BAC Information

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BAC

Clone NameB6Ng01-192O17
Chromosome10 (Build37)
Map Location 36,914,335 - 37,098,799
singlet/doubletdoublet
Overlap genenone
Upstream geneHs3st5, Hdac2, Marcks, LOC100040846
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192O17.bB6Ng01-192O17.g
ACCGA016032GA016033
length1,0531,063
definitionB6Ng01-192O17.b B6Ng01-192O17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,914,335 - 36,915,392)(37,097,736 - 37,098,799)
sequence
gaattctgtgatttgtcaaaaccctaaacaaaacagggctgcagttgatt
ccgacaaatggccacagctgtggaaaagtttctctgcgaaaccagcagct
cagcacaaatagccatctcatcagttttatgatcacttttccagcacgct
ctctttctccccaacactcagcgactggttccttgaggtcaggtcccttc
ttttagttgtgggcaaggtggttgtgcttttcctatagtagcttcgcttt
tctttacactcagtttcccaggttggtccatgtgtcatctcagttgacac
agaaaggtcaacaccggttgtatggccctggggagacttgttgcttagag
gttgtgactggtgccaacagtgacacacagccctgtgtcctaggcattct
gatctaggtggggccgaacgctcaggccatgaagcctggaagccaggttg
cctcacagctaaagccagcccaggtgtgctgagagttttccaaggtttgc
ctcactgtgattaagttcgctggaactgctgcaaaagtgagaagcccgga
ggagggaagcgaggtcaatgaaaactgaacctcagcgaaactcaaggaat
ccaaaccaatcccaaaccacgtttttatgagaccgttctgtgctgaaaac
tgatgaggtggatggttttctgctgttgcggcttagttaccttcctcttt
tggaggctgtatatttctctctcccagcacaatactgtgtcacaactccc
cccatacccgcccccggggccgctttcattttgaggtctgtctgtagaag
cctcattgtcatgtgcaggcatggtgatgtttgtgtttaaggcatgcatg
gacaaagagacttttggacttttggaaagcatggtatcagctcagaattt
gaacataaatgatctctctctctttttttctttctttctttttttttttg
gttttcgagacaggtttctctgtataggccctggctgctcttgaactcac
tttgtagacccagctgcctcgacctcagaaatctggcctgctttacttgg
gat

gaattcaatataattcaatcaaagactgaggaatacacatgcaagaaaac
aaggctggatagaaagttggtaaagttggcattgttactgaatgtaatgc
tttgcagtacttgagaaagggctagaaagagtgtgttgtgctggcaagat
acaacagctatttcatatgtataaccactgaagttcacatgaagatttag
cgcactagggaatctgatgtgaggatgtcaccatgtttctgggaggatat
ataggcagccaggaattcttttcattggtcaaggaagccaaggaatggaa
tgtcaccagtgtcctctgtgtcctgtgacctgctcttgtctgtgtcctgt
accatttcaacatgtcatcagggacgacagtgttcaaaggatgcatgtga
gagagagcacagccattcccactgtgcttgctcttagtcagccagcttta
aaagctttcttgtactcaaagataaaagcccttgaccttttaactcaaaa
ctgaaatgtctgatgcttagagccgatagtctagtgtgtcctctggatag
actccgttgtgggtcccaatgggagcagtgatttgaaacatcctcttggt
ttcagattcttattctccacgttttaaaggggaaacatcattgagggtga
aatttggactcataaaactctgcattaattacatactgactctgcactat
taagacaaagtcctttgaggtctggccatcagatatctttcagaggagag
ggtctgggctgttattcttactagcccctgaaagagccccatcctctctc
ctgcagccccttttgtccctagcccttctttttttcaatggttgccatgg
aatcaaccattaacatatgaaaagccatacacaacactcttccctttacc
ctttcttcccccaggaccaaatgcctgttgctaaagccttggaccttaat
attcatgtaaaggagggtggggtggtgagaacagaaataaaattctaagt
gaaacaacaagacattgttcatttacattctcttgaggcaaattgttcat
cttattttaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36914335_36915392
seq2: B6Ng01-192O17.b_44_1096

seq1  GAATTCTGTGATTTGTCAAAACCCTAAACAAAACAGGGCTGCAGTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGATTTGTCAAAACCCTAAACAAAACAGGGCTGCAGTTGATT  50

seq1  CCGACAAATGGCCACAGCTGTGGAAAAGTTTCTCTGCGAAACCAGCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACAAATGGCCACAGCTGTGGAAAAGTTTCTCTGCGAAACCAGCAGCT  100

seq1  CAGCACAAATAGCCATCTCATCAGTTTTATGATCACTTTTCCAGCACGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAAATAGCCATCTCATCAGTTTTATGATCACTTTTCCAGCACGCT  150

seq1  CTCTTTCTCCCCAACACTCAGCGACTGGTTCCTTGAGGTCAGGTCCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTCCCCAACACTCAGCGACTGGTTCCTTGAGGTCAGGTCCCTTC  200

seq1  TTTTAGTTGTGGGCAAGGTGGTTGTGCTTTTCCTATAGTAGCTTCGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTGTGGGCAAGGTGGTTGTGCTTTTCCTATAGTAGCTTCGCTTT  250

seq1  TCTTTACACTCAGTTTCCCAGGTTGGTCCATGTGTCATCTCAGTTGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACACTCAGTTTCCCAGGTTGGTCCATGTGTCATCTCAGTTGACAC  300

seq1  AGAAAGGTCAACACCGGTTGTATGGCCCTGGGGAGACTTGTTGCTTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTCAACACCGGTTGTATGGCCCTGGGGAGACTTGTTGCTTAGAG  350

seq1  GTTGTGACTGGTGCCAACAGTGACACACAGCCCTGTGTCCTAGGCATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGACTGGTGCCAACAGTGACACACAGCCCTGTGTCCTAGGCATTCT  400

seq1  GATCTAGGTGGGGCCGAACGCTCAGGCCATGAAGCCTGGAAGCCAGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGGTGGGGCCGAACGCTCAGGCCATGAAGCCTGGAAGCCAGGTTG  450

seq1  CCTCACAGCTAAAGCCAGCCCAGGTGTGCTGAGAGTTTTCCAAGGTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGCTAAAGCCAGCCCAGGTGTGCTGAGAGTTTTCCAAGGTTTGC  500

seq1  CTCACTGTGATTAAGTTCGCTGGAACTGCTGCAAAAGTGAGAAGCCCGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTGATTAAGTTCGCTGGAACTGCTGCAAAAGTGAGAAGCCCGGA  550

seq1  GGAGGGAAGCGAGGTCAATGAAAACTGAACCTCAGCGAAACTCAAGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAGCGAGGTCAATGAAAACTGAACCTCAGCGAAACTCAAGGAAT  600

seq1  CCAAACCAATCCCAAACCACGTTTTTATGAGACCGTTCTGTGCTGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAATCCCAAACCACGTTTTTATGAGACCGTTCTGTGCTGAAAAC  650

seq1  TGATGAGGTGGATGGTTTTCTGCTGTTGCGGCTTAGTTACCTTCCTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGTGGATGGTTTTCTGCTGTTGCGGCTTAGTTACCTTCCTCTTT  700

seq1  TGGAGGCTGTATATTTCTCTCTCCCAGCACAATACTGTGTCACAACTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCTGTATATTTCTCTCTCCCAGCACAATACTGTGTCACAACTCCC  750

seq1  CCCATACCCGCCCCCGGGGCCGCTTTCATTTTGAGGTCTGTCTGTAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCCGCCCCCGGGGCCGCTTTCATTTTGAGGTCTGTCTGTAGAAG  800

seq1  CCTCATTGTCATGTGCAGGCATGGTGATGTTTGTGTTTAAGGCATGCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGTCATGTGCAGGCATGGTGATGTTTGTGTTTAAGGCATGCATG  850

seq1  GACAAAGAGACTTTTGGACTTTTGGAAAGCATGGTATCAGCTCAGAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAGACTTTTGGACTTTTGGAAAGCATGGTATCAGCTCAGAATTT  900

seq1  GAACATAAATGATCTCTCTCTCTTTTTTTTTCTTTTCTTTTCTTTTTTTT  950
      ||||||||||||||||||||||  |||||||||||   ||||||||||||
seq2  GAACATAAATGATCTCTCTCTC--TTTTTTTCTTT--CTTTCTTTTTTTT  946

seq1  TTTGGTTTTTCGAGACAGGGTTTCTCTGTATA-GCCCTGGCTGCTCTGGA  999
      ||||| ||||||||||| |||||||||||||| |||||||||||||| ||
seq2  TTTGG-TTTTCGAGACA-GGTTTCTCTGTATAGGCCCTGGCTGCTCTTGA  994

seq1  ACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC-GGCCTGCCT  1048
      ||||||||||||||||  ||| ||||||| |||||||||| |||||| ||
seq2  ACTCACTTTGTAGACCCAGCT-GCCTCGACCTCAGAAATCTGGCCTG-CT  1042

seq1  TTAC-TGGGAT  1058
      |||| ||||||
seq2  TTACTTGGGAT  1053


seq1: chr10_37097736_37098799
seq2: B6Ng01-192O17.g_67_1129 (reverse)

seq1  TCTTTAAAATAGAATGGACCATTTTGCCTCCAGAGGATGTAAATTGAAC-  49
      |||||||||||  || || || |||||||| |||| ||||||| ||||| 
seq2  TCTTTAAAATAAGAT-GAACAATTTGCCTCAAGAGAATGTAAA-TGAACA  48

seq1  ATGTCTTTGTGTTTTCACTTAGAATTTTATTTCTGTTCTCA-CACCCCAC  98
      ||||| ||||  ||||||||||||||||||||||||||||| ||||||||
seq2  ATGTC-TTGTTGTTTCACTTAGAATTTTATTTCTGTTCTCACCACCCCAC  97

seq1  CCTCCTTTACATGAATATTAAGGTCCAAGGCTTTAGCAACAGGCATTTGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTACATGAATATTAAGGTCCAAGGCTTTAGCAACAGGCATTTGG  147

seq1  TCCTGGGGGAAGAAAGGGTAAAGGGAAGAGTGTTGTGTATGGCTTTTCAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGGAAGAAAGGGTAAAGGGAAGAGTGTTGTGTATGGCTTTTCAT  197

seq1  ATGTTAATGGTTGATTCCATGGCAACCATTGAAAAAAAGAAGGGCTAGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATGGTTGATTCCATGGCAACCATTGAAAAAAAGAAGGGCTAGGG  247

seq1  ACAAAAGGGGCTGCAGGAGAGAGGATGGGGCTCTTTCAGGGGCTAGTAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGGGGCTGCAGGAGAGAGGATGGGGCTCTTTCAGGGGCTAGTAAG  297

seq1  AATAACAGCCCAGACCCTCTCCTCTGAAAGATATCTGATGGCCAGACCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGCCCAGACCCTCTCCTCTGAAAGATATCTGATGGCCAGACCTC  347

seq1  AAAGGACTTTGTCTTAATAGTGCAGAGTCAGTATGTAATTAATGCAGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTTTGTCTTAATAGTGCAGAGTCAGTATGTAATTAATGCAGAGT  397

seq1  TTTATGAGTCCAAATTTCACCCTCAATGATGTTTCCCCTTTAAAACGTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGTCCAAATTTCACCCTCAATGATGTTTCCCCTTTAAAACGTGG  447

seq1  AGAATAAGAATCTGAAACCAAGAGGATGTTTCAAATCACTGCTCCCATTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAGAATCTGAAACCAAGAGGATGTTTCAAATCACTGCTCCCATTG  497

seq1  GGACCCACAACGGAGTCTATCCAGAGGACACACTAGACTATCGGCTCTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCACAACGGAGTCTATCCAGAGGACACACTAGACTATCGGCTCTAA  547

seq1  GCATCAGACATTTCAGTTTTGAGTTAAAAGGTCAAGGGCTTTTATCTTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGACATTTCAGTTTTGAGTTAAAAGGTCAAGGGCTTTTATCTTTG  597

seq1  AGTACAAGAAAGCTTTTAAAGCTGGCTGACTAAGAGCAAGCACAGTGGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAGAAAGCTTTTAAAGCTGGCTGACTAAGAGCAAGCACAGTGGGA  647

seq1  ATGGCTGTGCTCTCTCTCACATGCATCCTTTGAACACTGTCGTCCCTGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGTGCTCTCTCTCACATGCATCCTTTGAACACTGTCGTCCCTGAT  697

seq1  GACATGTTGAAATGGTACAGGACACAGACAAGAGCAGGTCACAGGACACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTGAAATGGTACAGGACACAGACAAGAGCAGGTCACAGGACACA  747

seq1  GAGGACACTGGTGACATTCCATTCCTTGGCTTCCTTGACCAATGAAAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACTGGTGACATTCCATTCCTTGGCTTCCTTGACCAATGAAAAGA  797

seq1  ATTCCTGGCTGCCTATATATCCTCCCAGAAACATGGTGACATCCTCACAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGGCTGCCTATATATCCTCCCAGAAACATGGTGACATCCTCACAT  847

seq1  CAGATTCCCTAGTGCGCTAAATCTTCATGTGAACTTCAGTGGTTATACAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCCCTAGTGCGCTAAATCTTCATGTGAACTTCAGTGGTTATACAT  897

seq1  ATGAAATAGCTGTTGTATCTTGCCAGCACAACACACTCTTTCTAGCCCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAGCTGTTGTATCTTGCCAGCACAACACACTCTTTCTAGCCCTT  947

seq1  TCTCAAGTACTGCAAAGCATTACATTCAGTAACAATGCCAACTTTACCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGTACTGCAAAGCATTACATTCAGTAACAATGCCAACTTTACCAA  997

seq1  CTTTCTATCCAGCCTTGTTTTCTTGCATGTGTATTCCTCAGTCTTTGATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATCCAGCCTTGTTTTCTTGCATGTGTATTCCTCAGTCTTTGATT  1047

seq1  GAATTATATTGAATTC  1064
      ||||||||||||||||
seq2  GAATTATATTGAATTC  1063


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