BAC Information

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BAC

Clone NameB6Ng01-186M03
Chromosome10 (Build37)
Map Location 8,482,312 - 8,643,696
singlet/doubletdoublet
Overlap geneSash1
Upstream geneKatna1, BC013529, Ppil4, LOC665035, Zc3h12d, Map3k7ip2, LOC100039046, Ust, LOC100039173
Downstream geneEG666625, LOC666636, E130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186M03.bB6Ng01-186M03.g
ACCGA011517GA011518
length8721,152
definitionB6Ng01-186M03.b B6Ng01-186M03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,642,825 - 8,643,696)(8,482,312 - 8,483,474)
sequence
gaattcaccccagatatttccattgtgagggccaataatctccctttggt
ttaaaccgatatgaatagctggataatgttggataacaacattatcaaag
gaaacctatgtaaattcacaccagtgacactcatttctgtaggacgcttc
tcactgatgcctaagtgccgtgcaacataatcatcatgtacatcaataag
tctctggcagattaatgtaacgtcttgagttttagtcgctgacattacta
aacaccatacacatgcacactctggcttttcacttcttgctgcatacaaa
tcgatcagctactgataagactttttttttcttcaaagtccataatatca
gtagatttatatgcagggaaatgagggaccaaagattggtcaacgaaatt
atcaccctcatttccacagggatgtgtcatcactgactgactaggacatg
gttgaaaaacagagattaatagcttgcccatactcgcttcaagcaaaatc
agtttaaagtagcctttaaaagggtgaaagattaatgcaaagaggaggca
ggagagtagggggtgggacaggggtgaggggcggagagcatacagcagaa
ctgccttctttcagcctctctagcctcggtgtttagatctgtgatatggt
tctgcctcatgggattggtaagggactaaatggagtgttgaaaaatagta
attaggggctggagagatggctcagcagttatgaacactgactgttcttc
caaaggtcctgaagtcaattcccaagcaaccagatggtggctcacaactg
tctgcaatgggatccagtgccttcttctatggtgtctgagacagtgtatt
tacataaaataaacaataaata

gaattccagagaaagaaagaaagaacgcgagaatctgagcgaatccggga
cagagggctaacccttccgagtgactgaactctaaaacagatcgcttctg
cagatgggcttccgaacgctccctgaggggcgtggtcaccattgaaagtg
gacacctttccagggctatttttgaaattactatcatggagcttgtgatt
ctggtttttctccctgacttatcattttctccctctccccatcccccccc
caccccctttctgttttaatagccagagtaaatgtaggcgatttcccctt
tcctggggcttctaaaactgtcttcccaaattgttccgaccgtcatttca
gggcagctgagttctcgggcattctggaacagcaagcctggggactatgt
cacatgattgtttaatcttggggagtcccaggggagcaccaggcacatgc
tgttactgaaacaggacataggctaaacaagacagagctgaaaaatggaa
gaaagaagtctccatgacgtgtcccttcccgtggctcacctcactgagtt
aacccaccgtgcggtttgccctaatcacagcgcgctgcctcttccaccgt
gagggccttccttatccatctctttagaggcggatacagatacacaacac
acataaaacacctggcagccagagctcaccgtgagtgccaatctctgtct
ccttaaaatagcagaaggacttttgggaggaggtctagggcttacttaaa
cgggggtaacatttgagacccaaagctcacaaaaggaaaggtcctgcttt
gcccagagtctccagtttagttggcagcctggcagccggtcttccccatt
ttctgggtccctcacctgctcctcttccctcccttccctcccctttcctt
tccctagaaagcattgactccatgcccctcccctccaagtctgctgtccc
agaagcctctcttctacttttaactgaactttctctttttcctgccacaa
ggattcgcatagcttccctgtactgctggctccccagatcacaaccaatt
ctccaaagcctgtggctcaccgcccgcccactgcatttcaggacaacgac
caaccaatggtgcaggtggattctggatgagctcgaccagcctgacattc
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_8642825_8643696
seq2: B6Ng01-186M03.b_45_916 (reverse)

seq1  TATTTATTTGTTTATTTTATGTAAATACACTGTCTTCAGACACACTAGAA  50
      |||||| ||||||||||||||||||||||||||| ||||||||  |||||
seq2  TATTTA-TTGTTTATTTTATGTAAATACACTGTC-TCAGACACCATAGAA  48

seq1  GAAGGCACTGGATCCCATTGCAGACAGTTGTGAGCCACCATCTGGTTGC-  99
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAGGCACTGGATCCCATTGCAGACAGTTGTGAGCCACCATCTGGTTGCT  98

seq1  TGGGAATTGAACTCAGGACCTTTGGAAGAACAGTCAGTGTTCATAACTGC  149
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTGACTTCAGGACCTTTGGAAGAACAGTCAGTGTTCATAACTGC  148

seq1  TGAGCCATCTCTCCAGCCCCTAATTACTA-TTTTCAACACTCCATTTAGT  198
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGAGCCATCTCTCCAGCCCCTAATTACTATTTTTCAACACTCCATTTAGT  198

seq1  CCCTTACCAATCCCATGAGGCAGAACCATATCACAGATCTAAACACCGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACCAATCCCATGAGGCAGAACCATATCACAGATCTAAACACCGAG  248

seq1  GCTAGAGAGGCTGAAAGAAGGCAGTTCTGCTGTATGCTCTCCGCCCCTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGAGGCTGAAAGAAGGCAGTTCTGCTGTATGCTCTCCGCCCCTCA  298

seq1  CCCCTGTCCCACCCCCTACTCTCCTGCCTCCTCTTTGCATTAATCTTTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTCCCACCCCCTACTCTCCTGCCTCCTCTTTGCATTAATCTTTCA  348

seq1  CCCTTTTAAAGGCTACTTTAAACTGATTTTGCTTGAAGCGAGTATGGGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTAAAGGCTACTTTAAACTGATTTTGCTTGAAGCGAGTATGGGCA  398

seq1  AGCTATTAATCTCTGTTTTTCAACCATGTCCTAGTCAGTCAGTGATGACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTAATCTCTGTTTTTCAACCATGTCCTAGTCAGTCAGTGATGACA  448

seq1  CATCCCTGTGGAAATGAGGGTGATAATTTCGTTGACCAATCTTTGGTCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGTGGAAATGAGGGTGATAATTTCGTTGACCAATCTTTGGTCCC  498

seq1  TCATTTCCCTGCATATAAATCTACTGATATTATGGACTTTGAAGAAAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCCTGCATATAAATCTACTGATATTATGGACTTTGAAGAAAAAA  548

seq1  AAAGTCTTATCAGTAGCTGATCGATTTGTATGCAGCAAGAAGTGAAAAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTATCAGTAGCTGATCGATTTGTATGCAGCAAGAAGTGAAAAGC  598

seq1  CAGAGTGTGCATGTGTATGGTGTTTAGTAATGTCAGCGACTAAAACTCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGTGCATGTGTATGGTGTTTAGTAATGTCAGCGACTAAAACTCAA  648

seq1  GACGTTACATTAATCTGCCAGAGACTTATTGATGTACATGATGATTATGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTACATTAATCTGCCAGAGACTTATTGATGTACATGATGATTATGT  698

seq1  TGCACGGCACTTAGGCATCAGTGAGAAGCGTCCTACAGAAATGAGTGTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGGCACTTAGGCATCAGTGAGAAGCGTCCTACAGAAATGAGTGTCA  748

seq1  CTGGTGTGAATTTACATAGGTTTCCTTTGATAATGTTGTTATCCAACATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGAATTTACATAGGTTTCCTTTGATAATGTTGTTATCCAACATT  798

seq1  ATCCAGCTATTCATATCGGTTTAAACCAAAGGGAGATTATTGGCCCTCAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTATTCATATCGGTTTAAACCAAAGGGAGATTATTGGCCCTCAC  848

seq1  AATGGAAATATCTGGGGTGAATTC  872
      ||||||||||||||||||||||||
seq2  AATGGAAATATCTGGGGTGAATTC  872


seq1: chr10_8482312_8483474
seq2: B6Ng01-186M03.g_66_1217

seq1  GAATTCCAGAGAAAGAAAGAAAGAACGCGAGAATCTGAGCGAATCCGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGAAAGAAAGAAAGAACGCGAGAATCTGAGCGAATCCGGGA  50

seq1  CAGAGGGCTAACCCTTCCGAGTGACTGAACTCTAAAACAGATCGCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGCTAACCCTTCCGAGTGACTGAACTCTAAAACAGATCGCTTCTG  100

seq1  CAGATGGGCTTCCGAACGCTCCCTGAGGGGCGTGGTCACCATTGAAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGCTTCCGAACGCTCCCTGAGGGGCGTGGTCACCATTGAAAGTG  150

seq1  GACACCTTTCCAGGGCTATTTTTGAAATTACTATCATGGAGCTTGTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTTTCCAGGGCTATTTTTGAAATTACTATCATGGAGCTTGTGATT  200

seq1  CTGGTTTTTCTCCCTGACTTATCATTTTCTCCCTCTCCCCATCCCCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTTTCTCCCTGACTTATCATTTTCTCCCTCTCCCCATCCCCCCCC  250

seq1  CACCCCCTTTCTGTTTTAATAGCCAGAGTAAATGTAGGCGATTTCCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCTTTCTGTTTTAATAGCCAGAGTAAATGTAGGCGATTTCCCCTT  300

seq1  TCCTGGGGCTTCTAAAACTGTCTTCCCAAATTGTTCCGACCGTCATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGCTTCTAAAACTGTCTTCCCAAATTGTTCCGACCGTCATTTCA  350

seq1  GGGCAGCTGAGTTCTCGGGCATTCTGGAACAGCAAGCCTGGGGACTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCTGAGTTCTCGGGCATTCTGGAACAGCAAGCCTGGGGACTATGT  400

seq1  CACATGATTGTTTAATCTTGGGGAGTCCCAGGGGAGCACCAGGCACATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATTGTTTAATCTTGGGGAGTCCCAGGGGAGCACCAGGCACATGC  450

seq1  TGTTACTGAAACAGGACATAGGCTAAACAAGACAGAGCTGAAAAATGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTGAAACAGGACATAGGCTAAACAAGACAGAGCTGAAAAATGGAA  500

seq1  GAAAGAAGTCTCCATGACGTGTCCCTTCCCGTGGCTCACCTCACTGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGTCTCCATGACGTGTCCCTTCCCGTGGCTCACCTCACTGAGTT  550

seq1  AACCCACCGTGCGGTTTGCCCTAATCACAGCGCGCTGCCTCTTCCACCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACCGTGCGGTTTGCCCTAATCACAGCGCGCTGCCTCTTCCACCGT  600

seq1  GAGGGCCTTCCTTATCCATCTCTTTAGAGGCGGATACAGATACACAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTTCCTTATCCATCTCTTTAGAGGCGGATACAGATACACAACAC  650

seq1  ACATAAAACACCTGGCAGCCAGAGCTCACCGTGAGTGCCAATCTCTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACACCTGGCAGCCAGAGCTCACCGTGAGTGCCAATCTCTGTCT  700

seq1  CCTTAAAATAGCAGAAGGACTTTTGGGAGGAGGTCTAGGGCTTACTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAATAGCAGAAGGACTTTTGGGAGGAGGTCTAGGGCTTACTTAAA  750

seq1  CGGGGGTAACATTTGAGACCCAAAGCTCACAAAAGG-AAGGTCCTGCTTT  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CGGGGGTAACATTTGAGACCCAAAGCTCACAAAAGGAAAGGTCCTGCTTT  800

seq1  GCCCAGAGTCTCCAGTTTAGTTGGCAGCCTGGCAGCCGGTCTTCCCCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAGTCTCCAGTTTAGTTGGCAGCCTGGCAGCCGGTCTTCCCCATT  850

seq1  TTCTGGGTCCCTCACCTGCTCCTCTTCCCTCCCTTCCCTCCCCTTTCCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGTCCCTCACCTGCTCCTCTTCCCTCCCTTCCCTCCCCTTTCCTT  900

seq1  TCCCTAGAAAGCATTGACTCCATGCCCCTCCCCTCCAAGTCTGCTGTCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGAAAGCATTGACTCCATGCCCCTCCCCTCCAAGTCTGCTGTCCC  950

seq1  AGAAGCCTCTCTTCTACTTTTAACTGAAACTTTCTCTTTTTCCTGCCACA  999
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAAGCCTCTCTTCTACTTTTAACTG-AACTTTCTCTTTTTCCTGCCACA  999

seq1  AGGATTCGCCATAGCTTCCCCTGTACTGCCTGGCTCCCCAGATCACAAAC  1049
      |||||||| |||||||| |||||||||| ||||||||||||||||| |||
seq2  AGGATTCG-CATAGCTT-CCCTGTACTG-CTGGCTCCCCAGATCAC-AAC  1045

seq1  CAATTCTCCCAAAGCCTGTGGCTTCACCGCCCG-CCACTGGCATTTCAGG  1098
      ||||||| |||||||||||||| |||||||||| ||||| ||||||||||
seq2  CAATTCT-CCAAAGCCTGTGGC-TCACCGCCCGCCCACT-GCATTTCAGG  1092

seq1  GCCACGGACCACACAAATGGTGGCAGGTGAGTTCTGGATGAAGTACGACC  1148
       | || ||||| || |||||| |||||||  ||||||||| ||  |||||
seq2  ACAAC-GACCA-ACCAATGGT-GCAGGTGGATTCTGGATG-AGCTCGACC  1138

seq1  AGCTCTGACATTCAG  1163
      ||| |||||||||||
seq2  AGC-CTGACATTCAG  1152


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