BAC Information

Click to search

BAC

Clone NameB6Ng01-190L11
Chromosome10 (Build37)
Map Location 75,804,883 - 75,874,101
singlet/doubletdoublet
Overlap geneDip2a, Pcnt
Upstream geneEG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b
Downstream gene2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190L11.bB6Ng01-190L11.g
ACCGA014402GA014403
length90964
definitionB6Ng01-190L11.b B6Ng01-190L11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,804,883 - 75,804,972)(75,873,155 - 75,874,101)
sequence
ttcacttagaaaaatgtgtgtattattaaactgacattattctaaaccag
cagtttttctctctgccttgaataagggggggggggggtg
gaattcatgggtgctcccagtatgccttattccaccatgtggttagagac
agaaacccttaccctttcctgggaaggctgttggatgttaatgttgattg
ttgatgctaatcttttacggctgattgtgtgagctttcacgtacgcttta
gttgaaatctttctgaacggaaatttccaaggaagcatgcagtgagaagg
acaggtaccgtctcagttgacgctcagcaccgagtaaagcagacatggcg
gtgcgtgcctatgctcccagacatggcggtgcgtgcctatgctcccagac
atggcggtgcgtgcctatgctcctagcacttaggaggtagaaacagaagg
atcagcagttcaaggtcatgttctgtttaccatcgagcttgaggccaacc
taggatagaagagatcctgtctcagaagcagaacgcagggccaggtgtgg
gagcacgtacttttagtcccagcctggtctgatagcaatgtccaggccag
ttagggctgtatagtgtgaccccatctttgaaacagaagccaccactacc
aacccaaacctacaaatccaccttttgtactttaatgcatactataatgt
tttgtatttggagagtatcactgaaaagtagaatttgttcatttcttaga
acaggtaattggaaaagatactaaatagaaacatggtgatggagaaagca
gcacatgactcttcttttcttttcttttcttttctttctttctttctttc
tttctttctttctttctttctttctttcttcttccttccttccttccttc
cttccttccttccttcctttctttctttctttctttctttctttctttct
tttcctgaggttagcagttcatacagtaggcgtttctgtgtgaagcaatg
ctgggcccggatgcctttgtcgtctgctgggggttgggggcagtgggggg
aggcggcagtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_75804883_75804972
seq2: B6Ng01-190L11.b_48_137

seq1  TTCACTTAGAAAAATGTGTGTATTATTAAACTGACATTATTCTAAACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTAGAAAAATGTGTGTATTATTAAACTGACATTATTCTAAACCAG  50

seq1  CAGTTTTTCTCTCTGCCTTGAATAAGGGGGGGGGGGGGTG  90
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTCTCTCTGCCTTGAATAAGGGGGGGGGGGGGTG  90

seq1: chr10_75873155_75874101
seq2: B6Ng01-190L11.g_65_1028 (reverse)

seq1  CCCCACTGCCGCCTCCCCCCACTGCCCCCAA-CCCCAGCAGACGAC-AAG  48
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  CCCCACTGCCGCCTCCCCCCACTGCCCCCAACCCCCAGCAGACGACAAAG  50

seq1  GCATCCGGGCCCAGCATTGCTTCACACAGAAACGCCTACTGTATGAACTG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCGGGCCCAGCATTGCTTCACACAGAAACGCCTACTGTATGAACTG  100

seq1  CTAACCTCAGGA----------------AAAGAAAGAAAGAAAGAAAGGA  132
      ||||||||||||                ||||||||||||||||||||||
seq2  CTAACCTCAGGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGA  150

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAG  182
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG-AAGAAAGAAAGAAAG  199

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAA  232
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAA  249

seq1  AGAAGAGTCATGTGCTGCTTTCTCCATCACCATGTTTCTATTTAGTATCT  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTCATGTGCTGCTTTCTCCATCACCATGTTTCTATTTAGTATCT  299

seq1  TTTCCAATTACCTGTTCTAAGAAATGAACAAATTCTACTTTTCAGTGATA  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATTACCTGTTCTAAGAAATGAACAAATTCTACTTTTCAGTGATA  349

seq1  CTCTCCAAATACAAAACATTATAGTATGCATTAAAGTACAAAAGGTGGAT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAAATACAAAACATTATAGTATGCATTAAAGTACAAAAGGTGGAT  399

seq1  TTGTAGGTTTGGGTTGGTAGTGGTGGCTTCTGTTTCAAAGATGGGGTCAC  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGTTTGGGTTGGTAGTGGTGGCTTCTGTTTCAAAGATGGGGTCAC  449

seq1  ACTATACAGCCCTAACTGGCCTGGACATTGCTATCAGACCAGGCTGGGAC  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACAGCCCTAACTGGCCTGGACATTGCTATCAGACCAGGCTGGGAC  499

seq1  TAAAAGTACGTGCTCCCACACCTGGCCCTGCGTTCTGCTTCTGAGACAGG  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTACGTGCTCCCACACCTGGCCCTGCGTTCTGCTTCTGAGACAGG  549

seq1  ATCTCTTCTATCCTAGGTTGGCCTCAAGCTCGATGGTAAACAGAACATGA  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTCTATCCTAGGTTGGCCTCAAGCTCGATGGTAAACAGAACATGA  599

seq1  CCTTGAACTGCTGATCCTTCTGTTTCTACCTCCTAAGTGCTAGGAGCATA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACTGCTGATCCTTCTGTTTCTACCTCCTAAGTGCTAGGAGCATA  649

seq1  GGCACGCACCGCCATGTCTGGGAGCATAGGCACGCACCGCCATGTCTGGG  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGCACCGCCATGTCTGGGAGCATAGGCACGCACCGCCATGTCTGGG  699

seq1  AGCATAGGCACGCACCGCCATGTCTGCTTTACTCGGTGCTGAGCGTCAAC  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGGCACGCACCGCCATGTCTGCTTTACTCGGTGCTGAGCGTCAAC  749

seq1  TGAGACGGTACCTGTCCTTCTCACTGCATGCTTCCTTGGAAATTTCCGTT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACGGTACCTGTCCTTCTCACTGCATGCTTCCTTGGAAATTTCCGTT  799

seq1  CAGAAAGATTTCAACTAAAGCGTACGTGAAAGCTCACACAATCAGCCGTA  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATTTCAACTAAAGCGTACGTGAAAGCTCACACAATCAGCCGTA  849

seq1  AAAGATTAGCATCAACAATCAACATTAACATCCAACAGCCTTCCCAGGAA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAGCATCAACAATCAACATTAACATCCAACAGCCTTCCCAGGAA  899

seq1  AGGGTAAGGGTTTCTGTCTCTAACCACATGGTGGAATAAGGCATACTGGG  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAGGGTTTCTGTCTCTAACCACATGGTGGAATAAGGCATACTGGG  949

seq1  AGCACCCATGAATTC  947
      |||||||||||||||
seq2  AGCACCCATGAATTC  964