BAC Information

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BAC

Clone NameB6Ng01-204F19
Chromosome10 (Build37)
Map Location 19,036,289 - 19,037,377
singlet/doubletsinglet
Overlap genenone
Upstream geneNhsl1, Hebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620
Downstream geneOlig3, Ifngr1, Il22ra2, Il20ra, Slc35d3, Pex7, Map3k5, Mtap7, EG621697, Bclaf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204F19.bB6Ng01-204F19.g
ACCGA024328GA024329
length1,102895
definitionB6Ng01-204F19.b B6Ng01-204F19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctgggtataggagcatttttcacaacatacaaaagatagaag
ccacctaagtattgacccagggcatgaacaattcagcaagacagagttta
cacaggccttaaaatgagtactgggtgcatgctatgctggtgtaaatctt
gaagatattaaaggagattaaataaatcaatcactaaaacatagtgtatg
attccatgcatgtgaggaacactggtcagtcaaattcatagcatcagaaa
gcaggtcgggagttgccaggttctgggttgagtatgaacctgttaaaggg
gaagaatttgtgctttggaaaatgagaaaatactggaggttggctgtcta
atagcttggatatagtcagcaccttagaaccgtatatttataaatatcaa
gttatgtttatttagccatatatactttttaaagttacacttgattgaga
gtagatatagtccttttacgaagggaagagaggacaggcctttggttagg
acagactggatttgcttactgtgaaagaaggtgaagccagaagggtgctg
gcctttcccgccttcacagctagctaaacacatattggtaaaaataaaca
gtttttcttttttctaaattaattagtttacattctaaatgctgccccct
ccagtccccttctcacagagtcccttccttctatcctcccccctttctcc
tctcagagggggcccacccaggtgtcccccagccctgatacagcaagact
gcaggattaggctcatcctctcctactgaggccagatgaggcagccctgc
taaactgggattccccagtcagcctacagctttagggacagccccaactt
tggttgttgaggggccacatgggactctgggttgcaccttcttactacat
atgtgccaggggtctcacttctagcccctgtatgttcttttgggtgtggc
tcagctttctgagagcctccccaggggtccagccttcgttgactctaata
aaccaagcattttaaattatgatctttgatgttgtggaggtagaaccttc
atcttctaggtaatggttgtcttcccttacatgtttcccttctccatacc
cc
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctaaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttcctaaacacatgaaac
tcaagaaaaatgaagactgaagtgtggacactatgcccctccttagaagt
gggaacaaaacacccttggaaggagttacagagacaaagtttggagctga
gatgaaaggatggtccatgtagagactgccatatccagggatccacccca
taatcagcatccaaacgctgacaccattgcatacactagcaagattttat
cgaaaggacccagatgtagctgtctcttgtgagactatgccggggcctag
caaacacagaagtggatgctcacagtcagctaatggatggatcacagggc
tcccaatgaaggagctagagaaagtacccaaggagctaaagggatctgca
accctataggtggaacaacatttatgaactaaccagtacccctgagctct
tgactctagctgcatatgtatcaaaagatggccttagtcggccatcactg
gaaagagaggcccgttggacacgcaaactttatatgccccagtacagggg
aacgccagggccaaaaaagggggagtgggtggggtagggggaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_19036289_19037377
seq2: B6Ng01-204F19.b_43_1144 (reverse)

seq1  -GGGGATGGAGA--GAGAACATGTAAGGG-AGACAACCATTACCTAGAAG  46
       ||| |||||||  |  |||||||||||| ||||||||||||||||||||
seq2  GGGGTATGGAGAAGGGAAACATGTAAGGGAAGACAACCATTACCTAGAAG  50

seq1  ATGAAGGTTTCTACCTCCACAACATCAAAAGATCAT-ATTTAAAATGCTT  95
      ||||||| |||||||||||||||||| ||||||||| |||||||||||||
seq2  ATGAAGG-TTCTACCTCCACAACATC-AAAGATCATAATTTAAAATGCTT  98

seq1  -GTTTATTAGAGTCAACG-AGGCTGGACCCCTGGG--AGCTCTCAG-AAG  140
       ||||||||||||||||| ||||||||||||||||   |||||||| |||
seq2  GGTTTATTAGAGTCAACGAAGGCTGGACCCCTGGGGAGGCTCTCAGAAAG  148

seq1  CTGAGCCACCACCCAAAGAACATACAGGGGCTAG-AGTGAGACCCCTGGC  189
      |||||||||  || |||||||||||||||||||| |||||||||||||||
seq2  CTGAGCCACACCCAAAAGAACATACAGGGGCTAGAAGTGAGACCCCTGGC  198

seq1  ACATATGTAGTA--GAGGTGCAACCCAGAGT-CCATGTGGCCCCTCAACA  236
      ||||||||||||   |||||||||||||||| ||||||||||||||||||
seq2  ACATATGTAGTAAGAAGGTGCAACCCAGAGTCCCATGTGGCCCCTCAACA  248

seq1  ACCAAAGTTGGGGCTGTCCCTAAAGCTGTAGGCTGACTGGGGAAT-CCAG  285
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCAAAGTTGGGGCTGTCCCTAAAGCTGTAGGCTGACTGGGGAATCCCAG  298

seq1  TTTAGCAGGGCTGCCTCATCTGGCCTCAGTAGGAGAGGATGAGCCTAATC  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAGGGCTGCCTCATCTGGCCTCAGTAGGAGAGGATGAGCCTAATC  348

seq1  CTGCAGTCTTGCTGTATCAGGGCTGGGGGACACCTGGGTGGGCCCCCTCT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTCTTGCTGTATCAGGGCTGGGGGACACCTGGGTGGGCCCCCTCT  398

seq1  GAGAGGAGAAAGGGGGGAGGATAGAAGGAAGGGACTCTGTGAGAAGGGGA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAAAGGGGGGAGGATAGAAGGAAGGGACTCTGTGAGAAGGGGA  448

seq1  CTGGAGGGGGCAGCATTTAGAATGTAAACTAATTAATTTAGAAAAAAGAA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGGGCAGCATTTAGAATGTAAACTAATTAATTTAGAAAAAAGAA  498

seq1  AAACTGTTTATTTTTACCAATATGTGTTTAGCTAGCTGTGAAGGCGGGAA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTTATTTTTACCAATATGTGTTTAGCTAGCTGTGAAGGCGGGAA  548

seq1  AGGCCAGCACCCTTCTGGCTTCACCTTCTTTCACAGTAAGCAAATCCAGT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCACCCTTCTGGCTTCACCTTCTTTCACAGTAAGCAAATCCAGT  598

seq1  CTGTCCTAACCAAAGGCCTGTCCTCTCTTCCCTTCGTAAAAGGACTATAT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTAACCAAAGGCCTGTCCTCTCTTCCCTTCGTAAAAGGACTATAT  648

seq1  CTACTCTCAATCAAGTGTAACTTTAAAAAGTATATATGGCTAAATAAACA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTCAATCAAGTGTAACTTTAAAAAGTATATATGGCTAAATAAACA  698

seq1  TAACTTGATATTTATAAATATACGGTTCTAAGGTGCTGACTATATCCAAG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGATATTTATAAATATACGGTTCTAAGGTGCTGACTATATCCAAG  748

seq1  CTATTAGACAGCCAACCTCCAGTATTTTCTCATTTTCCAAAGCACAAATT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGACAGCCAACCTCCAGTATTTTCTCATTTTCCAAAGCACAAATT  798

seq1  CTTCCCCTTTAACAGGTTCATACTCAACCCAGAACCTGGCAACTCCCGAC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTTTAACAGGTTCATACTCAACCCAGAACCTGGCAACTCCCGAC  848

seq1  CTGCTTTCTGATGCTATGAATTTGACTGACCAGTGTTCCTCACATGCATG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCTGATGCTATGAATTTGACTGACCAGTGTTCCTCACATGCATG  898

seq1  GAATCATACACTATGTTTTAGTGATTGATTTATTTAATCTCCTTTAATAT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATACACTATGTTTTAGTGATTGATTTATTTAATCTCCTTTAATAT  948

seq1  CTTCAAGATTTACACCAGCATAGCATGCACCCAGTACTCATTTTAAGGCC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGATTTACACCAGCATAGCATGCACCCAGTACTCATTTTAAGGCC  998

seq1  TGTGTAAACTCTGTCTTGCTGAATTGTTCATGCCCTGGGTCAATACTTAG  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAACTCTGTCTTGCTGAATTGTTCATGCCCTGGGTCAATACTTAG  1048

seq1  GTGGCTTCTATCTTTTGTATGTTGTGAAAAATGCTCCTATACCCAGATGA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTCTATCTTTTGTATGTTGTGAAAAATGCTCCTATACCCAGATGA  1098

seq1  ATTC  1089
      ||||
seq2  ATTC  1102