BAC Information

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BAC

Clone NameB6Ng01-194H19
Chromosome10 (Build37)
Map Location 70,569,044 - 70,728,188
singlet/doubletdoublet
Overlap geneBicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1
Upstream geneCcdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429
Downstream geneLOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194H19.bB6Ng01-194H19.g
ACCGA017168GA017169
length5581,081
definitionB6Ng01-194H19.b B6Ng01-194H19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,727,625 - 70,728,188)(70,569,044 - 70,570,118)
sequence
caggctaggtacggttacatattgatattttgtcttaaaaaaaaaaaggt
ttggatacattaatgtttttagaagactccacaagtcgttttagaagtgt
ttcctaaatcccaaattagaaaaaccaatagaaggcagtccccgcaattg
gctgtaactgagaacagctcctctcccacttttccacactgttgaaactc
ttgtctcctactccaagagaattggcaagaactccttccatcttgtctca
acatttattgcaatggctgctgtgagctggggagaccctgctgcacactt
gacctgtattctgtcctgcggttgtcatggaaactgtagatgaaatagta
attctgcattgtacaaaagaaaatcgaaacctggaaagcaaaagtcattc
cccaggtgaggggtggtgcccgggcttcaatgttaaagccttgcttttag
acacaggggagatctcggaagactggtgtctcccattggttaacagtaca
tggagcaacacaggagctgagttagttgtacaggggcagggatggggtgg
ggtgggga
gaattctccttggtcccactgaggtacccctgttcttaactgtctgtgtc
taagagaactttagggaaagcgtagatcagagagcgaggctcactcttgt
ggatgtacacactgggtttggcaatgcagcagggagaccagtgctcatcc
tggttcctggaaacagaattcatctagcttcctaatgagagaaacagaag
ttacaggtaaagtagggtcactgattgcatcggattctctggacggactc
catacactgcaaagggtcctggaagagaaagtgctatgcaggtttctcag
tcagtccagtcttcatcacattcacatgaagagtatgatcccacccccat
gtaaagcctgagggtgaccgtgctcagcttttacatgggtaagcaaaccg
ctggggtgtggagagaggtggactcctgaaggtcaccggctggccagcca
gttcagacaaatcagctccaggtcctgcaagagcccctgtctcaaaaatt
aaggtggagagcaacagaagatacctgatgttgatacctggtctccacat
ggacacacacgcacacacacacacacacacacacacacacacacagaggc
acacaccaacaccacatgcagggggaggagcagggaggaacaggaggagg
aggaacaggaccaggaggaggagcaggaggaagaggaggagcagcatgaa
gaggaggagcagcagaaggaggaggaacaacaggaggaggagccccagca
ggaggaggagcaccagtaggaggaggagggctccagcagcaaggaggaga
atgtggccgccagttgccgatgtggcagctgtggtagtgacagcatcacc
acaatgatgacagccatcgcagtagaagagtcagagactcagaaatactt
caagttctggtttacagatagaggaaggaccatgagcctggagaagggcc
cctcggaggcaggaaacggtaggatggtcagaattcaatacagagcctcc
tgggagactcccagctcttgtcaaacatcgtcctggacttcagccagtgg
aggtttcactacaaacctccaacctccaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_70727625_70728188
seq2: B6Ng01-194H19.b_48_611 (reverse)

seq1  TCCCCACCCCACCCCATCCCTGCCCCTGTACAACTAACTCAGCTCCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCCCACCCCATCCCTGCCCCTGTACAACTAACTCAGCTCCTGTG  50

seq1  TTGCTCCATGTACTGTTAACCAATGGGAGACACCAGTCTTCCGAGATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCATGTACTGTTAACCAATGGGAGACACCAGTCTTCCGAGATCTC  100

seq1  CCCTGTGTCTAAAAGCAAGGCTTTAACATTGAAGCCCGGGCACCACCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTCTAAAAGCAAGGCTTTAACATTGAAGCCCGGGCACCACCCCT  150

seq1  CACCTGGGGAATGACTTTTGCTTTCCAGGTTTCGATTTTCTTTTGTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGGAATGACTTTTGCTTTCCAGGTTTCGATTTTCTTTTGTACAA  200

seq1  TGCAGAATTACTATTTCATCTACAGTTTCCATGACAACCGCAGGACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATTACTATTTCATCTACAGTTTCCATGACAACCGCAGGACAGAA  250

seq1  TACAGGTCAAGTGTGCAGCAGGGTCTCCCCAGCTCACAGCAGCCATTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTCAAGTGTGCAGCAGGGTCTCCCCAGCTCACAGCAGCCATTGCA  300

seq1  ATAAATGTTGAGACAAGATGGAAGGAGTTCTTGCCAATTCTCTTGGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTTGAGACAAGATGGAAGGAGTTCTTGCCAATTCTCTTGGAGTA  350

seq1  GGAGACAAGAGTTTCAACAGTGTGGAAAAGTGGGAGAGGAGCTGTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAAGAGTTTCAACAGTGTGGAAAAGTGGGAGAGGAGCTGTTCTCA  400

seq1  GTTACAGCCAATTGCGGGGACTGCCTTCTATTGGTTTTTCTAATTTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGCCAATTGCGGGGACTGCCTTCTATTGGTTTTTCTAATTTGGGA  450

seq1  TTTAGGAAACACTTCTAAAACGACTTGTGGAGTCTTCTAAAAACATTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAAACACTTCTAAAACGACTTGTGGAGTCTTCTAAAAACATTAAT  500

seq1  GTATCCAAACCTTTTTTTTTTTAAGACAAAATATCAATATGTAACCGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCAAACCTTTTTTTTTTTAAGACAAAATATCAATATGTAACCGTAC  550

seq1  CTAGCCTGGAATTC  564
      ||||||||||||||
seq2  CTAGCCTGGAATTC  564

seq1: chr10_70569044_70570118
seq2: B6Ng01-194H19.g_65_1145

seq1  GAATTCTCCTTGGTCCCACTGAGGTACCCCTGTTCTTAACTGTCTGTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTGGTCCCACTGAGGTACCCCTGTTCTTAACTGTCTGTGTC  50

seq1  TAAGAGAACTTTAGGGAAAGCGTAGATCAGAGAGCGAGGCTCACTCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAACTTTAGGGAAAGCGTAGATCAGAGAGCGAGGCTCACTCTTGT  100

seq1  GGATGTACACACTGGGTTTGGCAATGCAGCAGGGAGACCAGTGCTCATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTACACACTGGGTTTGGCAATGCAGCAGGGAGACCAGTGCTCATCC  150

seq1  TGGTTCCTGGAAACAGAATTCATCTAGCTTCCTAATGAGAGAAACAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTGGAAACAGAATTCATCTAGCTTCCTAATGAGAGAAACAGAAG  200

seq1  TTACAGGTAAAGTAGGGTCACTGATTGCATCGGATTCTCTGGACGGACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGTAAAGTAGGGTCACTGATTGCATCGGATTCTCTGGACGGACTC  250

seq1  CATACACTGCAAAGGGTCCTGGAAGAGAAAGTGCTATGCAGGTTTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACTGCAAAGGGTCCTGGAAGAGAAAGTGCTATGCAGGTTTCTCAG  300

seq1  TCAGTCCAGTCTTCATCACATTCACATGAAGAGTATGATCCCACCCCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCAGTCTTCATCACATTCACATGAAGAGTATGATCCCACCCCCAT  350

seq1  GTAAAGCCTGAGGGTGACCGTGCTCAGCTTTTACATGGGTAAGCAAACCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCCTGAGGGTGACCGTGCTCAGCTTTTACATGGGTAAGCAAACCG  400

seq1  CTGGGGTGTGGAGAGAGGTGGACTCCTGAAGGTCACCGGCTGGCCAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGTGGAGAGAGGTGGACTCCTGAAGGTCACCGGCTGGCCAGCCA  450

seq1  GTTCAGACAAATCAGCTCCAGGTCCTGCAAGAGCCCCTGTCTCAAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGACAAATCAGCTCCAGGTCCTGCAAGAGCCCCTGTCTCAAAAATT  500

seq1  AAGGTGGAGAGCAACAGAAGATACCTGATGTTGATACCTGGTCTCCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGAGAGCAACAGAAGATACCTGATGTTGATACCTGGTCTCCACAT  550

seq1  GGACACACACGCACACACACACACACACACACACACACACACACAGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACACACGCACACACACACACACACACACACACACACACACAGAGGC  600

seq1  ACACACCAACACCACATGCAGGGGGAGGAGCAGGGAGGAACAGGAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCAACACCACATGCAGGGGGAGGAGCAGGGAGGAACAGGAGGAGG  650

seq1  AGGAACAGGACCAGGAGGAGGAGCAGGAGGAAGAGGAGGAGCAGCAGGAA  700
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGAACAGGACCAGGAGGAGGAGCAGGAGGAAGAGGAGGAGCAGCATGAA  700

seq1  GAGGAGGAGCAGCAGAAGGAGGAGGAACAACAGGAGGAGGAGCCCCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAGCAGCAGAAGGAGGAGGAACAACAGGAGGAGGAGCCCCAGCA  750

seq1  GGAGGAGGAGCACCAGTAGGAGGAGGAGGGGCTCCAGCAGC-AGGAGGAG  799
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  GGAGGAGGAGCACCAGTAGGAGGAGGA-GGGCTCCAGCAGCAAGGAGGAG  799

seq1  AAGGTGG-CGGCAG-TGGCGATGTGGCAGCTGTGGTAGTGACAGCATCAA  847
      || |||| || ||| || |||||||||||||||||||||||||||||| |
seq2  AATGTGGCCGCCAGTTGCCGATGTGGCAGCTGTGGTAGTGACAGCATC-A  848

seq1  CCACAATGATGACAGCCATCGCAGTAGAAGAGTCAGAGACTCAGAAATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGATGACAGCCATCGCAGTAGAAGAGTCAGAGACTCAGAAATAC  898

seq1  -TCAAGTTCTGGTTTACAGATAGAGGAAGGGACCATGAGCCTGGAGAAGG  946
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCAAGTTCTGGTTTACAGATAGAGGAA-GGACCATGAGCCTGGAGAAGG  947

seq1  GCCCCTCGGAGGCAGGAAACGGTA-GATGGGCAG-ATTCCATACCAGAGC  994
      |||||||||||||||||||||||| ||||| ||| |||| ||| ||||||
seq2  GCCCCTCGGAGGCAGGAAACGGTAGGATGGTCAGAATTCAATA-CAGAGC  996

seq1  CTCCTGGAGAACTCCCAGCTCT--GCCAACATCGTCCT-GACTTCAGCCC  1041
      |||||||   ||||||||||||   | ||||||||||| |||||||| ||
seq2  CTCCTGGGAGACTCCCAGCTCTTGTCAAACATCGTCCTGGACTTCAG-CC  1045

seq1  AGT-GAGG-TTCACTACAAACCTCCAACCTCCAAGG  1075
      ||| |||| ||||||||||||||||||||||||| |
seq2  AGTGGAGGTTTCACTACAAACCTCCAACCTCCAACG  1081