BAC Information

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BAC

Clone NameB6Ng01-172E15
Chromosome10 (Build37)
Map Location 88,342,648 - 88,343,079
singlet/doubletsinglet
Overlap genenone
Upstream geneIgf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab, Sycp3, Chpt1, 8030451F13Rik, LOC667046, LOC627414, LOC100042998, EG435236, Spic, EG237433, Arl1, Utp20
Downstream geneSlc5a8, Tmem16d, Gas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, Anks1b, LOC100043039
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172E15.bB6Ng01-172E15.g
ACCGA000946GA000947
length4761,254
definitionB6Ng01-172E15.b B6Ng01-172E15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
catcaaaacactaaactggaagccatgatatatacacagaggacctggtg
caggccctgtgcctgctgcgtcagtttctgtgaatttgtatgagctttgc
tcatgttgattgaaagggcattgtttacttgatgtcctctattccctttg
gattttacactctcctcttctacagggaccccctgagttggggaggattt
gatggagatattccatttaaggctgagttttccaaggtttctcactctgt
ataatgcttggccaatattggtctctgtattattcccatctgctacaaga
ggaaacttctcagatggtaactgaacaaggcaccattttattatgagttc
agcagaatatttttaggagtcattttattattgtttcttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttctcctcctcctcctcctcctc
gaattccccactcccaaccccatctgacctctaaactccttggggcctcc
agtctcttgagggttaagtgcatcatctatgaatgagcacagacccagca
gtcctctgctgtatgtgtgttagtgttctcatattagctagtgtatgctg
ccattctgatgatgattcttgcatctgtaacttctgatatctttcctagg
ttttccatcactagggttgcctccctttgtgatttctttatggtttctat
ttctgtttttagaccctgggcatttttgttcaattcctttacctgtttga
tggtgtttcctgtatttctttaaaagatttatgtgtttcctctttaaggg
cttctacctatttatctgtgttcttctgtaattctttaagggggttattt
atgtcttaagttcctctatcatcttcatgagatgggattttatgagatat
tgcttttcaggtgtgttagggtatccagggcttgctgtgttcagagaact
gggttctggtgttgccaaatagcattggtttctgttgcttatgttcttgt
gctttcctctccccatctgattatctctggtgttaactgcccttgctctc
tctgactggagcctgtccctcctgtggcctggttatgaaggactttctgg
gagtcaagctgtctctaggtgtgggagggtgtctggagaaccagatttgc
cccatgtttagctttctttatcccatcattcctcacagatattacacaaa
agatgcttctttattctgtaatactttttaaaactctctagaaatagcct
tgcacgtcaacaatttgcaaaacataattgacacagacctttaagaaact
gaatttactcctccaacagtcatgccacttattaacaaagacacactctg
aaaaattgtcattgatctactgggattggtatgggaacatgctggaatat
atagtcacaattcattatatggtaacctactagacttataggctattgag
tagactaatgaggactatcattgactatatgtaacaaggatacttattaa
tgagctttggactatctgttgagacctggtctagcctacatattccatac
agcgccttgaacaaggcaagcatagttctcaggaacaaataaatctgaac
ctttctagaatcttaatggaaccaatcacttggatggtaatcgaatttat
aatagagtgagaatctacgatctggggtgtgtctcgggaacactattaga
ccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_88342648_88343079
seq2: B6Ng01-172E15.b_425_517 (reverse)

seq1  GAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  50

seq1  GAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGG--AGGAGGAG  98
      |||||||||||||||||||||||||| || || || || |  |       
seq2  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAA-------  93

seq1  GAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGAA  148
                                                        
seq2  --------------------------------------------------  93

seq1  GGAGAAGGAGAAGAAGGAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGA  198
                                                        
seq2  --------------------------------------------------  93

seq1  AGAGGAGGAGGAGAAGGAGAAGGAGAAGAAGGAGAAGAGGAGGAGGAGGA  248
                                                        
seq2  --------------------------------------------------  93

seq1  GGAGGAGGAGAAGGAGGAGGAGGAAGAAGAATAAGAATAAGAATAAGAAG  298
                                                        
seq2  --------------------------------------------------  93

seq1  AAGAAGAAGAAGAAGAAGAAGGAAGAAGAAGGAAGAAGAAGGAAGAAGAA  348
                                                        
seq2  --------------------------------------------------  93

seq1  GGAAGAAGAAGGAGGAGAAAGAGGAGAAGGAAGAAGAAGGAAGAAGAAGG  398
                                                        
seq2  --------------------------------------------------  93

seq1  AAGAAGAAGAAGAAGGAAGAAGAAGAAGAAGAAA  432
                                        
seq2  ----------------------------------  93