BAC Information

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BAC

Clone NameB6Ng01-194D02
Chromosome10 (Build37)
Map Location 64,591,511 - 64,735,127
singlet/doubletdoublet
Overlap genenone
Upstream geneCtnna3
Downstream geneLOC665206, LOC216036, 1700023F02Rik, 4930407I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194D02.bB6Ng01-194D02.g
ACCGA016956GA016957
length541464
definitionB6Ng01-194D02.b B6Ng01-194D02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,591,511 - 64,592,057)(64,734,658 - 64,735,127)
sequence
actagaaatatatgtaggaaaaaataacgacagcaaatcaaggttcagat
caatatataaaaaccaaggtccaggcgtgatagcaaagtagtcttctttc
agcactaggactgttaaggcagggcggtcagaagttaaagggaggtctat
tacacaaaaacgtaaggccaggataggccttactctacctaagaaaaaaa
attaactaataagtaaaactcagacatatcttatcgatattgtagattta
agccatctaaggtagactgcggcattctgcaactggggctaaagctgcat
ttctcttggcaactcttctaactaactctttactatagtgtggccaaaag
ctgttggtttctggtaatttgattcccactgatagcaccagggaatttaa
aaagaaaggcttagtttctctctggctcaggagcccactgctctccaagt
gaaaggcttggacagctactctgaaataatatgccccagtacaggttaat
gctaggtccgggaggaaatgggagtgggtaggttgaggagc

ttaatgtgtacatatttttaaaactaaaatatatagatacataccttaaa
tggaaataatgcctctgtttttaaatactaagaaatgttataaacaagaa
ttctggtaatagagctaaatttatagtcccagatactaaatgtagaaatt
atttttgatttatataatatatatacacacacaaatgtttaatttctatg
ttggttgatggcatgggattggagtgttgaaatagcatatatcattttaa
tgaatcaatgaaacaaaagtggtataatagaagagctttatttacaagcc
agaactcaagacaagttaaaccttaatccaatgcatgcatatgtatcaaa
agatggcctagtcggccatcactgcaaagagaggcccattggacacgcaa
actttatatgccccagtacaggggaatgccagggccaaaaagggggagtg
ggtgggtaggggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_64591511_64592057
seq2: B6Ng01-194D02.b_45_591

seq1  GAATTCACTAGAAATATATGTAGGAAAAAATAACGACAGCAAATCAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGAAATATATGTAGGAAAAAATAACGACAGCAAATCAAGGT  50

seq1  TCAGATCAATATATAAAAACCAAGGTCCAGGCGTGATAGCAAAGTAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCAATATATAAAAACCAAGGTCCAGGCGTGATAGCAAAGTAGTCT  100

seq1  TCTTTCAGCACTAGGACTGTTAAGGCAGGGCGGTCAGAAGTTAAAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGCACTAGGACTGTTAAGGCAGGGCGGTCAGAAGTTAAAGGGAG  150

seq1  GTCTATTACACAAAAACGTAAGGCCAGGATAGGCCTTACTCTACCTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTACACAAAAACGTAAGGCCAGGATAGGCCTTACTCTACCTAAGA  200

seq1  AAAAAAATTAACTAATAAGTAAAACTCAGACATATCTTATCGATATTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTAACTAATAAGTAAAACTCAGACATATCTTATCGATATTGTA  250

seq1  GATTTAAGCCATCTAAGGTAGACTGCGGCATTCTGCAACTGGGGCTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAGCCATCTAAGGTAGACTGCGGCATTCTGCAACTGGGGCTAAAG  300

seq1  CTGCATTTCTCTTGGCAACTCTTCTAACTAACTCTTTACTATAGTGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTCTCTTGGCAACTCTTCTAACTAACTCTTTACTATAGTGTGGC  350

seq1  CAAAAGCTGTTGGTTTCTGGTAATTTGATTCCCACTGATAGCACCAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTGTTGGTTTCTGGTAATTTGATTCCCACTGATAGCACCAGGGA  400

seq1  ATTTAAAAAGAAAGGCTTAGTTTCTCTCTGGCTCAGGAGCCCACTGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAGAAAGGCTTAGTTTCTCTCTGGCTCAGGAGCCCACTGCTCT  450

seq1  CCAAGTGAAAGGCTTGGACAGCTACTCTGAAATAATATGCCCCAGTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGAAAGGCTTGGACAGCTACTCTGAAATAATATGCCCCAGTACAG  500

seq1  GTTAATGCTAGGTCCGGGAGGAAATGGGAGTGGGTAGGTTGAGGAGC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGCTAGGTCCGGGAGGAAATGGGAGTGGGTAGGTTGAGGAGC  547


seq1: chr10_64734658_64735127
seq2: B6Ng01-194D02.g_64_533 (reverse)

seq1  ATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCATTCCCCTGTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCATTCCCCTGTACT  50

seq1  GGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTGCAGTGATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTGCAGTGATGGC  100

seq1  CGACTAGGCCATCTTTTGATACATATGCATGCATTGGATTAAGGTTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTAGGCCATCTTTTGATACATATGCATGCATTGGATTAAGGTTTAAC  150

seq1  TTGTCTTGAGTTCTGGCTTGTAAATAAAGCTCTTCTATTATACCACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTGAGTTCTGGCTTGTAAATAAAGCTCTTCTATTATACCACTTTT  200

seq1  GTTTCATTGATTCATTAAAATGATATATGCTATTTCAACACTCCAATCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTGATTCATTAAAATGATATATGCTATTTCAACACTCCAATCCC  250

seq1  ATGCCATCAACCAACATAGAAATTAAACATTTGTGTGTGTATATATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATCAACCAACATAGAAATTAAACATTTGTGTGTGTATATATATTA  300

seq1  TATAAATCAAAAATAATTTCTACATTTAGTATCTGGGACTATAAATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATCAAAAATAATTTCTACATTTAGTATCTGGGACTATAAATTTAG  350

seq1  CTCTATTACCAGAATTCTTGTTTATAACATTTCTTAGTATTTAAAAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTACCAGAATTCTTGTTTATAACATTTCTTAGTATTTAAAAACAG  400

seq1  AGGCATTATTTCCATTTAAGGTATGTATCTATATATTTTAGTTTTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTATTTCCATTTAAGGTATGTATCTATATATTTTAGTTTTAAAAA  450

seq1  TATGTACACATTAAGAATTC  470
      ||||||||||||||||||||
seq2  TATGTACACATTAAGAATTC  470


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