BAC Information

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BAC

Clone NameB6Ng01-171O01
Chromosome10 (Build37)
Map Location 29,354,100 - 29,355,218
singlet/doubletsinglet
Overlap genenone
Upstream geneE430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389
Downstream geneRpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171O01.bB6Ng01-171O01.g
ACCGA000645GA000646
length1,1171,087
definitionB6Ng01-171O01.b B6Ng01-171O01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagaacaattcactgaaaaacatgggtgtcagggagtcactga
aaattacccaagaatttgctccaagtaagtagagggatattcactgacag
cagacattgaaatgattctaccttaaactggttttcacacacacacacac
acacacacacacacacacacacacagagagagagagagaaagagagagag
acagagagagagagaaagagagagagacagagacacagagagacacagag
agacacagagagacacagagacacagagacagagacaggacagaggaaga
gacatatatacatgcatgatttatatgcttttattttatgtttatggtag
catgtacctcagaggccagaagagaactctgaatcctgtgtaggtggagt
tacacagttttgcaaaccattatttgggttctgggaatcaaagcctctag
acgagcagtcatcagtcttaactgcttcttcagctcccatatgtactgat
ttcacatttgctctcatagtatggtactaagaccatgtgacagtgtggtc
ttattactatctatttgaactagatgttttcttaactatatctatgtgca
tgtgtgtatcctgtgtatgtggccctgcatgacactagacctgatcaccc
atattagtgcccaccctgggcacttaaacagcagtggtcagtagaagctg
gttgtcatcctgtcttttgatagtgtttgttccaagttatttttctattt
gaccatagcagtgttaacaactgtgtagtggtggcaaatttaaggcccac
atcttttatagctgaaatgctcatgaactcactcaatgaatatataggac
taagtgggaactttcacaaaactctcatgagtatttgcaaatgatgtaag
tagtaatacattttcagttcaaacatgtcttaaacatcctctggaatgga
ttgtcaaccagtactcagagggtttggctatccttttctctaagtaccac
agagggatattatggaatagtttgaggcagcaagaacattacttttaata
gtgaaaagattttttgctaagcaatggggtctatggaagagatgtataac
atgggtaaatagtgaac
gaattctcacctgcggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgagaatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaaggctgaagtgtggacactatacccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacactgacaccattgcatacactagcaagatttttatcgaa
aggacccagatgtagctgtctcttgtgagactaatgccggggccctagca
aacacagaagtggatgcccacagtcagctaatgggatggatccacaggct
tcccaattggaggagctaggagaaagtaccctaaggagcttaaagggaat
ctgcaaccctattagttgaatcacattattgaactaaccaggtacccaag
gaacctctttactcctaggctgtaatatgatattcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29354100_29355218
seq2: B6Ng01-171O01.b_32_1148

seq1  GAATTCCTAGAACAATTCACTGAAAAACATGGGTGTCAGGGAGTCACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGAACAATTCACTGAAAAACATGGGTGTCAGGGAGTCACTGA  50

seq1  AAATTACCCAAGAATTTGCTCCAAGTAAGTAGAGGGATATTCACTGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACCCAAGAATTTGCTCCAAGTAAGTAGAGGGATATTCACTGACAG  100

seq1  CAGACATTGAAATGATTCTACCTTAAACTGGTTTTCACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTGAAATGATTCTACCTTAAACTGGTTTTCACACACACACACAC  150

seq1  ACACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAG  200

seq1  ACAGAGAGAGAGAGAAAGAGAGAGAGACAGAGACACAGAGAGACACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGAGAGAAAGAGAGAGAGACAGAGACACAGAGAGACACAGAG  250

seq1  AGACACAGAGAGACACAGAGACACAGAGACAGAGACAGGACAGAGGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGAGAGACACAGAGACACAGAGACAGAGACAGGACAGAGGAAGA  300

seq1  GACATATATACATGCATGATTTATATGCTTTTATTTTATGTTTATGGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATATACATGCATGATTTATATGCTTTTATTTTATGTTTATGGTAG  350

seq1  CATGTACCTCAGAGGCCAGAAGAGAACTCTGAATCCTGTGTAGGTGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACCTCAGAGGCCAGAAGAGAACTCTGAATCCTGTGTAGGTGGAGT  400

seq1  TACACAGTTTTGCAAACCATTATTTGGGTTCTGGGAATCAAAGCCTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTTTTGCAAACCATTATTTGGGTTCTGGGAATCAAAGCCTCTAG  450

seq1  ACGAGCAGTCATCAGTCTTAACTGCTTCTTCAGCTCCCATATGTACTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGCAGTCATCAGTCTTAACTGCTTCTTCAGCTCCCATATGTACTGAT  500

seq1  TTCACATTTGCTCTCATAGTATGGTACTAAGACCATGTGACAGTGTGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTTGCTCTCATAGTATGGTACTAAGACCATGTGACAGTGTGGTC  550

seq1  TTATTACTATCTATTTGAACTAGATGTTTTCTTAACTATATCTATGTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTATCTATTTGAACTAGATGTTTTCTTAACTATATCTATGTGCA  600

seq1  TGTGTGTATCCTGTGTATGTGGCCCTGCATGACACTAGACCTGATCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATCCTGTGTATGTGGCCCTGCATGACACTAGACCTGATCACCC  650

seq1  ATATTAGTGCCCACCCTGGGCACTTAAACAGCAGTGGTCAGTAGAAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGTGCCCACCCTGGGCACTTAAACAGCAGTGGTCAGTAGAAGCTG  700

seq1  GTTGTCATCCTGTCTTTTGATAGTGTTTGTTCCAAGTTA-TTTTCTATTT  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTTGTCATCCTGTCTTTTGATAGTGTTTGTTCCAAGTTATTTTTCTATTT  750

seq1  GACCATAGCAGTGTTAACAACTGTGTAGTGGTGGCAAATTTAAGGCCCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATAGCAGTGTTAACAACTGTGTAGTGGTGGCAAATTTAAGGCCCAC  800

seq1  ATC-TTTATAGCTGAAATGCTCATGAACTCACTCAATGAATATATAGGAC  848
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTATAGCTGAAATGCTCATGAACTCACTCAATGAATATATAGGAC  850

seq1  TAAGTGGGAACTTTCACAAAACTCTCATGAGTATTTGCAAAATGATGTAA  898
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAAGTGGGAACTTTCACAAAACTCTCATGAGTATTTGC-AAATGATGTAA  899

seq1  GTAGTAATACATTTTTCAGTTCAAACATGTCTTAAACATCCTCTGGAATG  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAATACA-TTTTCAGTTCAAACATGTCTTAAACATCCTCTGGAATG  948

seq1  GATTGTTCAACCAGTACTCAGAGGGTTTGGCTATCC-TTTCTCTAAGTAC  997
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  GATTG-TCAACCAGTACTCAGAGGGTTTGGCTATCCTTTTCTCTAAGTAC  997

seq1  CAACAGAGGGATATTA-GGAATAGTTTGAGGCAGCA--GACATTACTTTT  1044
      | |||||||||||||| |||||||||||||||||||   ||||||| |||
seq2  C-ACAGAGGGATATTATGGAATAGTTTGAGGCAGCAAGAACATTAC-TTT  1045

seq1  TAATAGTTGATAGATTTTTTTGCTAGGTAATGTGGTCTAT-GATGAGATG  1093
      |||||||  | ||| |||||||||| | |||| ||||||| || ||||||
seq2  TAATAGTGAAAAGA-TTTTTTGCTAAGCAATGGGGTCTATGGAAGAGATG  1094

seq1  TTTATTAACATGTGGTAAATA-TGAAC  1119
      |    ||||||| |||||||| |||||
seq2  T---ATAACATG-GGTAAATAGTGAAC  1117