BAC Information

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BAC

Clone NameB6Ng01-184D22
Chromosome10 (Build37)
Map Location 36,496,727 - 36,653,512
singlet/doubletdoublet
Overlap geneHs3st5
Upstream geneLOC667860
Downstream geneHdac2, Marcks, LOC100040846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184D22.bB6Ng01-184D22.g
ACCGA009669GA009670
length1,1691,010
definitionB6Ng01-184D22.b B6Ng01-184D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,652,314 - 36,653,512)(36,496,727 - 36,497,540)
sequence
gaattcagtcatatttttacaacatactgtgtatttgattcaatcctgat
ttaaaatattattcttatgatgatgaaatgtcaagctcataaaggtctat
tcagattaggaaaagctaatataaaatgtatgtcaaactacttgtgtttt
gctagtatgtggccactgcatgctgttggggcccaggagtcacctcacaa
atcatacaaacactgatctcagtcagacagggatagtttattgagcatgc
cccacaggactattcaaacaagtgccatggtccaaattcaggaaccaaac
catgccattgagttatgatcctacaatgtttttaagcccaaaatccacaa
atatctgtgccaagttacttcaagaatcaggattaagggataggggattt
ccgtaggatcatatctttattgtacatttatcctgctcccattggttggg
gtattcaactgtggcaggggacttgccttgtctaacattcatgtcttaac
atgccaaccaggatgtaagtagcccacatgcatatctctttctgctaagt
aggaagtcagttcccatggaggtcttgggaacttaaacattactggacca
ctactcaaaatggaaattttatttcaaattgtttcttatattgatacagg
tatctcttttatgttggagtccattccaggggcagtttataccataaaag
cttaaacttaagtacaggaagtgctgttgggtggttggttctggtccaag
catattgtgggtatatataaaaaaacagttctactgactttctattgtga
ttgatttccaaaggcacagaacataacagaatatgtaatcaatcttagca
ttagaaaatttcctagtaacagcaaaagaatatgataaagtttccttaca
atgggcaggcaagccaggtaacattttctaggccttaacattttacctaa
gtcttaacattaatttagggcttatattttacctagatctaacatgttgt
tctgactgggcttgatatgtgatggatgtattcttctctgccacagccac
tagctctccatttactctgtttcctgttataaatcaatacatagggattc
aaatattattaatatgacattgaagcgttttacgtactactttatgcagt
ctgaaaaatagcgttattg

gaattctcttagcacaaaacccaacttcaaagtacacttgttcactagag
gggaaatgtgtctgttcactgggtatctgaatgcacacatatctctagct
cttagcaactgttggaggaatagagtacatttccatgccctcttacttgc
ttgccgggagattagaaaaaccataaagaaatccctatattttcaaagta
aaagccaaaaccccaccatgttttgtatagcaggacttttcaatatgaaa
aaaataaaaatacataggcttcatttggcaattagagcatcaaacaagct
attgaaaatataagccattcaggtgacatcagatgctggcgtggatgtgg
agaaagaggaacactcctccattgttggtgggattgcaggcttgtacaac
tgttgcgcgcgctcaacaggccaggaagaacgacgctgctacaggatcct
tctgcacacatttattcagtcctgtttcttctttctccatatatctccct
tgtttatatctcccttgtttttatatctcccttgtttttatatctccctt
gtttttatatctcccttgtttatatctcccccactaatagtaatcctctc
tcgaataataatcctccctctaacccgggcctctcactcttatatactct
cagttcccatccacgcacagcaggccacaccccctcgccagtcacgaggc
ttcagctaatcagggcagcaggggcaaatctccaccaaaattggattcac
ctgtatcctggtacacctgcgcagcactcaagatgtttgtgtcttatatg
aggaagtcaggtgcaagtcatatgacttagctgcagtccctggcgccttt
aggactgccgccacacctgctcctaacatctccccctttttttctttttc
tggcagagagaatgtctgtagattagcccccccgcagcccatgccccctt
acccgtccttgggtgacaaaacaagcattgggtttgatccctgtctaagg
ttggtgacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36652314_36653512
seq2: B6Ng01-184D22.b_44_1212 (reverse)

seq1  CAATAAC-CTA-TTTTCAGAACTGGCAATAAAGTAGTACAGTATAAAAAA  48
      ||||||| ||| ||||||| ||||   |||||||||||| ||   |||| 
seq2  CAATAACGCTATTTTTCAG-ACTG--CATAAAGTAGTAC-GT---AAAAC  43

seq1  ACTTCAAAATTGTCCATATTTAAATAATATTTGAATTCCTATTGTATTTG  98
       ||||||   ||| ||||||  |||||||||||||| |||| |||| |||
seq2  GCTTCAA---TGT-CATATT--AATAATATTTGAATCCCTA-TGTA-TTG  85

seq1  ATTTTATAACCAGAAAACCAAGAGGTAAAT-GAGAGCCTAGGTGGCTGGT  147
      | ||||||| ||| ||||  ||| |||||| ||||| ||| |||||| ||
seq2  A-TTTATAA-CAGGAAAC--AGA-GTAAATGGAGAG-CTA-GTGGCT-GT  127

seq1  GGCAGGAGAAAGAAATAACATCCATTCACATATCCAAGCCCAGTCAGAAA  197
      |||| ||| |||||   ||||||| |||||||| ||||||||||||||| 
seq2  GGCA-GAG-AAGAA--TACATCCA-TCACATAT-CAAGCCCAGTCAGAA-  170

seq1  CAAACATTGTTAGGATCTAGGTAAAATATTAAGCCCTAAATTAAATGTTA  247
        |||| ||||| ||||||||||||||| ||||||||||||| |||||||
seq2  -CAACA-TGTTA-GATCTAGGTAAAATA-TAAGCCCTAAATT-AATGTTA  215

seq1  AGACTTAGGTAAAATGTTAAGGCCTAGAAAATGTTACCTGGCTTGCCTG-  296
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGACTTAGGTAAAATGTTAAGGCCTAGAAAATGTTACCTGGCTTGCCTGC  265

seq1  CCATTGTAAGGAAACTTTATCATATTCTTTTGCTGTTACTAGGAAATTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTAAGGAAACTTTATCATATTCTTTTGCTGTTACTAGGAAATTTT  315

seq1  CTAATGCTAAGATTGATTACATATTCTGTTATGTTCTGTGCCTTTGGAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCTAAGATTGATTACATATTCTGTTATGTTCTGTGCCTTTGGAAA  365

seq1  TCAATCACAATAG-AAGTCAGTAGAACTGTTTTTTTATATATACCCACAA  445
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAATCACAATAGAAAGTCAGTAGAACTGTTTTTTTATATATACCCACAA  415

seq1  TATGCTTGGACCAGAACCAACCACCCAACAGCACTTCCTGTACTTAAGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTGGACCAGAACCAACCACCCAACAGCACTTCCTGTACTTAAGTT  465

seq1  TAAGCTTTTATGGTATAAACTGCCCCTGGAATGGACTCCAACATAAAAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTTTATGGTATAAACTGCCCCTGGAATGGACTCCAACATAAAAGA  515

seq1  GATACCTGTATCAATATAAGAAACAATTTGAAATAAAATTTCCATTTTGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTGTATCAATATAAGAAACAATTTGAAATAAAATTTCCATTTTGA  565

seq1  GTAGTGGTCCAGTAATGTTTAAGTTCCCAAGACCTCCATGGGAACTGACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGTCCAGTAATGTTTAAGTTCCCAAGACCTCCATGGGAACTGACT  615

seq1  TCCTACTTAGCAGAAAGAGATATGCATGTGGGCTACTTACATCCTGGTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTTAGCAGAAAGAGATATGCATGTGGGCTACTTACATCCTGGTTG  665

seq1  GCATGTTAAGACATGAATGTTAGACAAGGCAAGTCCCCTGCCACAGTTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTAAGACATGAATGTTAGACAAGGCAAGTCCCCTGCCACAGTTGA  715

seq1  ATACCCCAACCAATGGGAGCAGGATAAATGTACAATAAAGATATGATCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCAACCAATGGGAGCAGGATAAATGTACAATAAAGATATGATCCT  765

seq1  ACGGAAATCCCCTATCCCTTAATCCTGATTCTTGAAGTAACTTGGCACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAATCCCCTATCCCTTAATCCTGATTCTTGAAGTAACTTGGCACAG  815

seq1  ATATTTGTGGATTTTGGGCTTAAAAACATTGTAGGATCATAACTCAATGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTGGATTTTGGGCTTAAAAACATTGTAGGATCATAACTCAATGG  865

seq1  CATGGTTTGGTTCCTGAATTTGGACCATGGCACTTGTTTGAATAGTCCTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTTGGTTCCTGAATTTGGACCATGGCACTTGTTTGAATAGTCCTG  915

seq1  TGGGGCATGCTCAATAAACTATCCCTGTCTGACTGAGATCAGTGTTTGTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATGCTCAATAAACTATCCCTGTCTGACTGAGATCAGTGTTTGTA  965

seq1  TGATTTGTGAGGTGACTCCTGGGCCCCAACAGCATGCAGTGGCCACATAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTGAGGTGACTCCTGGGCCCCAACAGCATGCAGTGGCCACATAC  1015

seq1  TAGCAAAACACAAGTAGTTTGACATACATTTTATATTAGCTTTTCCTAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAACACAAGTAGTTTGACATACATTTTATATTAGCTTTTCCTAAT  1065

seq1  CTGAATAGACCTTTATGAGCTTGACATTTCATCATCATAAGAATAATATT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAGACCTTTATGAGCTTGACATTTCATCATCATAAGAATAATATT  1115

seq1  TTAAATCAGGATTGAATCAAATACACAGTATGTTGTAAAAATATGACTGA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCAGGATTGAATCAAATACACAGTATGTTGTAAAAATATGACTGA  1165

seq1  ATTC  1199
      ||||
seq2  ATTC  1169


seq1: chr10_36496727_36497540
seq2: B6Ng01-184D22.g_65_879

seq1  GAATTCTCTTAGCACAAAACCCAACTTCAAAGTACACTTGTTCACTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGCACAAAACCCAACTTCAAAGTACACTTGTTCACTAGAG  50

seq1  GGGAAATGTGTCTGTTCACTGGGTATCTGAATGCACACATATCTCTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGTGTCTGTTCACTGGGTATCTGAATGCACACATATCTCTAGCT  100

seq1  CTTAGCAACTGTTGGAGGAATAGAGTACATTTCCATGCCCTCTTACTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAACTGTTGGAGGAATAGAGTACATTTCCATGCCCTCTTACTTGC  150

seq1  TTGCCGGGAGATTAGAAAAACCATAAAGAAATCCCTATATTTTCAAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGGGAGATTAGAAAAACCATAAAGAAATCCCTATATTTTCAAAGTA  200

seq1  AAAGCCAAAACCCCACCATGTTTTGTATAGCAGGACTTTTCAATATGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAAACCCCACCATGTTTTGTATAGCAGGACTTTTCAATATGAAA  250

seq1  AAAATAAAAATACATAGGCTTCATTTGGCAATTAGAGCATCAAACAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAATACATAGGCTTCATTTGGCAATTAGAGCATCAAACAAGCT  300

seq1  ATTGAAAATATAAGCCATTCAGGTGACATCAGATGCTGGCGTGGATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATATAAGCCATTCAGGTGACATCAGATGCTGGCGTGGATGTGG  350

seq1  AGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAAC  400

seq1  TGTTGCGCGCGCTCAACAGGCCAGGAAGAACGACGCTGCTACAGGATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCGCGCGCTCAACAGGCCAGGAAGAACGACGCTGCTACAGGATCCT  450

seq1  TCTGCACACATTTATTCAGTCCTGTTTCTTCTTTCTCCATATATCTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACACATTTATTCAGTCCTGTTTCTTCTTTCTCCATATATCTCCCT  500

seq1  TGTTTATATCTCCCTTGTTTTTATATCTCCCTTGTTTTTATATCTCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATATCTCCCTTGTTTTTATATCTCCCTTGTTTTTATATCTCCCTT  550

seq1  GTTTTTATATCTCCCTTGTTTATATCTCCCCCACTAATAGTAATCCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATATCTCCCTTGTTTATATCTCCCCCACTAATAGTAATCCTCTC  600

seq1  TCGAATAATAATCCTCCCTCTAACCCGGGCCTCTCACTCTTATATACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATAATAATCCTCCCTCTAACCCGGGCCTCTCACTCTTATATACTCT  650

seq1  CAGTTCCCATCCACGCACAGCAGGCCACACCCCCTCGCCAGTCACGAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCATCCACGCACAGCAGGCCACACCCCCTCGCCAGTCACGAGGC  700

seq1  TTCAGCTAATCAGGGCAGCAGGGGCAAATCTCCACC-AAATTGGATTCAC  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCAGCTAATCAGGGCAGCAGGGGCAAATCTCCACCAAAATTGGATTCAC  750

seq1  CTGTATCCTGGTACACCTGCGCAGCACTCAAGATGTTTGTGTCTTATATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCCTGGTACACCTGCGCAGCACTCAAGATGTTTGTGTCTTATATG  800

seq1  AGGAAGTCAGGTGCA  814
      |||||||||||||||
seq2  AGGAAGTCAGGTGCA  815


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