BAC Information

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BAC

Clone NameB6Ng01-175F22
Chromosome10 (Build37)
Map Location 104,175,036 - 104,175,895
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175F22.bB6Ng01-175F22.g
ACCGA003193GA003194
length8601,180
definitionB6Ng01-175F22.b B6Ng01-175F22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatttaaatgtcaaatgttaacaacagcaagctgtagatcag
ggcaacagcaagctgtagatcagggaaataaatgaccttaattctctttt
gtaaaatcgcattgccctgataattataggatctaatttcctacttctta
acctgctgtacatatttgaacattttgcagctgttcatttccatttatat
ttctttataatcttgctatgcgacttctgagttatctgaggcagtggcca
gacagatggttaacttctccagaaggtccatatataaagaactatgaact
gtcattgggcattagagaatataaaggaatttactagacattttctgagg
ctttaatgagagcaatacctgggttacttgcaattctgtaagaaaatcta
ccttgatcacctgacaatagaaaacagtgttaagaaatagcctttttctg
tggtaggacttataaaccgtgaaaacctctgttttgttggacattatata
ggcaaaggaatgtccaagatgaggctaagtccttttaagtaatatttttg
attgacatacattcattgcttatagaataggatcccagggggacattttc
ttatatgtaaggcactttgagtataactgtccacccatgcccttctcctg
tgtaggtttgtttattcttctactgtagagttttatttctattttcctgt
tatataaacacctgtaatttcatgtctatttaatagttatgattcacaaa
tgtataaaaataatgcaatggttgtctctctaacactaagaattccagta
taagggaaatgccagggccaggaagtggaagtgggtgagttggtgaacat
tgggaagggg

gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacatccgaattaa
caaaatcaaaaatgaaaagggagacataacaacagatcctgaagaaatcc
aaaacaccatcagatccttctacaaaaggctatactgaacaaaactggaa
aaccttgacgaaatggacaaatttctggacagatactaggtaccaaagtt
gaatcaggatcaagttgaccatctaaacagttccatatcacctaaagaaa
tagaagtagttattaataatctcccagccaaaaaaagcccaagaccagac
gggtttagtgcagagttctatcagaccttcaaagaagatctaattcccgt
tctgcacaaactatttcacaaaatagaagtagaaggtactctacccaact
cattttatgaagccactattactctgatacctaaaccacagaaagaccca
acaaagatagagaacttcagaccaatttctcttatgaatatcgatgcaaa
aatcctcaataaaattctcgctaaccgaatccaagaacatattaaagcaa
tcatccatcctgaccaagtaggttttattccagggatgcagggatggttt
aatatacgaaaatccatcaatgtaatccattatataaacaaactcaaaga
caaaaaccacatgatcatctcgttagatgcagaaaaagcatttgacaaga
tccaaaacccattcatgataaaagttttggaaagatcaggaattcaaggc
ccatacctaaacatgataaaagcaatctacagcaaaccagtagccaacat
caaagtaaatggagagaagctgggaagcaatcccactagacatgctaaat
caggactagacaaaggctgccccactttctccctaccttttcaacatagt
acttgaagtattagcccagagcaattcgacatcaaaagagatccagggga
tacaaattggaaaagaggaagtcaaaatatcacttttgcagatgaatatg
ataagtaatatataagttgacctaggattctaccgaagaaacttctaggc
tgataacaggctcggtgaagtagctgattaaattagctccaacagtcatg
gcttttctctcctatccaagattaaaccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104175036_104175895
seq2: B6Ng01-175F22.b_44_903

seq1  GAATTCAATATTTAAATGTCAAATGTTAACAACAGCAAGCTGTAGATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATTTAAATGTCAAATGTTAACAACAGCAAGCTGTAGATCAG  50

seq1  GGCAACAGCAAGCTGTAGATCAGGGAAATAAATGACCTTAATTCTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAGCAAGCTGTAGATCAGGGAAATAAATGACCTTAATTCTCTTTT  100

seq1  GTAAAATCGCATTGCCCTGATAATTATAGGATCTAATTTCCTACTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATCGCATTGCCCTGATAATTATAGGATCTAATTTCCTACTTCTTA  150

seq1  ACCTGCTGTACATATTTGAACATTTTGCAGCTGTTCATTTCCATTTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTGTACATATTTGAACATTTTGCAGCTGTTCATTTCCATTTATAT  200

seq1  TTCTTTATAATCTTGCTATGCGACTTCTGAGTTATCTGAGGCAGTGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATAATCTTGCTATGCGACTTCTGAGTTATCTGAGGCAGTGGCCA  250

seq1  GACAGATGGTTAACTTCTCCAGAAGGTCCATATATAAAGAACTATGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGGTTAACTTCTCCAGAAGGTCCATATATAAAGAACTATGAACT  300

seq1  GTCATTGGGCATTAGAGAATATAAAGGAATTTACTAGACATTTTCTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGGGCATTAGAGAATATAAAGGAATTTACTAGACATTTTCTGAGG  350

seq1  CTTTAATGAGAGCAATACCTGGGTTACTTGCAATTCTGTAAGAAAATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGAGAGCAATACCTGGGTTACTTGCAATTCTGTAAGAAAATCTA  400

seq1  CCTTGATCACCTGACAATAGAAAACAGTGTTAAGAAATAGCCTTTTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATCACCTGACAATAGAAAACAGTGTTAAGAAATAGCCTTTTTCTG  450

seq1  TGGTAGGACTTATAAACCGTGAAAACCTCTGTTTTGTTGGACATTATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGACTTATAAACCGTGAAAACCTCTGTTTTGTTGGACATTATATA  500

seq1  GGCAAAGGAATGTCCAAGATGAGGCTAAGTCCTTTTAAGTAATATTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGAATGTCCAAGATGAGGCTAAGTCCTTTTAAGTAATATTTTTG  550

seq1  ATTGACATACATTCATTGCTTATAGAATAGGATCCCAGGGGGACATTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACATACATTCATTGCTTATAGAATAGGATCCCAGGGGGACATTTTC  600

seq1  TTATATGTAAGGCACTTTGAGTATAACTGTCCACCCATGCCCTTCTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTAAGGCACTTTGAGTATAACTGTCCACCCATGCCCTTCTCCTG  650

seq1  TGTAGGTTTGTTTATTCTTCTACTGTAGAGTTTTATTTCTATTTTCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTTTGTTTATTCTTCTACTGTAGAGTTTTATTTCTATTTTCCTGT  700

seq1  TATATAAACACCTGTAATTTCATGTCTATTTAATAGTTATGATTCACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAACACCTGTAATTTCATGTCTATTTAATAGTTATGATTCACAAA  750

seq1  TGTATAAAAATAATGCAATGGTTGTCTCTCTAACACTAAGAATTCCAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAAAATAATGCAATGGTTGTCTCTCTAACACTAAGAATTCCAGTA  800

seq1  TAAGGGAAATGCCAGGGCCAGGAAGTGGAAGTGGGTGAGTTGGTGAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAAATGCCAGGGCCAGGAAGTGGAAGTGGGTGAGTTGGTGAACAT  850

seq1  TGGGAGGGGG  860
      ||||| ||||
seq2  TGGGAAGGGG  860


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