BAC Information

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BAC

Clone NameB6Ng01-168K06
Chromosome10 (Build37)
Map Location 119,452,075 - 119,646,470
singlet/doubletdoublet
Overlap geneGrip1, Helb, Irak3, Tmbim4
Upstream geneLOC100042861, LOC674417, Cand1
Downstream gene1190005P17Rik, Hmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168K06.bB6Ng01-168K06.g
ACCDH959827DH959828
length1,1221,173
definitionDH959827|Mus musculus domesticus DNA, BAC clone: B6Ng01-168K06, 5' end.DH959828|Mus musculus domesticus DNA, BAC clone: B6Ng01-168K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,645,334 - 119,646,470)(119,452,075 - 119,453,257)
sequence
gaattccgcttcgttacgcgtcaacgaacagcctaaactcaaagtaataa
ctttgagtcgccgtgactttatgcgtcggtctgggaaacttctcagtcat
cacacacacgtatgccgagttctgtaccccacggggagacagtaatgact
aggatggtaaggtctcagcacggggaacaaataaatgagggcatcagccc
gtgatttccaatgcttgatatggatcctcctggtgtgctgaccccaaaca
tgcaattatatctgtccctactccagaactgtaattttgctactgtcacg
aatcgtaatgtaaatatctgatgtgcagatggccttaggcgaccccctgt
gaaagggtcccgcttgcgaccctcaggttgaggaccgctgacctaggcga
cccggcccacacctctagaagacaactatgtctccctctggtcacttggt
ccccctgacccccgccacatacccatgcggatgtgcacgctggccgacgc
cacgcagctgccgtagttgaagtcatcctcgatggacgagcggggatagc
ccgggtccgtgtcggccatgtcgccagcagtgcccgcccgcacctgcccc
ggccgaagtgggagcctacactgaccacaaccgccttcacccacttccgg
gatggccgccagacagaactagccgaactgcctctctgcagcgagcgccg
aaccagtcgatcgctcccatggaaaagtctccactaggagaggaggttgc
tttctagtaggagacagattgctctctcccacgtcatcgcaagggagttt
tttctaggattttctttaataggttcctctaggcctctagagaatctctt
ccagaaagagtgctaaacaagatagaaagatttacgggtatcaatcaaca
cctctcattaattcacttcaatactttggtccaggaatgcacttttaagt
aaaattattttaaagcaacatttagccttcatttattgacatttctttta
aaacagacccccccctgctttaagtaaatatccctcatcttgaaagacag
tagatccacccccacccatccacccccaccccatagggcgtatcaggttt
cacggatctatgttgtgaatcg
gaattcagcagaaaaggaaagaaactggatgctctgatttgttcatagac
actattgacacaggcatgctaaagcgaacagcaaatactgatcttgcaaa
gatatgtaataaactatgttgaaagaatgaggaatgaagaggcaagaaag
agagatgggtgtggtgataacctagcaagggagagaacaaacccccgtgg
ttcataacacagtgtaaacagagactgactaagattaaaaactaaaacag
tagcattacatgctatttcacaagtgcaatcaaccaaaggtgaaagtgtg
tgacatgctatttcacaagtgcaatcaaccaaaggtgaaagtgtgtgttc
ctcaaacggatgccgagctatgtccccagtaaactggtggtgggtggaaa
ctactcatacaacctaacaatacagtacactgtagtatgcagtgttgatc
tgcatggccaatgggaagctgtggcttgccatctttgcacagtatcacaa
gaggctgccatgccgcatgttgccggtttcacataatcaaaactcaagta
gggcttctactgaaagaaactgccttcacactatcaaatctcgaaatcgc
aaatgaatcaccttacaggcaggaatcatctctatttgaatctggggaga
caggaaattgaagactttacttctgcacaattttccaccaaattacatga
attcgaaattttgatacaaagtgaaaaggaagagctgtcaagatggctca
gttgttaagtgcttgcctttctagctcgagagtccaagcttcatacttaa
agccatgtacaaatgcagggcatggcatcatgcacctataatcccagcac
tcgagagcgggagacaggaagaccccctgggagtttgttaggtagccagt
ctattaaattggttagtgctggagaggggagctgaagtcagtgtggttga
atagtaatacaataagctcttctgcagatcttctgcagacagggtgccgt
gtgcaggatctacactttgtgatgatcacattaatgctctcttacagaaa
ctcagtaaagattgtgactcttcatcacgtgttgtatagatgaagcaccc
aggatttcgttcctagcactactcaaaagtgtagagccaggcttctggtt
cacctgtttatcaccacaaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119645334_119646470
seq2: B6Ng01-168K06.b_45_1166 (reverse)

seq1  CAATTCACAAACATCGAATCCGTGAAAACCTGAATTACGCCC-ATGGGGT  49
      | |||||| ||||| | ||||||| ||||||||  ||||||| |||||||
seq2  CGATTCAC-AACATAG-ATCCGTG-AAACCTGA--TACGCCCTATGGGGT  45

seq1  GGGGGTGGGATGGGGGTGGGGGTGGATTCCTACTTGTCTTTCAAGATGAA  99
      |||||| ||||  ||||||||||||||  |||| ||||||||||||||| 
seq2  GGGGGT-GGAT--GGGTGGGGGTGGAT--CTAC-TGTCTTTCAAGATGAG  89

seq1  GGATTATTTAACTTTAAAAGCAGGGGGGGGGGTCTGTTTTAAAAGAAATG  149
      ||| ||||| ||||  ||||||  ||||||||||||||||||||||||| 
seq2  GGA-TATTT-ACTT--AAAGCA--GGGGGGGGTCTGTTTTAAAAGAAAT-  132

seq1  GTCAATAAATGAAGGCCTAAATGTTGCTTTAAAATAATTTTACTTAAAAG  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTCAATAAATGAAGG-CTAAATGTTGCTTTAAAATAATTTTACTTAAAAG  181

seq1  TGCATTCCTGGACC-AAGTATTGAAGTGAATTAATGAGAGGTTGTTGATT  248
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  TGCATTCCTGGACCAAAGTATTGAAGTGAATTAATGAGAGG-TGTTGATT  230

seq1  GATA-CCGT-AATCTTTCTATCTTGTTTAGCACTCTTTCTGGAAGAGATT  296
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCGTAAATCTTTCTATCTTGTTTAGCACTCTTTCTGGAAGAGATT  280

seq1  CTCTAGAGGCCTAGAGGAA-CTTTTAAAGAAAATCCTAGAAAAAACTCCC  345
      ||||||||||||||||||| || |||||||||||||||||||||||||||
seq2  CTCTAGAGGCCTAGAGGAACCTATTAAAGAAAATCCTAGAAAAAACTCCC  330

seq1  TTGCGATGACGTGGGAGAGAGCAATCTGTCTCCTACTAGAAAGCAACCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGATGACGTGGGAGAGAGCAATCTGTCTCCTACTAGAAAGCAACCTC  380

seq1  CTCTCCTAGTGGAGACTTTTCCATGGGAGCGATCGACTGGTTCGGCGCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTAGTGGAGACTTTTCCATGGGAGCGATCGACTGGTTCGGCGCTC  430

seq1  GCTGCAGAGAGGCAGTTCGGCTAGTTCTGTCTGGCGGCCATCCCGGAAGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGAGAGGCAGTTCGGCTAGTTCTGTCTGGCGGCCATCCCGGAAGT  480

seq1  GGGTGAAGGCGGTTGTGGTCAGTGTAGGCTCCCACTTCGGCCGGGGCAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAGGCGGTTGTGGTCAGTGTAGGCTCCCACTTCGGCCGGGGCAGG  530

seq1  TGCGGGCGGGCACTGCTGGCGACATGGCCGACACGGACCCGGGCTATCCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGCGGGCACTGCTGGCGACATGGCCGACACGGACCCGGGCTATCCC  580

seq1  CGCTCGTCCATCGAGGATGACTTCAACTACGGCAGCTGCGTGGCGTCGGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCGTCCATCGAGGATGACTTCAACTACGGCAGCTGCGTGGCGTCGGC  630

seq1  CAGCGTGCACATCCGCATGGGTATGTGGCGGGGGTCAGGGGGACCAAGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGCACATCCGCATGGGTATGTGGCGGGGGTCAGGGGGACCAAGTG  680

seq1  ACCAGAGGGAGACATAGTTGTCTTCTAGAGGTGTGGGCCGGGTCGCCTAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGGGAGACATAGTTGTCTTCTAGAGGTGTGGGCCGGGTCGCCTAG  730

seq1  GTCAGCGGTCCTCAACCTGAGGGTCGCAAGCGGGACCCTTTCACAGGGGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCGGTCCTCAACCTGAGGGTCGCAAGCGGGACCCTTTCACAGGGGG  780

seq1  TCGCCTAAGGCCATCTGCACATCAGATATTTACATTACGATTCGTGACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTAAGGCCATCTGCACATCAGATATTTACATTACGATTCGTGACAG  830

seq1  TAGCAAAATTACAGTTCTGGAGTAGGGACAGATATAATTGCATGTTTGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAATTACAGTTCTGGAGTAGGGACAGATATAATTGCATGTTTGGG  880

seq1  GTCAGCACACCAGGAGGATCCATATCAAGCATTGGAAATCACGGGCTGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCACACCAGGAGGATCCATATCAAGCATTGGAAATCACGGGCTGAT  930

seq1  GCCCTCATTTATTTGTTCCCCGTGCTGAGACCTTACCATCCTAGTCATTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCATTTATTTGTTCCCCGTGCTGAGACCTTACCATCCTAGTCATTA  980

seq1  CTGTCTCCCCGTGGGGTACAGAACTCGGCATACGTGTGTGTGATGACTGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCCCGTGGGGTACAGAACTCGGCATACGTGTGTGTGATGACTGA  1030

seq1  GAAGTTTCCCAGACCGACGCATAAAGTCACGGCGACTCAAAGTTATTACT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTCCCAGACCGACGCATAAAGTCACGGCGACTCAAAGTTATTACT  1080

seq1  TTGAGTTTAGGCTGTTCGTTGACGCGTAACGAAGCGGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTAGGCTGTTCGTTGACGCGTAACGAAGCGGAATTC  1122

seq1: chr10_119452075_119453257
seq2: B6Ng01-168K06.g_69_1241

seq1  GAATTCAGCAGAAAAGGAAAGAAACTGGATGCTCTGATTTGTTCATAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAAAAGGAAAGAAACTGGATGCTCTGATTTGTTCATAGAC  50

seq1  ACTATTGACACAGGCATGCTAAAGCGAACAGCAAATACTGATCTTGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGACACAGGCATGCTAAAGCGAACAGCAAATACTGATCTTGCAAA  100

seq1  GATATGTAATAAACTATGTTGAAAGAATGAGGAATGAAGAGGCAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTAATAAACTATGTTGAAAGAATGAGGAATGAAGAGGCAAGAAAG  150

seq1  AGAGATGGGTGTGGTGATAACCTAGCAAGGGAGAGAACAAACCCCCGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGGTGTGGTGATAACCTAGCAAGGGAGAGAACAAACCCCCGTGG  200

seq1  TTCATAACACAGTGTAAACAGAGACTGACTAAGATTAAAAACTAAAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAACACAGTGTAAACAGAGACTGACTAAGATTAAAAACTAAAACAG  250

seq1  TAGCATTACATGCTATTTCACAAGTGCAATCAACCAAAGGTGAAAGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTACATGCTATTTCACAAGTGCAATCAACCAAAGGTGAAAGTGTG  300

seq1  TGACATGCTATTTCACAAGTGCAATCAACCAAAGGTGAAAGTGTGTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCTATTTCACAAGTGCAATCAACCAAAGGTGAAAGTGTGTGTTC  350

seq1  CTCAAACGGATGCCGAGCTATGTCCCCAGTAAACTGGTGGTGGGTGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACGGATGCCGAGCTATGTCCCCAGTAAACTGGTGGTGGGTGGAAA  400

seq1  CTACTCATACAACCTAACAATACAGTACACTGTAGTATGCAGTGTTGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCATACAACCTAACAATACAGTACACTGTAGTATGCAGTGTTGATC  450

seq1  TGCATGGCCAATGGGAAGCTGTGGCTTGCCATCTTTGCACAGTATCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGCCAATGGGAAGCTGTGGCTTGCCATCTTTGCACAGTATCACAA  500

seq1  GAGGCTGCCATGCCGCATGTTGCCGGTTTCACATAATCAAAACTCAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGCCATGCCGCATGTTGCCGGTTTCACATAATCAAAACTCAAGTA  550

seq1  GGGCTTCTACTGAAAGAAACTGCCTTCACACTATCAAATCTCGAAATCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCTACTGAAAGAAACTGCCTTCACACTATCAAATCTCGAAATCGC  600

seq1  AAATGAATCACCTTACAGGCAGGAATCATCTCTATTTGAATCTGGGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATCACCTTACAGGCAGGAATCATCTCTATTTGAATCTGGGGAGA  650

seq1  CAGGAAATTGAAGACTTTACTTCTGCACAATTTTCCACCAAATTACATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATTGAAGACTTTACTTCTGCACAATTTTCCACCAAATTACATGA  700

seq1  ATTCGAAATTTTGATAC-AAGTGAAAAGGAAGAGCTGTCAAGATGGCTCA  749
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTCGAAATTTTGATACAAAGTGAAAAGGAAGAGCTGTCAAGATGGCTCA  750

seq1  GTTGTTAAGTGCTTGCCTTTCTAGCTCGAGAGTCCAAGCTTCATACTTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTAAGTGCTTGCCTTTCTAGCTCGAGAGTCCAAGCTTCATACTTAA  800

seq1  AGCCATGTACAAATGCAGGGCATGGCATCATGCACCTATAATCCCAGCAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTACAAATGCAGGGCATGGCATCATGCACCTATAATCCCAGCAC  850

seq1  TCGAGAGCGGGAGACAGGAAGACCCCCT-GGAGTTTGTTAGGTAGCCAGT  898
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCGAGAGCGGGAGACAGGAAGACCCCCTGGGAGTTTGTTAGGTAGCCAGT  900

seq1  CTATTTAAATTGGTTAGTGCTGGAGAGGGGAGCTGAGGTCAGTGTGGTTG  948
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTA-TTAAATTGGTTAGTGCTGGAGAGGGGAGCTGAAGTCAGTGTGGTTG  949

seq1  AATAGTAATAACAATAAGCTCTTCTGCAGATCTTCTGCAGACAGGGTGCC  998
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAT-ACAATAAGCTCTTCTGCAGATCTTCTGCAGACAGGGTGCC  998

seq1  GGTGTGCAGGGATCTAACCACTTTGTGATGATCCACA-TAATGCTCTC-T  1046
       ||||||| |||||||  |||||||||||||| |||| |||||||||| |
seq2  -GTGTGCA-GGATCTA--CACTTTGTGATGAT-CACATTAATGCTCTCTT  1043

seq1  ACAGAAACTCAGGTAAAGATTGTGACTCTTCATCACGTGTTGCATAGATG  1096
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  ACAGAAACTCA-GTAAAGATTGTGACTCTTCATCACGTGTTGTATAGATG  1092

seq1  AGGCACCCAAGGATTCTGTCCCCAAGCAATCAACCCAGAAGTGTTAGAGC  1146
      | |||||| ||||||  ||  || ||||  | || || ||||| ||||||
seq2  AAGCACCC-AGGATTTCGT-TCCTAGCA--CTACTCAAAAGTG-TAGAGC  1137

seq1  CAGGGCTTCGGCTCCAACTG-TTATCACCATCAAATGT  1183
      || |||||| | | || ||| ||||||||| |||||||
seq2  CA-GGCTTCTGGTTCACCTGTTTATCACCA-CAAATGT  1173