857
seq2: B6Ng01-168G07.b_45_1218

seq1  GAATTCAAGGCCAGAGTGAGTAACCTAGTAAGACCAGCTCTCAAAATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGAGTGAGTAACCTAGTAAGACCAGCTCTCAAAATTTA  50

seq1  AAAACACAGAATGGCTGCAGATGCAGCCCAGAGACAGAAACTCTGCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAGAATGGCTGCAGATGCAGCCCAGAGACAGAAACTCTGCTGAG  100

seq1  CTTTGAGCAGGGCCCTGTGCTCAATCCCCACTACCATAAATAAATAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGCAGGGCCCTGTGCTCAATCCCCACTACCATAAATAAATAAATA  150

seq1  AATAAATAAATAAATAAATAAATAAATAAATAAAGTTAGAAAAAGTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAATAAATAAATAAATAAAGTTAGAAAAAGTGATG  200

seq1  TCTTATTTGTTCACCCTTGAATCCCAAGAATCCAGATATATCTAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTGTTCACCCTTGAATCCCAAGAATCCAGATATATCTAATATTT  250

seq1  ATTGAGCCCTTTGCCCAAGGCATTACTTGACATTTCATAGATTGTTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCCCTTTGCCCAAGGCATTACTTGACATTTCATAGATTGTTCCAT  300

seq1  TCAGTGTTGGCAGCAAGCTTGTTGGACAGGTATACATATTTTCCTATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTGGCAGCAAGCTTGTTGGACAGGTATACATATTTTCCTATAAA  350

seq1  TGGCACATGGGTTAATACTAAGCCTTTTATAGTACAGTGTCAGCAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATGGGTTAATACTAAGCCTTTTATAGTACAGTGTCAGCAAATGT  400

seq1  CAAATCAAAAAAATGCAAACTGCATTCATTAACCCAGCACATTAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAAAAAATGCAAACTGCATTCATTAACCCAGCACATTAAAATTT  450

seq1  ACTTCAATGCCATGCACTTAGTAAGTATTTAAATATGTGTTAAACAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATGCCATGCACTTAGTAAGTATTTAAATATGTGTTAAACAAAAT  500

seq1  TGTCTTTGAAAGTAATTTTCTGTTATTGGATTAATTTTATGGTTTATGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGAAAGTAATTTTCTGTTATTGGATTAATTTTATGGTTTATGCC  550

seq1  ATATGATACATTTTCCTTTAAAAATTATTTGAGGAAGCATTTTTCCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATACATTTTCCTTTAAAAATTATTTGAGGAAGCATTTTTCCATTA  600

seq1  AATAGGGCAAAACAAAGCCTGTTAACAAATAAAATTCAAAGTATTTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGCAAAACAAAGCCTGTTAACAAATAAAATTCAAAGTATTTATAT  650

seq1  GCCATGTTTCTAAAATCAATAGGATTTTTCTGGATTCAAGACTGACAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTTTCTAAAATCAATAGGATTTTTCTGGATTCAAGACTGACAAGA  700

seq1  AAAACCGAAGTTATCAGAGAAGTCTTCCTGGGGTGGTACTTAGAAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCGAAGTTATCAGAGAAGTCTTCCTGGGGTGGTACTTAGAAAAGAA  750

seq1  TATTCAGAAATGGTCTCCATTTTACTGTCTCTTGAGTCCCCTAACACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAAATGGTCTCCATTTTACTGTCTCTTGAGTCCCCTAACACCCC  800

seq1  AAGTGGAATTGTGAAACACATCATAAATTTCTTTTAATCTCATTCTAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAATTGTGAAACACATCATAAATTTCTTTTAATCTCATTCTAAGG  850

seq1  GAGAGTCTTCAAATGAATGAGTGTAAAGTCCACTGGCCATAAAGTAAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCTTCAAATGAATGAGTGTAAAGTCCACTGGCCATAAAGTAAGAT  900

seq1  GAAGCAGAGTGAAATTGAAGGTTTGGAATTCGCTGTCTCTAGTAGGAATA  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAAGCAGAGTGAAATTGAAGG-TTGGAATTCGCTGTCTCTAGTAGGAATA  949

seq1  AAATTG-CCAGTTCTAAATAAGATAGCCACCCAGCTGATCTGCCTTGATT  999
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  AAATTGCCCAGTTCTAAAT-AGATAGCCACCCAGCTGATCTGCCTTGATT  998

seq1  CAGCCTGGTTCGACAGTGCAAGCACTATTTAATATTTTGAATTGAGATTG  1049
      ||||||||||||||||||| |||||||||||   ||||||||||||||||
seq2  CAGCCTGGTTCGACAGTGC-AGCACTATTTATATTTTTGAATTGAGATTG  1047

seq1  GAAAATGTCCACAGGCACATACA-CATCCCTTC-TCTTACTCCCTGGGAT  1097
      |||||||||||||| |||||||| ||||||||| ||||||| ||||||||
seq2  GAAAATGTCCACAGCCACATACACCATCCCTTCTTCTTACTTCCTGGGAT  1097

seq1  -CAACTCATTTTGTTGCAGCATCCAC--TATATTTTTTAGCATCACCATA  1144
       || |||||||||| |||||||||||   |||||||||||||||||||| 
seq2  CCACCTCATTTTGTGGCAGCATCCACCTAATATTTTTTAGCATCACCAT-  1146

seq1  ATCTGGAGACAAAGAGGGTG--AATATT  1170
      ||||||||||||  ||||||  ||||||
seq2  ATCTGGAGACAAGAAGGGTGGAAATATT  1174

seq1: chr10_124579807_124580893
seq2: B6Ng01-168G07.g_65_1148 (reverse)

seq1  GGTTG-TCTTAGACCTACACAACTGAATAACATTCTACAAAATGAGGACC  49
      ||||| ||| |||||||||||||||||||||||| |||||||||||||||
seq2  GGTTGTTCTAAGACCTACACAACTGAATAACATT-TACAAAATGAGGACC  49

seq1  ACCAACTACCTCAAGAGAGAGATTTAAGAGGAAACCAGTGCATGGATGAC  99
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  ACCAACTA-CTC-AGAGAGAGATTTAAGAGGAAACCAGTGCATGGATGAC  97

seq1  CTGGCCATTCTCAGTAATTTACACATTTTTTTCTCATATTTATAGTTAGT  149
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGGCCATTCTCAGTAATTTACACA-TTTTTTCTCATATTTATAGTTAGT  146

seq1  TAGTTAGTTAGTTAGTTAGTTAGCTAGCTAGCTAGCTTGTTAGTGAGACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGTTAGTTAGTTAGTTAGCTAGCTAGCTAGCTTGTTAGTGAGACC  196

seq1  AGGTTTCACTGTGTAGCCTTGGAAGTTGGAAGTCCTGGAACTCACCCTGT  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGTTTCACTGTGTAGCTTTGGAAGTTGGAAGTCCTGGAACTCACCCTGT  246

seq1  AGACCAGGCTGGCCTCAAACTCAGAGACCCTCCTACCTCTGCCTCCCATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCCTCAAACTCAGAGACCCTCCTACCTCTGCCTCCCATG  296

seq1  AGCTATAAATAAAGGTATGAACCACCACACCAAGTTTTTTATTCTCATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAAATAAAGGTATGAACCACCACACCAAGTTTTTTATTCTCATGG  346

seq1  TGTATGAAATTTTTAATCAAAATTTGCATCACTAAGCCCTCAACAGACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAAATTTTTAATCAAAATTTGCATCACTAAGCCCTCAACAGACAG  396

seq1  CATTCAGAAACTGGGAGTACTGGAACTTAAAAATAGGCCACTAATATAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGAAACTGGGAGTACTGGAACTTAAAAATAGGCCACTAATATAGA  446

seq1  GCATACTGTGATCTAAAAGTCAACGGGGCATATTGCCTGGTGCATTGCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTGTGATCTAAAAGTCAACGGGGCATATTGCCTGGTGCATTGCAC  496

seq1  AAAGGGTGTCAGCTGATGGGAGATAGTCTAGCTAAAAACGTGTGGAAAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTGTCAGCTGATGGGAGATAGTCTAGCTAAAAACGTGTGGAAAGG  546

seq1  AGAAACATCCCTAGACCTGCAGAGCTGCAGGTCAGGACTGTAACAGAGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATCCCTAGACCTGCAGAGCTGCAGGTCAGGACTGTAACAGAGTG  596

seq1  CTCAAGGCTTCAGGGAATTTTGAGAGGTTTAGACAAGATGGTAGAAGGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCTTCAGGGAATTTTGAGAGGTTTAGACAAGATGGTAGAAGGGC  646

seq1  AGCATTGGAAAACAGAGTGAAGTTGTGGTCTTCAGTGGTTTCTGTGAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGAAAACAGAGTGAAGTTGTGGTCTTCAGTGGTTTCTGTGAACA  696

seq1  TCTAGAGGAGGGAGCAGGCTTGCACACTTCTGCAGAATCATATCTGATGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGGAGGGAGCAGGCTTGCACACTTCTGCAGAATCATATCTGATGT  746

seq1  GTCAAAGAAAGGAGTGAAATGGAACCAGAACCAGTGAGCTTCAAATATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAAAGGAGTGAAATGGAACCAGAACCAGTGAGCTTCAAATATTA  796

seq1  ATAGGAGGGTGACTGTACTGGCTAGTTTTGTGTCAACTTGACACAAGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGGTGACTGTACTGGCTAGTTTTGTGTCAACTTGACACAAGCCA  846

seq1  GAGTTATCACAGAGAAAGGAGCTTCAGTTGGGGAAATGCCTCCATGAGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATCACAGAGAAAGGAGCTTCAGTTGGGGAAATGCCTCCATGAGAT  896

seq1  CCAACTGTAAGGCATTTTTTCAATTAGTGATCAAGGGGGAAAGGCCCCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGTAAGGCATTTTTTCAATTAGTGATCAAGGGGGAAAGGCCCCTT  946

seq1  GTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCA  996

seq1  GGCTGAGCAAGCCAGAGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGCAAGCCAGAGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGC  1046

seq1  CTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAATTC  1084