BAC Information

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BAC

Clone NameB6Ng01-188D23
Chromosome10 (Build37)
Map Location 102,214,562 - 102,215,690
singlet/doubletsinglet
Overlap genenone
Upstream geneMgat4c, LOC667652, Nts, Pamci
Downstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188D23.g
ACCGA012598
length1,121
definitionB6Ng01-188D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctatgaattcgttgtgagaacagagttcacaattcaagtcat
ttaccaaggaaacaaaaaaattaaaaatatacctaggtggagttatacat
agattttaggggcttttcaagtatatgctcaaagaactgagaatatgtga
actgaaaatataaaaatctaaagtaaaaaaatgaacaaattatttataaa
aatttaccttacttttgaacactttaacacattatttgtagatttttccc
aagtagccttgtagcctcaatagaatttctgacagttgtaatgcttattt
tgtctatttataaacacccataattcaagacttaaagaaaaacaaatagg
gcataaaaatgttaaaacagattttgttagagacacaaaaaatgtttaaa
tacatttaagaggaaaatagttatccctagtttttcccattaaaattcaa
ccaggatatgttggaggctaagtactacattgatgtgtaaattatgcaga
atatactacataacgctttcatgctacgcacataattcttaatacagtaa
tagccattattttcatgagacagaggcaccaaaatggtcctcccctcctc
cctatgtgaacaatttagagcactctatctcattatgtaatagaagctcc
tctcgtctgagcactttacagaggcaatggtgaagaacagcacatctcaa
attaaactaatgtataagagagctagctattctggagtgaggaatcaacc
atgtgacttctcaaacaagaaaacaacaaagcaattgtcaaattgcgaga
atcccaaattagttccatctatatgggtctctccttttgacatcagcatt
ttaggctggataatactttgctgtggagaattatctagtgcagctttgga
ggcccgagcagcatcataaatgcatataatagatgccagggatactgcct
agtttcatggccttagcctagctcagaaattgcaaatatccccttaggaa
atgaatcgtttctgctgggattacacttggttataagacacctaatcata
tgatatttgtgttgattgattagatgtccccccacagtacactggaacac
tttaggatggtcattatttga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_102214562_102215690
seq2: B6Ng01-188D23.g_64_1184 (reverse)

seq1  TCAAATAATGACATTCCCTAAGTGTT-CAGTGTACCTGT-GGGGGACATT  48
      ||||||||||||  |||  ||||||| ||||||| |||| ||||||||| 
seq2  TCAAATAATGACCATCCTAAAGTGTTCCAGTGTA-CTGTGGGGGGACAT-  48

seq1  CTTAATCAAACCACCACAAATATCATTATGATTTAGGTGTCTTTATAA-C  97
        ||||| || || ||||||||||| ||||| ||||||||| |||||| |
seq2  -CTAATC-AATCAACACAAATATCA-TATGA-TTAGGTGTC-TTATAACC  93

seq1  AAGTGTTAATTCCCAGCAGAAACGATTTCATTTCCT-AGGGGATATTTTG  146
      ||||||  | ||||||||||||||| |||||||||| |||||||| ||||
seq2  AAGTGT--AATCCCAGCAGAAACGA-TTCATTTCCTAAGGGGATA-TTTG  139

seq1  CAATTTCTGGAGCTAGGCTAAGGCCATGAAACTAGGCAGTATCCCTGGCA  196
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCT-GAGCTAGGCTAAGGCCATGAAACTAGGCAGTATCCCTGGCA  188

seq1  TCTATTATATGCATTTATGATGCTGCTCGGGCCTCCAAAGCTGCACTAGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTATATGCATTTATGATGCTGCTCGGGCCTCCAAAGCTGCACTAGA  238

seq1  TAATTCTCCACAGCAAAGTATTATCCAGCCTAAAATGCTGATGTCAAAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTCCACAGCAAAGTATTATCCAGCCTAAAATGCTGATGTCAAAAG  288

seq1  GAGAGACCCATATAGATGGAACTAATTTGGGATTCTCGCAATTTGACAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACCCATATAGATGGAACTAATTTGGGATTCTCGCAATTTGACAAT  338

seq1  TGCTTTGTTGTTTTCTTGTTTGAGAAGTCACATGGTTGATTCCTCACTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTTGTTTTCTTGTTTGAGAAGTCACATGGTTGATTCCTCACTCC  388

seq1  AGAATAGCTAGCTCTCTTATACATTAGTTTAATTTGAGATGTGCTGTTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCTAGCTCTCTTATACATTAGTTTAATTTGAGATGTGCTGTTCT  438

seq1  TCACCATTGCCTCTGTAAAGTGCTCAGACGAGAGGAGCTTCTATTACATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATTGCCTCTGTAAAGTGCTCAGACGAGAGGAGCTTCTATTACATA  488

seq1  ATGAGATAGAGTGCTCTAAATTGTTCACATAGGGAGGAGGGGAGGACCAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATAGAGTGCTCTAAATTGTTCACATAGGGAGGAGGGGAGGACCAT  538

seq1  TTTGGTGCCTCTGTCTCATGAAAATAATGGCTATTACTGTATTAAGAATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGCCTCTGTCTCATGAAAATAATGGCTATTACTGTATTAAGAATT  588

seq1  ATGTGCGTAGCATGAAAGCGTTATGTAGTATATTCTGCATAATTTACACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCGTAGCATGAAAGCGTTATGTAGTATATTCTGCATAATTTACACA  638

seq1  TCAATGTAGTACTTAGCCTCCAACATATCCTGGTTGAATTTTAATGGGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAGTACTTAGCCTCCAACATATCCTGGTTGAATTTTAATGGGAA  688

seq1  AAACTAGGGATAACTATTTTCCTCTTAAATGTATTTAAACATTTTTTGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGGGATAACTATTTTCCTCTTAAATGTATTTAAACATTTTTTGTG  738

seq1  TCTCTAACAAAATCTGTTTTAACATTTTTATGCCCTATTTGTTTTTCTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAACAAAATCTGTTTTAACATTTTTATGCCCTATTTGTTTTTCTTT  788

seq1  AAGTCTTGAATTATGGGTGTTTATAAATAGACAAAATAAGCATTACAACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTGAATTATGGGTGTTTATAAATAGACAAAATAAGCATTACAACT  838

seq1  GTCAGAAATTCTATTGAGGCTACAAGGCTACTTGGGAAAAATCTACAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAATTCTATTGAGGCTACAAGGCTACTTGGGAAAAATCTACAAAT  888

seq1  AATGTGTTAAAGTGTTCAAAAGTAAGGTAAATTTTTATAAATAATTTGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTAAAGTGTTCAAAAGTAAGGTAAATTTTTATAAATAATTTGTT  938

seq1  CATTTTTTTACTTTAGATTTTTATATTTTCAGTTCACATATTCTCAGTTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTACTTTAGATTTTTATATTTTCAGTTCACATATTCTCAGTTC  988

seq1  TTTGAGCATATACTTGAAAAGCCCCTAAAATCTATGTATAACTCCACCTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCATATACTTGAAAAGCCCCTAAAATCTATGTATAACTCCACCTA  1038

seq1  GGTATATTTTTAATTTTTTTGTTTCCTTGGTAAATGACTTGAATTGTGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATTTTTAATTTTTTTGTTTCCTTGGTAAATGACTTGAATTGTGAA  1088

seq1  CTCTGTTCTCACAACGAATTCATAGGAGAATTC  1129
      |||||||||||||||||||||||||||||||||
seq2  CTCTGTTCTCACAACGAATTCATAGGAGAATTC  1121