BAC Information

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BAC

Clone NameB6Ng01-205L15
Chromosome10 (Build37)
Map Location 101,045,534 - 101,129,934
singlet/doubletdoublet
Overlap genenone
Upstream gene4930430F08Rik, 1700017N19Rik
Downstream geneMgat4c, LOC667652, Nts, Pamci
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205L15.bB6Ng01-205L15.g
ACCGA025331GA025332
length4261,109
definitionB6Ng01-205L15.b B6Ng01-205L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,045,534 - 101,045,965)(101,128,822 - 101,129,934)
sequence
acttcacattcagcctgatctgttaaattccagcttcccaggagtgcact
ctgggaagcaaattttacccacaggaatttagatgacaacccatgcagtg
cctctctctctctctctctctctctctctctccctccctccccccctctc
tttccctcccttcccccctctctctctttccctccctccctccctccctc
cctctctctctctctctctctctctctctctctctctctctctctctctc
acacacacacacacacacacacacacacacacacacattcatgtgtggga
ccacctgggctattagtaatttgatgctaaatctgttctcctgggagggg
ttgggaaaaaggaatgagtcagtgctcaggagatttcgtgtaaaccttcc
tacaacataaatttgaaaaatatagt
gaattcctttatttacaatgcaattctagcatccagtcttgtgggaaaga
acggggagtgtgagatatatcaccatggcctgtggttcaccttggtatgg
atgtgcataaaagttttccaatgaaaaggcttaattcccaaatgccaaaa
tcagacttcagtcaatattttcaggggtgtaaatgggaagaaagcaaatt
tgcttgatatttgaaaggtaatatattagttaataaggatttactcttct
aatcccttcttcagttgaaaattcactgtggcatctaactcaagtaggaa
gccacggttacttttgaatcatattccgtgcatctgttcctggtcatgtt
gccttctgcacatgtcatggtattttatgttgtatgcttgtttgggcctc
tcccgggtatgaaatggagatacagacgacagcactgaaatacgtatatt
tttgaggagtgattgcagatgatatttgaaacatagatttggactaaagg
gataaaaaatcaaacacaccaaataggtagacagatttaagatttaaaga
ggaccctttcctctgagagaagggttagtcagcctcagttctattttctc
tctcgcctgccacctatagcttgaatgaatgtaagtttcaaaggagttaa
aaaggagcaaacagtaactaatccttactcattttctgcagtcattctga
agcagctgcataataatctctaaatccttgacattacttgattatgcagt
ttaattagcacaacactcatcattgaaggcttgacgtttttcatttctta
tcgcataaccaccttccaaatcacatgtctgaaagttgaaaatgtttata
atgatctattaatcctactgctcatttaccgtgaaaagtatatgttcatt
tctaaaagcatcctgggaatttgtttattactgctaaaattcttccttga
aattgttctgcgtataaaatacaatgttcactaaagtgccatttgttacg
ttgatgaaagatactgatctgttttattttttattagcttgtattaatat
aaatcaatgaattcccactgggaatgatgcatacatattgatttaaaata
tagtgtaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101045534_101045965
seq2: B6Ng01-205L15.b_49_480

seq1  GAATTCACTTCACATTCAGCCTGATCTGTTAAATTCCAGCTTCCCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCACATTCAGCCTGATCTGTTAAATTCCAGCTTCCCAGGAG  50

seq1  TGCACTCTGGGAAGCAAATTTTACCCACAGGAATTTAGATGACAACCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCTGGGAAGCAAATTTTACCCACAGGAATTTAGATGACAACCCAT  100

seq1  GCAGTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCCC  150

seq1  CCTCTCTTTCCCTCCCTTCCCCCCTCTCTCTCTTTCCCTCCCTCCCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTCCCTCCCTTCCCCCCTCTCTCTCTTTCCCTCCCTCCCTCCC  200

seq1  TCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250

seq1  TCTCTCACACACACACACACACACACACACACACACACACACATTCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACACACACACACACACACACACACACACACACACACATTCATGT  300

seq1  GTTGGACCTCCTGGGCTATTTGTAATTTGATGCTAATTCTGTTCTCCTGG  350
      || ||||| ||||||||||| ||||||||||||||| |||||||||||||
seq2  GTGGGACCACCTGGGCTATTAGTAATTTGATGCTAAATCTGTTCTCCTGG  350

seq1  GAGGGGTTGTGAACAAGGAATGAGTCAGCACTCAGGTGATTTCCTGTAAA  400
      ||||||||| ||| ||||||||||||||  |||||| |||||| ||||||
seq2  GAGGGGTTGGGAAAAAGGAATGAGTCAGTGCTCAGGAGATTTCGTGTAAA  400

seq1  CCTTCCTCCAACATTAATTTGTAAAATAAAGT  432
      ||||||| |||||| |||||| |||||| |||
seq2  CCTTCCTACAACATAAATTTGAAAAATATAGT  432

seq1: chr10_101128822_101129934
seq2: B6Ng01-205L15.g_63_1171 (reverse)

seq1  ATTACA-TATATTTTAAATTCATATGTATGCATTCATTCACAGTGGGAAT  49
      |||||| ||||||||||||  ||||||||||| |||||| ||||||||||
seq2  ATTACACTATATTTTAAATCAATATGTATGCA-TCATTCCCAGTGGGAAT  49

seq1  TCATTGAATTTATAATTAATACAAGCTAATAAAAAATAAAACAGATCAGT  99
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  TCATTG-ATTTAT-ATTAATACAAGCTAATAAAAAATAAAACAGATCAGT  97

seq1  ATCTTTCATCAACGTAACAAATGGCACTTTAGTGAACAATTGTATTTTAT  149
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCTTTCATCAACGTAACAAATGGCACTTTAGTGAAC-ATTGTATTTTAT  146

seq1  ACGCAGAACAATTTCAAGGAAGAATTTTTAGCAGTAATAAACAAATTCCC  199
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACGCAGAACAATTTCAAGGAAGAA-TTTTAGCAGTAATAAACAAATTCCC  195

seq1  AGGATGCTTTTAGAAATGAACATATACTTTTCACGGTAAATGAGCAGTAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTTTTAGAAATGAACATATACTTTTCACGGTAAATGAGCAGTAG  245

seq1  GATTAATAGATCATTATAAACATTTTCAACTTTCAGACATGTGATTTGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATAGATCATTATAAACATTTTCAACTTTCAGACATGTGATTTGGA  295

seq1  AGGTGGTTATGCGATAAGAAATGAAAAACGTCAAGCCTTCAATGATGAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTTATGCGATAAGAAATGAAAAACGTCAAGCCTTCAATGATGAGT  345

seq1  GTTGTGCTAATTAAACTGCATAATCAAGTAATGTCAAGGATTTAGAGATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGCTAATTAAACTGCATAATCAAGTAATGTCAAGGATTTAGAGATT  395

seq1  ATTATGCAGCTGCTTCAGAATGACTGCAGAAAATGAGTAAGGATTAGTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCAGCTGCTTCAGAATGACTGCAGAAAATGAGTAAGGATTAGTTA  445

seq1  CTGTTTGCTCCTTTTTAACTCCTTTGAAACTTACATTCATTCAAGCTATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGCTCCTTTTTAACTCCTTTGAAACTTACATTCATTCAAGCTATA  495

seq1  GGTGGCAGGCGAGAGAGAAAATAGAACTGAGGCTGACTAACCCTTCTCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGGCGAGAGAGAAAATAGAACTGAGGCTGACTAACCCTTCTCTC  545

seq1  AGAGGAAAGGGTCCTCTTTAAATCTTAAATCTGTCTACCTATTTGGTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAGGGTCCTCTTTAAATCTTAAATCTGTCTACCTATTTGGTGTG  595

seq1  TTTGATTTTTTATCCCTTTAGTCCAAATCTATGTTTCAAATATCATCTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTTTATCCCTTTAGTCCAAATCTATGTTTCAAATATCATCTGC  645

seq1  AATCACTCCTCAAAAATATACGTATTTCAGTGCTGTCGTCTGTATCTCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCCTCAAAAATATACGTATTTCAGTGCTGTCGTCTGTATCTCCA  695

seq1  TTTCATACCCGGGAGAGGCCCAAACAAGCATACAACATAAAATACCATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACCCGGGAGAGGCCCAAACAAGCATACAACATAAAATACCATGA  745

seq1  CATGTGCAGAAGGCAACATGACCAGGAACAGATGCACGGAATATGATTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCAGAAGGCAACATGACCAGGAACAGATGCACGGAATATGATTCA  795

seq1  AAAGTAACCGTGGCTTCCTACTTGAGTTAGATGCCACAGTGAATTTTCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACCGTGGCTTCCTACTTGAGTTAGATGCCACAGTGAATTTTCAA  845

seq1  CTGAAGAAGGGATTAGAAGAGTAAATCCTTATTAACTAATATATTACCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAGGGATTAGAAGAGTAAATCCTTATTAACTAATATATTACCTT  895

seq1  TCAAATATCAAGCAAATTTGCTTTCTTCCCATTTACACCCCTGAAAATAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATCAAGCAAATTTGCTTTCTTCCCATTTACACCCCTGAAAATAT  945

seq1  TGACTGAAGTCTGATTTTGGCATTTGGGAATTAAGCCTTTTCATTGGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAAGTCTGATTTTGGCATTTGGGAATTAAGCCTTTTCATTGGAAA  995

seq1  ACTTTTATGCACATCCATACCAAGGTGAACCACAGGCCATGGTGATATAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATGCACATCCATACCAAGGTGAACCACAGGCCATGGTGATATAT  1045

seq1  CTCACACTCCCCGTTCTTTCCCACAAGACTGGATGCTAGAATTGCATTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACTCCCCGTTCTTTCCCACAAGACTGGATGCTAGAATTGCATTGT  1095

seq1  AAATAAAGGAATTC  1113
      ||||||||||||||
seq2  AAATAAAGGAATTC  1109