BAC Information

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BAC

Clone NameB6Ng01-194H06
Chromosome10 (Build37)
Map Location 111,720,856 - 111,877,833
singlet/doubletdoublet
Overlap geneKcnc2
Upstream geneOsbpl8, Bbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2
Downstream geneLOC100042639, 4921506J03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194H06.bB6Ng01-194H06.g
ACCGA017142GA017143
length233301
definitionB6Ng01-194H06.b B6Ng01-194H06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,877,601 - 111,877,833)(111,720,856 - 111,721,156)
sequence
gaattcttttacgttcatactctccagatcaggaagtggctagagtttca
ccatctttaagagtttcactgtgatttcccagatactgtgttcagacatt
ttttttttctcttttgtggtgatctgaatgaaaatggcctccacagcctc
agggggaggggcactattaggaagggtgggctttgttgaagaaggtaagg
cctggttggaggaagtgttggtggtggaggtgg

ccaatgcatgtacatccttccttgtttaggaaatctttattccttgtctt
ttgttccaaactgagttcaccttccataacccttcagatgctgccacttc
tcaaactctcaaatactctgtttccagctttactatgaaaatacagcttg
attcaagtgacaggctcctcttctctttctcttccctttcccttccccct
tcccccttcccccttcctcttcccctttcccccttcttccttcccccttc
ttccttctcccttccttccaccttctttcttccccattccccttccccat
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_111877601_111877833
seq2: B6Ng01-194H06.b_39_271 (reverse)

seq1  CCACCTCCACCACCAACACTTCCTCCAACCAGGCCTTACCTTCTTCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCACCACCAACACTTCCTCCAACCAGGCCTTACCTTCTTCAACA  50

seq1  AAGCCCACCCTTCCTAATAGTGCCCCTCCCCCTGAGGCTGTGGAGGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCACCCTTCCTAATAGTGCCCCTCCCCCTGAGGCTGTGGAGGCCAT  100

seq1  TTTCATTCAGATCACCACAAAAGAGAAAAAAAAAATGTCTGAACACAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCAGATCACCACAAAAGAGAAAAAAAAAATGTCTGAACACAGTA  150

seq1  TCTGGGAAATCACAGTGAAACTCTTAAAGATGGTGAAACTCTAGCCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAAATCACAGTGAAACTCTTAAAGATGGTGAAACTCTAGCCACTT  200

seq1  CCTGATCTGGAGAGTATGAACGTAAAAGAATTC  233
      |||||||||||||||||||||||||||||||||
seq2  CCTGATCTGGAGAGTATGAACGTAAAAGAATTC  233


seq1: chr10_111720856_111721156
seq2: B6Ng01-194H06.g_71_371

seq1  CCAATGCATGTACATCCTTCCTTGTTTAGGAAATCTTTATTCCTTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCATGTACATCCTTCCTTGTTTAGGAAATCTTTATTCCTTGTCTT  50

seq1  TTGTTCCAAACTGAGTTCACCTTCCATAACCCTTCAGATGCTGCCACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCAAACTGAGTTCACCTTCCATAACCCTTCAGATGCTGCCACTTC  100

seq1  TCAAACTCTCAAATACTCTGTTTCCAGCTTTACTATGAAAATACAGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCTCAAATACTCTGTTTCCAGCTTTACTATGAAAATACAGCTTG  150

seq1  ATTCAAGTGACAGGCTCCTCTTCTCTTTCTCTTCCCTTTCCCTTCCCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTGACAGGCTCCTCTTCTCTTTCTCTTCCCTTTCCCTTCCCCCT  200

seq1  TCCCCCTTCCCCCTTCCTCTTCCCCTTTCCCCCTTCTTCCTTCCCCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTTCCCCCTTCCTCTTCCCCTTTCCCCCTTCTTCCTTCCCCCTTC  250

seq1  TTCCTTCTCCCTTCCTTCCCCCTTCTTTCTTCCCCCTTCCCCTTCCCCAT  300
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  TTCCTTCTCCCTTCCTTCCACCTTCTTTCTTCCCCATTCCCCTTCCCCAT  300

seq1  T  301
      |
seq2  T  301


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