BAC Information

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BAC

Clone NameB6Ng01-203H07
Chromosome10 (Build37)
Map Location 21,916,442 - 21,917,589
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik, EG432436, LOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e
Downstream geneLOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21, Eya4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203H07.bB6Ng01-203H07.g
ACCGA023665GA023666
length1,1511,192
definitionB6Ng01-203H07.b B6Ng01-203H07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccctagaacagcaatgtcctttctgcaggttccttactagaagg
ctcttaccgctggctctggatgtctaactgctgacttgtatctttaactg
gatctctctctctttagacgtttgctaactttcttcagatgattggtttt
cagctgttcaggttcctgtgaatgggtgctgtctgtattatacaatgtgt
ccttgaaattttcataatattttcagagtattctcttgtaattatattac
tttacaaggtttgtggggcttctctttcatttgtgattacatggttgtac
tataccatttgttctttagtcagactgtaattgtctatgaagttcagtaa
acttttgaaaaactttgttgatattgaatttatcatttctattccatatt
taattcttgctgagacctattccaaatttcttctttaaatttggttgcat
atcattatttattcacgtcccttttgttttatttcacatatgttgattag
ggatgtgttgttggatggacttgatggattatgcctttaattccaccatt
ctggaggcagagatagatctctgaattagtgggaacttctctgatctaca
cagagagttccagcacaggcaggtgtatgcatagaaaccttgtcttgaaa
agatgaaacataaagaaaggaagaaatgtgtggttggggtcaaagtgcag
agaatgtgtgtctgcagaatacaaatgggacatctatgtcataagccctg
ccccgaggcttaggagccatcatgaagaaggaacatcctatccaggtttt
atagtagtaagttttccttcattagcttaatgatttattgttgtcatctt
cgatgtttatttttattatcagtttatggtacacacatatatgcgcacca
tgtcatgcaaagctggcgaaagccagagagacatctgagccccttagaac
tggagtcgaagacatttgtgagccacaatgtcagtgctgagaattaaacc
caggtttctctgggaagaacaccagtgattcttaccacttcaccatctct
tccagttcataaaatattcatttttaagaaagacagaaatgtttatcggg
actgggctattattccgagattcagtcatccatcatcatgcagggaaggc
a
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccagctggtaagaaggacacatgctccactat
gttcatagcagccttatttattatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacacgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaaatgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgcccacagtccaccttaatggatggatcacagggctc
ccaatggaggagctagaagaaagtacccaagagctaaagggatctgcaac
cctaatagtggatcaacattatgaaaaaaccagtaccccaggagctcttg
actctagctgcatatgtatcaaaagatgcctagttcagccatcacttgaa
agagattccaatgacaccaacctttatatgccagatcagaacgcagtcca
aggcaactggccggctcatgggcgacttggcgcctccaacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21916442_21917589
seq2: B6Ng01-203H07.b_47_1197

seq1  GAATTCCCCTAGAACAGCAATGTCCTTTCTGCAGGTTCCTTACTAGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTAGAACAGCAATGTCCTTTCTGCAGGTTCCTTACTAGAAGG  50

seq1  CTCTTACCGCTGGCTCTGGATGTCTAACTGCTGACTTGTATCTTTAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACCGCTGGCTCTGGATGTCTAACTGCTGACTTGTATCTTTAACTG  100

seq1  GATCTCTCTCTCTTTAGACGTTTGCTAACTTTCTTCAGATGATTGGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTCTCTCTTTAGACGTTTGCTAACTTTCTTCAGATGATTGGTTTT  150

seq1  CAGCTGTTCAGGTTCCTGTGAATGGGTGCTGTCTGTATTATACAATGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTCAGGTTCCTGTGAATGGGTGCTGTCTGTATTATACAATGTGT  200

seq1  CCTTGAAATTTTCATAATATTTTCAGAGTATTCTCTTGTAATTATATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAATTTTCATAATATTTTCAGAGTATTCTCTTGTAATTATATTAC  250

seq1  TTTACAAGGTTTGTGGGGCTTCTCTTTCATTTGTGATTACATGGTTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAGGTTTGTGGGGCTTCTCTTTCATTTGTGATTACATGGTTGTAC  300

seq1  TATACCATTTGTTCTTTAGTCAGACTGTAATTGTCTATGAAGTTCAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCATTTGTTCTTTAGTCAGACTGTAATTGTCTATGAAGTTCAGTAA  350

seq1  ACTTTTGAAAAACTTTGTTGATATTGAATTTATCATTTCTATTCCATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGAAAAACTTTGTTGATATTGAATTTATCATTTCTATTCCATATT  400

seq1  TAATTCTTGCTGAGACCTATTCCAAATTTCTTCTTTAAATTTGGTTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTGCTGAGACCTATTCCAAATTTCTTCTTTAAATTTGGTTGCAT  450

seq1  ATCATTATTTATTCACGTCCCTTTTGTTTTATTTCACATATGTTGATTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTATTTATTCACGTCCCTTTTGTTTTATTTCACATATGTTGATTAG  500

seq1  GGATGTGTTGTTGGATGGACTTGATGGATTATGCCTTTAATTCCACCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGTTGTTGGATGGACTTGATGGATTATGCCTTTAATTCCACCATT  550

seq1  CTGGAGGCAGAGATAGATCTCTGAATTAGTGGGAACTTCTCTGATCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGCAGAGATAGATCTCTGAATTAGTGGGAACTTCTCTGATCTACA  600

seq1  CAGAGAGTTCCAGCACAGGCAGGTGTATGCATAGAAACCTTGTCTTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTTCCAGCACAGGCAGGTGTATGCATAGAAACCTTGTCTTGAAA  650

seq1  AGATGAAACATAAAGAAAGGAAGAAATGTGTGGTTGGGGTCAAAGTGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAACATAAAGAAAGGAAGAAATGTGTGGTTGGGGTCAAAGTGCAG  700

seq1  AGAATGTGTGTCTGCAGAATACAAATGGGACATCTATGTCATAAGCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGTGTCTGCAGAATACAAATGGGACATCTATGTCATAAGCCCTG  750

seq1  CCCCGAGGCTTAGGAGCCATCATGAAGAAGGAACATCCTATCCAGGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGAGGCTTAGGAGCCATCATGAAGAAGGAACATCCTATCCAGGTTTT  800

seq1  ATAGTAGTAAGTTTTCCTTCATTAGCTTAATGATTTATTGTTGTCATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGTAAGTTTTCCTTCATTAGCTTAATGATTTATTGTTGTCATCTT  850

seq1  CGATGTTTATTTTTATTATCAGTTTATGGTACACACATATATGCGCACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTTTATTTTTATTATCAGTTTATGGTACACACATATATGCGCACCA  900

seq1  TGTCATGCAAAGCTGGCGAAAGCCAGAGAGACATCTGAGCCCC-TAGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGTCATGCAAAGCTGGCGAAAGCCAGAGAGACATCTGAGCCCCTTAGAAC  950

seq1  TGGAGTCGAAGACATTTGTGAGCCACAATGTCAGTGCTGAGAATTAAACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCGAAGACATTTGTGAGCCACAATGTCAGTGCTGAGAATTAAACC  1000

seq1  CAGG-TTCTCT-GGAAGAACACCCAGTGATCTTAACCACTCCACCATCTC  1047
      |||| |||||| ||||||||| ||||||||  | |||||| |||||||||
seq2  CAGGTTTCTCTGGGAAGAACA-CCAGTGATTCTTACCACTTCACCATCTC  1049

seq1  -TCCAGTTCATAAAATA-TCATTTTTAAGAAAAAACAAAATGTTTAATTG  1095
       |||||||||||||||| |||||||||||||| |   |||||||| || |
seq2  TTCCAGTTCATAAAATATTCATTTTTAAGAAAGACAGAAATGTTT-ATCG  1098

seq1  GGACTGGCTTATAATTTCAGAGATTCAGTCCATCATCATCATGGCAGG--  1143
      |||||||  ||| | ||| |||||||||||   ||||||||| |||||  
seq2  GGACTGGGCTATTA-TTCCGAGATTCAGTCATCCATCATCAT-GCAGGGA  1146

seq1  AGGCA  1148
      |||||
seq2  AGGCA  1151