BAC Information

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BAC

Clone NameB6Ng01-182M03
Chromosome10 (Build37)
Map Location 31,358,030 - 31,359,190
singlet/doubletsinglet
Overlap geneLOC667752
Upstream geneNcoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055
Downstream geneLOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182M03.bB6Ng01-182M03.g
ACCGA008565GA008566
length1,1721,177
definitionB6Ng01-182M03.b B6Ng01-182M03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgcagatcaggttggccttaaactcacagagatctacttt
cctttgcctccagaatgctgggattaaagatgtgtggaccaagcttggtt
ttgtttgtttgtttgtttgtttatcttctgtccaaagtttcctttgtttg
cagagggttttgtttctttgtttttgagttgggaggaaggtctgtttact
caccagaactcatagatgtctatgtagttttaccggcagtaattagaccg
gcattcaatgatgaccttcttccttgtgtaaactaaagcttgagagctgg
cttttaatttccagagaagcatgcctatttcctatgcagctgggaaacta
ctaactagctttggaagtgagtattccttcttggtcatctctgtgcatca
ggtaagagtggtaagctctaacaacacaaatactgtagcatcaaagccac
caagttataggacctcggtgaaaggggaacagattttggtgagatttggt
caaagcaaacctctctaaatcaggcttctcttagaatgaacagtggttga
gtcagttatcctatgtgaatcaaaactggttcacatcccttgtgatgctt
agatagaaaaccaaaaatatgggctgtctctaattaagttcagagaatct
aagttcctatggaaccaaacaaacaattatgtctaatattggctcaaaca
tgctctctgggttctgaatagatgatggtgtagtgattgagagtagaaga
aatgatctcaatcttgttggcttatgcaaactacaaatatttctttcggt
agggcacaaagtaatccttgtccttaagaatctctaatgacgcccagtca
caggagcccgccctgcctgcagtttcctgaactaagtgcttctgcccacc
cagagcaactgattctaaggcctgactctagcaatggccttcgcaatctg
tgcaaagtacttttcagtgacccctgctgccggaagatcctgcaagatgg
agggctgccggtgggtgaggaccttggagtaggaggagctgacagccaag
ctttcagactgtgaaggtcctatcattccggttcgcttactaatggtcca
cttgtccatgttcatcattgcagcgaagaagctcctagttgggtgggcaa
agcttggtacacggtcgtggac
gaattctcacctaaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatccaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcgaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttgttg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgagc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtaaggtgacccaatcataaa
ggaactctcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacacattaaactcaa
gagaacgaagaccaaagtgtggacactttgccccttcttagaataggaaa
caaaacactcatggaaggagttacagagacaaaatttggaagtgtgatga
aaggatggaccatctagcgattgccatatccagtgatccatcccatgatc
agcttccaaacgctgacaccattgcatacactagcaagatttcgctgaaa
ggacccagatatagctgtctcttgtgagactatgccaggggcctagcaaa
cacagaagtgggatgctcacagtcagctattgggatggatcacaggccgc
caatggaggagctagagaaagcacccaggaactaaagggactgcactcta
taggtagaacaacatatgaactaccagtaccctgagctcttgtttctagc
tgcatatgtatcaaaagatgctattaggccatcacttgaaaagagaggcc
caatgactcttttatatgccagtacaggatgcgaaggtcaaaatggagtt
gtgtggactatgggaggccaatctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31358030_31359190
seq2: B6Ng01-182M03.b_42_1213

seq1  GAATTCACTTTGCAGATCAGGTTGGCCTTAAACTCACAGAGATCTACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGCAGATCAGGTTGGCCTTAAACTCACAGAGATCTACTTT  50

seq1  CCTTTGCCTCCAGAATGCTGGGATTAAAGATGTGTGGACCAAGCTTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCCTCCAGAATGCTGGGATTAAAGATGTGTGGACCAAGCTTGGTT  100

seq1  TTGTTTGTTTGTTTGTTTGTTTATCTTCTGTCCAAAGTTTCCTTTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTGTTTATCTTCTGTCCAAAGTTTCCTTTGTTTG  150

seq1  CAGAGGGTTTTGTTTCTTTGTTTTTGAGTTGGGAGGAAGGTCTGTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTTTTGTTTCTTTGTTTTTGAGTTGGGAGGAAGGTCTGTTTACT  200

seq1  CACCAGAACTCATAGATGTCTATGTAGTTTTACCGGCAGTAATTAGACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAACTCATAGATGTCTATGTAGTTTTACCGGCAGTAATTAGACCG  250

seq1  GCATTCAATGATGACCTTCTTCCTTGTGTAAACTAAAGCTTGAGAGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAATGATGACCTTCTTCCTTGTGTAAACTAAAGCTTGAGAGCTGG  300

seq1  CTTTTAATTTCCAGAGAAGCATGCCTATTTCCTATGCAGCTGGGAAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTTCCAGAGAAGCATGCCTATTTCCTATGCAGCTGGGAAACTA  350

seq1  CTAACTAGCTTTGGAAGTGAGTATTCCTTCTTGGTCATCTCTGTGCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAGCTTTGGAAGTGAGTATTCCTTCTTGGTCATCTCTGTGCATCA  400

seq1  GGTAAGAGTGGTAAGCTCTAACAACACAAATACTGTAGCATCAAAGCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAGTGGTAAGCTCTAACAACACAAATACTGTAGCATCAAAGCCAC  450

seq1  CAAGTTATAGGACCTCGGTGAAAGGGGAACAGATTTTGGTGAGATTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTATAGGACCTCGGTGAAAGGGGAACAGATTTTGGTGAGATTTGGT  500

seq1  CAAAGCAAACCTCTCTAAATCAGGCTTCTCTTAGAATGAACAGTGGTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAACCTCTCTAAATCAGGCTTCTCTTAGAATGAACAGTGGTTGA  550

seq1  GTCAGTTATCCTATGTGAATCAAAACTGGTTCACATCCCTTGTGATGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTATCCTATGTGAATCAAAACTGGTTCACATCCCTTGTGATGCTT  600

seq1  AGATAGAAAACCAAAAATATGGGCTGTCTCTAATTAAGTTCAGAGAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAAACCAAAAATATGGGCTGTCTCTAATTAAGTTCAGAGAATCT  650

seq1  AAGTTCCTATGGAACCAAACAAACAATTATGTCTAATATTGGCTCAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTATGGAACCAAACAAACAATTATGTCTAATATTGGCTCAAACA  700

seq1  TGCTCTCTGGGTTCTGAATAGATGATGGTGTAGTGATTGAGAGTAGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTGGGTTCTGAATAGATGATGGTGTAGTGATTGAGAGTAGAAGA  750

seq1  AATGATCTCAATCTTGTTGGCTTATGCAAACTACAAATATTTCTTTCGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCTCAATCTTGTTGGCTTATGCAAACTACAAATATTTCTTTCGGT  800

seq1  AGGGCACAAAGTAATCCTTGTCCTTAAGAATCTCTAATGACGCCCAGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACAAAGTAATCCTTGTCCTTAAGAATCTCTAATGACGCCCAGTCA  850

seq1  CAGGAGCCCGCCCTGCCTGCAGTTTCCTGAACTAAGTGCTTCTGCCCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCCGCCCTGCCTGCAGTTTCCTGAACTAAGTGCTTCTGCCCACC  900

seq1  CAGAGCAACTGATTCTAAGGCCTGACTCTAGCAATGGCCTTCGCAAATCT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGAGCAACTGATTCTAAGGCCTGACTCTAGCAATGGCCTTCGC-AATCT  949

seq1  GTGCAAAGTACTTTTCAGTGACCCCTGCTGCCGGAAGATCCTGCAAGATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAGTACTTTTCAGTGACCCCTGCTGCCGGAAGATCCTGCAAGATG  999

seq1  GAGGGCTGCCGGT-GGTGAAGAACTT-GAGTAAGGAGGAGCTGACAGCAA  1048
      ||||||||||||| ||||| || ||| |||| |||||||||||||||| |
seq2  GAGGGCTGCCGGTGGGTGAGGACCTTGGAGT-AGGAGGAGCTGACAGCCA  1048

seq1  AGCTTCAGGACTGTGAAGGTCCTATCA-TCCGGTCAGC-TACTAATG--T  1094
      |||||   ||||||||||||||||||| ||||||  || ||||||||   
seq2  AGCTTTCAGACTGTGAAGGTCCTATCATTCCGGTTCGCTTACTAATGGTC  1098

seq1  CAC-TGTCCATG-TCATCAATGCAGCAGAGAAGCTCCAGGT--GGTGGGC  1140
      ||| |||||||| |||||| ||||||  |||||||||  ||  |||||||
seq2  CACTTGTCCATGTTCATCATTGCAGCGAAGAAGCTCCTAGTTGGGTGGGC  1148

seq1  AAGGC-TGGTACA--GGCGTGGAC  1161
      || || |||||||  | |||||||
seq2  AAAGCTTGGTACACGGTCGTGGAC  1172