BAC Information

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BAC

Clone NameB6Ng01-198E17
Chromosome10 (Build37)
Map Location 52,156,405 - 52,157,517
singlet/doubletsinglet
Overlap geneD10Ertd438e
Upstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1, Gopc, LOC625811, EG668294, Nepn
Downstream geneEG629689, Zfa, Slc35f1, Pln
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198E17.bB6Ng01-198E17.g
ACCGA019927GA019928
length5321,132
definitionB6Ng01-198E17.b B6Ng01-198E17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atattgcatccttatatcttacatggtatatatatatgaactaaaaaggg
gcccaggggaaagagggggcagggaggatagcccacatccggtcagagtt
ccacctatgctctggacaggcagatgcgggagggctgccttacgctttcc
actcagcctggggtgggcatccaagcctctgacccactccacgagggggg
ggggtagacaaggggcagccctcgaaaccaaaaggggccccagggttaca
ccatgtagccctggggttatgggagaaaaggcatagggaagagaggttcc
cacacaggtgagagtgagcgcagcgaactttagctggagcacaggaaggc
cttccatccggagattagaaacagctccttaggagaaagcctatcccatc
ctccaagcacagcaggcctggatgagcacagacagtctatggttttagag
ctttattatagaaaggctgggggaaagagagaaggtagaaaagagagaga
aagaagaactgctagagagtgagaggagagag
gaattcacttgtcagagcagtgctgttctctagaacacagaagaccaagt
tcaattatgctcccagacttcggtaatacaggcctcatcctactcaatca
ccatgacatcatcactgagatttactgggaggagaaaatcccaggtgcca
ctcaagaggagcaggttccttctgaggacaagagctgccttggtaacttc
tcgcaaatgtttatttttaagtaaaaagcgaatggaaacaggttttaagt
gatttgggtactatccagcatcttcacacgaagaaggaaatcaaagttgt
cctttaagaggttccatctttaagatgattgctcattctctttgttggtt
ttgagtgcctaattcaatatttaaatgttttctattctgtacatcaaata
gtgtaagttttttttcgtcaaatgatctctctagcccagaatagacacca
gactaatcctcccaagtcccactgtttactctaatgaagaaatgaaatgg
acggaaatctgaggacgttccctttgctcggcagagaagcaaacgtgaac
ctctgaatgtcactcaaaatgagaatacttccccttagtaagtcaatata
ttcttcttcaaaattaaagtttggtcactaaaaaagactgcacaaaaatt
atccccacccaccacagacaactaaatcagttctactcattcctctactc
cccagacaaacagggaagtagcaggaaccgaagcctctctatctggaatc
tcagttcctaagacacacactgctgttacttgcttgaactccagtctata
tactccattctccaatgtgcccccatttataaatttatttccacacacac
acacacacacacacacacacacacacacacacactcattcgctctcaagt
aagacacttttttgtgttgttgaaaaattatgaaggaatatgaactaagt
gtgtacagggtttttataaggtacttgtaaaccatcagtgtccacttggg
tccttttttcctccaaaagcctgaagtcaaattatgccaagtagggaacc
aattacctttccccagtccgctgttccgcaagcctggcaataactgccga
agggccgagaaaagagtccctcatagcctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_52156405_52157517
seq2: B6Ng01-198E17.g_67_1198 (reverse)

seq1  ATCA-GCTATGA-GGACT-TCTTCTCCGCCCTTCGGCAGT--ATGC--AG  43
      |||| ||||||| ||||| | ||||| |||||||||||||   |||   |
seq2  ATCAGGCTATGAGGGACTCTTTTCTCGGCCCTTCGGCAGTTATTGCCAGG  50

seq1  CTTGC-GAACAGC-GACTGGG--AAAGTAAT--GGTCCCTACTT-GCATA  86
      ||||| ||||||| |||||||  || |||||  | ||||||||| |||||
seq2  CTTGCGGAACAGCGGACTGGGGAAAGGTAATTGGTTCCCTACTTGGCATA  100

seq1  ATTTGACTTCAGGCTTTTGGAG--AAAAAGGACCCAAGT-GACACTGAT-  132
      ||||||||||||||||||||||  ||||||||||||||| ||||||||| 
seq2  ATTTGACTTCAGGCTTTTGGAGGAAAAAAGGACCCAAGTGGACACTGATG  150

seq1  GTTTACAAAGTACC-TAT-AAAACCCTGTACACACCTAGTTCATATTCC-  179
      |||||| ||||||| ||| |||||||||||||||| ||||||||||||| 
seq2  GTTTAC-AAGTACCTTATAAAAACCCTGTACACACTTAGTTCATATTCCT  199

seq1  TCATAATTTATCAACAAACACAAAAAAGTGTCTTACTTGAGAGCGAATGA  229
      ||||||||| ||||| ||||||||||||||||||||||||||||||||||
seq2  TCATAATTTTTCAAC-AACACAAAAAAGTGTCTTACTTGAGAGCGAATGA  248

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAATAA  279
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAATAA  298

seq1  ATTTATAAATGGGGGCACATTGGAGAATGGAGTATATAGACTGGAGTTCA  329
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAATGGGGGCACATTGGAGAATGGAGTATATAGACTGGAGTTCA  348

seq1  AGCAAGTAACAGCAGTGTGTGTCTTAGGAACTGAGATTCCAGATAGAGAG  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTAACAGCAGTGTGTGTCTTAGGAACTGAGATTCCAGATAGAGAG  398

seq1  GCTTCGGTTCCTGCTACTTCCCTGTTTGTCTGGGGAGTAGAGGAATGAGT  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGGTTCCTGCTACTTCCCTGTTTGTCTGGGGAGTAGAGGAATGAGT  448

seq1  AGAACTGATTTAGTTGTCTGTGGTGGGTGGGGATAATTTTTGTGCAGTCT  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGATTTAGTTGTCTGTGGTGGGTGGGGATAATTTTTGTGCAGTCT  498

seq1  TTTTTAGTGACCAAACTTTAATTTTGAAGAAGAATATATTGACTTACTAA  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTGACCAAACTTTAATTTTGAAGAAGAATATATTGACTTACTAA  548

seq1  GGGGAAGTATTCTCATTTTGAGTGACATTCAGAGGTTCACGTTTGCTTCT  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGTATTCTCATTTTGAGTGACATTCAGAGGTTCACGTTTGCTTCT  598

seq1  CTGCCGAGCAAAGGGAACGTCCTCAGATTTCCGTCCATTTCATTTCTTCA  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGAGCAAAGGGAACGTCCTCAGATTTCCGTCCATTTCATTTCTTCA  648

seq1  TTAGAGTAAACAGTGGGACTTGGGAGGATTAGTCTGGTGTCTATTCTGGG  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTAAACAGTGGGACTTGGGAGGATTAGTCTGGTGTCTATTCTGGG  698

seq1  CTAGAGAGATCATTTGACGAAAAAAAACTTACACTATTTGATGTACAGAA  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAGATCATTTGACGAAAAAAAACTTACACTATTTGATGTACAGAA  748

seq1  TAGAAAACATTTAAATATTGAATTAGGCACTCAAAACCAACAAAGAGAAT  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACATTTAAATATTGAATTAGGCACTCAAAACCAACAAAGAGAAT  798

seq1  GAGCAATCATCTTAAAGATGGAACCTCTTAAAGGACAACTTTGATTTCCT  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATCATCTTAAAGATGGAACCTCTTAAAGGACAACTTTGATTTCCT  848

seq1  TCTTCGTGTGAAGATGCTGGATAGTACCCAAATCACTTAAAACCTGTTTC  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGTGTGAAGATGCTGGATAGTACCCAAATCACTTAAAACCTGTTTC  898

seq1  CATTCGCTTTTTACTTAAAAATAAACATTTGCGAGAAGTTACCAAGGCAG  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGCTTTTTACTTAAAAATAAACATTTGCGAGAAGTTACCAAGGCAG  948

seq1  CTCTTGTCCTCAGAAGGAACCTGCTCCTCTTGAGTGGCACCTGGGATTTT  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCCTCAGAAGGAACCTGCTCCTCTTGAGTGGCACCTGGGATTTT  998

seq1  CTCCTCCCAGTAAATCTCAGTGATGATGTCATGGTGATTGAGTAGGATGA  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCAGTAAATCTCAGTGATGATGTCATGGTGATTGAGTAGGATGA  1048

seq1  GGCCTGTATTACCGAAGTCTGGGAGCATAATTGAACTTGGTCTTCTGTGT  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTATTACCGAAGTCTGGGAGCATAATTGAACTTGGTCTTCTGTGT  1098

seq1  TCTAGAGAACAGCACTGCTCTGACAAGTGAATTC  1113
      ||||||||||||||||||||||||||||||||||
seq2  TCTAGAGAACAGCACTGCTCTGACAAGTGAATTC  1132