BAC Information

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BAC

Clone NameB6Ng01-186J09
Chromosome10 (Build37)
Map Location 114,007,719 - 114,008,858
singlet/doubletsinglet
Overlap geneTrhde
Upstream geneLOC100042666
Downstream gene4930473D10Rik, Tph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186J09.bB6Ng01-186J09.g
ACCGA011385GA011386
length1,141409
definitionB6Ng01-186J09.b B6Ng01-186J09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaacttccatcacatatacagttaaaaaccagtctattttata
tatatataaaatgactttagaagtgaattctggggctctattcatgttat
ttaaaaatgactctgcattaccgaaagataatttagtcatttctctaagt
cattgctcttgcagtattttgctgacaggctctttgtgaacacctgtagt
cactttttcctgccatgtgtaaaactcatttttttgcgtgttctcccaac
tgtattttctcaacatttctgtcaataatcttcaacttttctgtttaatt
cctattatcactaaaagccatatagttatttcaaagcatgaaaaaatgct
tgaaatatcccttaataccaagcctccttcagcaacagactgttctatga
catcattcacactccctctcttaggataatggctacttcctgactattgg
ctcgattagccatctggtataccacagctataaatctacacttattatgt
cataatgcatgtttctgaccatttattaagacccaactcttcaatgtgat
catcgaggatttgagtggtgtggcttttttaattgcatgtttactctgcc
ctggatttgcccctttccagctgcttcctcctcacctctcacctactttc
ttggatgctgcctcctctgctaaaccttcctgaactaattaaacatttca
tcctctgtgttttatagcacacccactgtattacgatagtgtctgtgtgt
gccggtctttctattgtacttcctttctattcttgagttcaagattatga
agaagcctttaatcatccatttattccacaagtatagagtgggaattaaa
tatatatttattaaagaaataagtagccaaataaaatagtggctgtgtgg
gtttttgtgaaaaattctttagttttctgagatgatttttaaagttctta
agtctatatcaatacatctatatcacatagctatatctgtactatcatct
atcatctactatctatcaatctatctatatctatctatctatcatctatc
tatctatcatccattcatctatctatctatcaatatggaaaacaaatgat
actgaatatcacctgtaacttgtatgacatcatgttataaa

cttacatttgaacacttcacagttctcagcatggctcatagtcattcaac
acttaatatggtagatatttctctgcaggtaatgggttaaggaaatgtgt
gtgtgtgtgtgtgtgtgtgtgtttacatgcatgtatgtagatatgagtat
gtgcaaaaatgtgtgaatgggggatatataaatgactggtggtataaatc
gaggttctccccctccttggcagctgggcagcttaaacttgggggaaggg
ctccctcccttatgaacccctgcggctgcttccatccccctccctgtggc
tctggaattcttggtggagcccactcctccggccctgtggagctaacccc
ctcccgtgtgctggttgcggctgggtgtgcgggacttggagcacggatca
tccctggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_114007719_114008858
seq2: B6Ng01-186J09.b_42_1182 (reverse)

seq1  TTTAT-ACATGATGTCATTACAAGTTACA-GTGATA-TCAGTATCATTTT  47
      ||||| ||||||||||| ||||||||||| |||||| |||||||||||| 
seq2  TTTATAACATGATGTCA-TACAAGTTACAGGTGATATTCAGTATCATTT-  48

seq1  GTTTTTCAATATTGATAGATAGATAGATAGAT---AGATAGATAGATAGA  94
        ||||| ||||||||||||||||||||  ||    ||||||||||||||
seq2  -GTTTTCCATATTGATAGATAGATAGATGAATGGATGATAGATAGATAGA  97

seq1  TGATAGATAGATAGATTATAGATAGATTGATAGATAGGTAGATGATAGAT  144
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  TGATAGATAGATAGA-TATAGATAGATTGATAGATA-GTAGATGATAGAT  145

seq1  GATAGTACAGATATAGCTATGTTGATATAGATGTATTGATATAGACTTAA  194
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GATAGTACAGATATAGCTATG-TGATATAGATGTATTGATATAGACTTAA  194

seq1  GAACTTTAAAAATCATCTCAGAAAACTAAAGAATTTTTCACAAAAA-CCA  243
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAACTTTAAAAATCATCTCAGAAAACTAAAGAATTTTTCACAAAAACCCA  244

seq1  CACAGCCACTATTTTATTTGGCTACTTATTTCTTTAATAAATATATATTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCACTATTTTATTTGGCTACTTATTTCTTTAATAAATATATATTT  294

seq1  AATTCCCACTCTATACTTGTGGAATAAATGGATGATTAAAGGCTTCTTCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCACTCTATACTTGTGGAATAAATGGATGATTAAAGGCTTCTTCA  344

seq1  TAATCTTGAACTCAAGAATAGAAAGGAAGTACAATAGAAAGACCGGCACA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTGAACTCAAGAATAGAAAGGAAGTACAATAGAAAGACCGGCACA  394

seq1  CACAGACACTATCGTAATACAGTGGGTGTGCTATAAAACACAGAGGATGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACACTATCGTAATACAGTGGGTGTGCTATAAAACACAGAGGATGA  444

seq1  AATGTTTAATTAGTTCAGGAAGGTTTAGCAGAGGAGGCAGCATCCAAGAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTAATTAGTTCAGGAAGGTTTAGCAGAGGAGGCAGCATCCAAGAA  494

seq1  AGTAGGTGAGAGGTGAGGAGGAAGCAGCTGGAAAGGGGCAAATCCAGGGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTGAGAGGTGAGGAGGAAGCAGCTGGAAAGGGGCAAATCCAGGGC  544

seq1  AGAGTAAACATGCAATTAAAAAAGCCACACCACTCAAATCCTCGATGATC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAACATGCAATTAAAAAAGCCACACCACTCAAATCCTCGATGATC  594

seq1  ACATTGAAGAGTTGGGTCTTAATAAATGGTCAGAAACATGCATTATGACA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAAGAGTTGGGTCTTAATAAATGGTCAGAAACATGCATTATGACA  644

seq1  TAATAAGTGTAGATTTATAGCTGTGGTATACCAGATGGCTAATCGAGCCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTGTAGATTTATAGCTGTGGTATACCAGATGGCTAATCGAGCCA  694

seq1  ATAGTCAGGAAGTAGCCATTATCCTAAGAGAGGGAGTGTGAATGATGTCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAGGAAGTAGCCATTATCCTAAGAGAGGGAGTGTGAATGATGTCA  744

seq1  TAGAACAGTCTGTTGCTGAAGGAGGCTTGGTATTAAGGGATATTTCAAGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAGTCTGTTGCTGAAGGAGGCTTGGTATTAAGGGATATTTCAAGC  794

seq1  ATTTTTTCATGCTTTGAAATAACTATATGGCTTTTAGTGATAATAGGAAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCATGCTTTGAAATAACTATATGGCTTTTAGTGATAATAGGAAT  844

seq1  TAAACAGAAAAGTTGAAGATTATTGACAGAAATGTTGAGAAAATACAGTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGAAAAGTTGAAGATTATTGACAGAAATGTTGAGAAAATACAGTT  894

seq1  GGGAGAACACGCAAAAAAATGAGTTTTACACATGGCAGGAAAAAGTGACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAACACGCAAAAAAATGAGTTTTACACATGGCAGGAAAAAGTGACT  944

seq1  ACAGGTGTTCACAAAGAGCCTGTCAGCAAAATACTGCAAGAGCAATGACT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGTTCACAAAGAGCCTGTCAGCAAAATACTGCAAGAGCAATGACT  994

seq1  TAGAGAAATGACTAAATTATCTTTCGGTAATGCAGAGTCATTTTTAAATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAATGACTAAATTATCTTTCGGTAATGCAGAGTCATTTTTAAATA  1044

seq1  ACATGAATAGAGCCCCAGAATTCACTTCTAAAGTCATTTTATATATATAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAATAGAGCCCCAGAATTCACTTCTAAAGTCATTTTATATATATAT  1094

seq1  AAAATAGACTGGTTTTTAACTGTATATGTGATGGAAGTTAAGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGACTGGTTTTTAACTGTATATGTGATGGAAGTTAAGAATTC  1141


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