BAC Information

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BAC

Clone NameB6Ng01-178N03
Chromosome10 (Build37)
Map Location 29,916,682 - 29,917,762
singlet/doubletsinglet
Overlap gene2610036L11Rik
Upstream gene6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542
Downstream geneLOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178N03.bB6Ng01-178N03.g
ACCGA005702GA005703
length1,077106
definitionB6Ng01-178N03.b B6Ng01-178N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccaaaattaacatctttaaaatgtacccagattttactgtat
gttgctttcttagaagttaaattcacagcataattctggctaaattcaaa
gacataagctttagtcaaaggagtacacatctcttcaagctattcaatac
agcatgatttcatttttgacacactaaggaacaacacagtaacacaaaag
aaactcagaagccattaatgaataaagcataattcctcaatgttttaata
aaccacaatataaactgatacataaaagtgttttaaattaacatatcata
taatgcttaagcacatgctgacacctaacctctgctcttcttcagaatta
cctgtaagggaggaaatgaagatatatattatagctatgaaaaacaagtc
agaatcactgatctgcaaggtaaatgttctacatttctctagcacagtct
acctctctcaataaatggaaacatctctagattacccaaactggttttat
actcactttcattcacaaactttgccaattataatccgaagtatcaaact
ggttgatttcaaaacaggttttgggtatcatgtcatgtcatccccccgtc
cccccccaacaaattaatgatctaaagtattaaaaaaaaacagttctcaa
actcaaaacaactataaagtagtatcaaacagtataaatccatcacaata
taaaacatctcacaattaaacttgaattttaacagctggtcatcttacat
tgaataacttgcttcatatacaattttcaaaacataaaatgttacggaaa
taaaacaaagagaaatattaaattgtaaaaattctggaaggatgaggccc
taagttagcttcaaaactatacaaataaaaataaaaatgtaaaagaaact
ggctattacagtttaaaaagaaaaatagacctcagtttccgtgggttggg
tctgctaagctgatgacctgtgtctcatcccacattgtggagagaccaac
tgccaaagttgccctgacctctacaggtatgctgacagtgccccaaacac
acaaacacacgccacacatgcatgcag

catgttgttgttgttgtttttaaattttttttttcattatgacttggtgt
ttttttgtttctgaaagggaaaacctaaagttgggtgggtagatggttgg
aggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29916682_29917762
seq2: B6Ng01-178N03.b_46_1122

seq1  GAATTCATCCAAAATTAACATCTTTAAAATGTACCCAGATTTTACTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCAAAATTAACATCTTTAAAATGTACCCAGATTTTACTGTAT  50

seq1  GTTGCTTTCTTAGAAGTTAAATTCACAGCATAATTCTGGCTAAATTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTTCTTAGAAGTTAAATTCACAGCATAATTCTGGCTAAATTCAAA  100

seq1  GACATAAGCTTTAGTCAAAGGAGTACACATCTCTTCAAGCTATTCAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAGCTTTAGTCAAAGGAGTACACATCTCTTCAAGCTATTCAATAC  150

seq1  AGCATGATTTCATTTTTGACACACTAAGGAACAACACAGTAACACAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGATTTCATTTTTGACACACTAAGGAACAACACAGTAACACAAAAG  200

seq1  AAACTCAGAAGCCATTAATGAATAAAGCATAATTCCTCAATGTTTTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGAAGCCATTAATGAATAAAGCATAATTCCTCAATGTTTTAATA  250

seq1  AACCACAATATAAACTGATACATAAAAGTGTTTTAAATTAACATATCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAATATAAACTGATACATAAAAGTGTTTTAAATTAACATATCATA  300

seq1  TAATGCTTAAGCACATGCTGACACCTAACCTCTGCTCTTCTTCAGAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTTAAGCACATGCTGACACCTAACCTCTGCTCTTCTTCAGAATTA  350

seq1  CCTGTAAGGGAGGAAATGAAGATATATATTATAGCTATGAAAAACAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAGGGAGGAAATGAAGATATATATTATAGCTATGAAAAACAAGTC  400

seq1  AGAATCACTGATCTGCAAGGTAAATGTTCTACATTTCTCTAGCACAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCACTGATCTGCAAGGTAAATGTTCTACATTTCTCTAGCACAGTCT  450

seq1  ACCTCTCTCAATAAATGGAAACATCTCTAGATTACCCAAACTGGTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCTCAATAAATGGAAACATCTCTAGATTACCCAAACTGGTTTTAT  500

seq1  ACTCACTTTCATTCACAAACTTTGCCAATTATAATCCGAAGTATCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTTCATTCACAAACTTTGCCAATTATAATCCGAAGTATCAAACT  550

seq1  GGTTGATTTCAAAACAGGTTTTGGGTATCATGTCATGTCATCCCCCCGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATTTCAAAACAGGTTTTGGGTATCATGTCATGTCATCCCCCCGTC  600

seq1  CCCCCCCAACAAATTAATGATCTAAAGTATTAAAAAAAAACAGTTCTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCAACAAATTAATGATCTAAAGTATTAAAAAAAAACAGTTCTCAA  650

seq1  ACTCAAAACAACTATAAAGTAGTATCAAACAGTATAAATCCATCACAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAACAACTATAAAGTAGTATCAAACAGTATAAATCCATCACAATA  700

seq1  TAAAACATCTCACAATTAAACTTGAATTTTAACAGCTGGTCATCTTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATCTCACAATTAAACTTGAATTTTAACAGCTGGTCATCTTACAT  750

seq1  TGAATAACTTGCTTCATATACAATTTTCAAAACATAAAATGTTACGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAACTTGCTTCATATACAATTTTCAAAACATAAAATGTTACGGAAA  800

seq1  TAAAACAAAGAGAAATATTAAATTGTAAAAATTCTGGAAGGATGAGGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAGAGAAATATTAAATTGTAAAAATTCTGGAAGGATGAGGCCC  850

seq1  TAAGTTAGCTTCAAAACTATACAAATAAAAATAAAAATGTAAAAGAAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAGCTTCAAAACTATACAAATAAAAATAAAAATGTAAAAGAAACT  900

seq1  GGCTATTACAGTTTAAAAAGAAAAATAGACCTCAGGTTCCGTGGGTTGGG  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGCTATTACAGTTTAAAAAGAAAAATAGACCTCAGTTTCCGTGGGTTGGG  950

seq1  TCTGCTAAGGCTGATGACCTGTGTCTCATCCCACATTGTGGAGAAGACCA  1000
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TCTGCTAA-GCTGATGACCTGTGTCTCATCCCACATTGTGGAG-AGACCA  998

seq1  ACTGCCAAAAGTTGCCCTGACCTCTACAGGTATGCCTTGACAAGTG-CAC  1049
      |||||| ||||||||||||||||||||||||||||  |||| |||| | |
seq2  ACTGCC-AAAGTTGCCCTGACCTCTACAGGTATGC--TGAC-AGTGCCCC  1044

seq1  ACACACACAAACACACG-CACACATGCATGCAG  1081
      | ||||||||||||||| |||||||||||||||
seq2  AAACACACAAACACACGCCACACATGCATGCAG  1077


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