BAC Information

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BAC

Clone NameB6Ng01-208F01
Chromosome10 (Build37)
Map Location 129,729,966 - 129,731,091
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4
Downstream gene5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208F01.bB6Ng01-208F01.g
ACCGA027230GA027231
length1,2161,131
definitionB6Ng01-208F01.b B6Ng01-208F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcatagcgacacactattgccttattcaaacatcagcagaaaa
attacatgtacgtgcagggtgccagagttctatgagttgttgactcagtt
tagatagccctgttatgtcttcacattcccctttatcttatggtcaagat
gttcccaggaatgtattaactacagggcatacccaggtttgtttttctct
tttctcagccccaggcagcctctaggctcacaaacaaccagtaatttctg
agtactttatatgacttacaggtcttgaaatttcatctttctttcattcc
cctcttcttctactaagtaattctaatcttagaatttcagaagtctatat
ctctatgtggagaatagaaatcatactctttttatcttaactataggttg
gtgttgacgatggagtaccataagctgtattgtaactttaacatggaaac
aaaaacagaataagaaggaatagtaaacagaactaggcagggacccttct
agtgagacttgagggtctcagcatgatgcaggtgcatgtagatcagacct
ctggctggaactggtgagatgtctttggggtacccggctcgttcgctgta
gccagttgtgaccggacttctttctgcaccacctgaaagccttttaactt
agcatacagattagtattataacaacataggtttaaacacatcatttaag
acagtgatgggcatgggagctccataaaggatctcaaaaagagtaagact
gaatcaagagggagtatttctagttccaaatagggcaaggggaaggagca
ccaagtctgtgccagtatccatgcttaattttgtcaagatctcttttaga
gttctatttattctttctatctgtcctgagctctgagatctgtacacaca
atgtaattttcatttgacctctaaatacttgggcaccaccctgacttacc
tggcaacaaaggcagggccatctgacactattgcttttggcactccgaac
ttggaaatttttctttaataatcttctgatgacttatctgagcagtctca
tttttacagggaaaacttctattcatctgagaacatccacaaaacgaaag
gattcataccacattaatttcctcagtaagtctattctcagtagaatgtt
aggctggtctcaaggagcacatatttcttccttccagttcatactatcta
taacacgagagagctc
gaattctcctcctctgtgacaccctgcccccactgcaccccgtttgcagg
cacacactggtcactggtcaggatccctttgctccttccctcctctattg
cttggtaattgtattctccacctcccagtgtcatgctaatacaagttcct
ggcacagctgtccagattaaattagaatgcagaccagcaggctgactaat
tatattttctgggttagaattgtcttcttctatctttggggtactggtcc
aataaagaataaatgagcagtgccaatatttactgaggatatttgactct
ttttgcctgggtggttttgtcttcccagccaatttgggccccttgaatta
gattaggaccatatgagagaatatagttttactccaaggaactccacact
cccatccaaactctgctcagtagggccaaacggaggatgacaggggactt
ttccttaaaaataagcctcaaccaccgtctccacatgtccatctgttctt
ataaagcagtttttctgtcacatgtctgtgccttctttcctgcagtgatc
actgttgaattcttgttctgtcttcctcagtactggggactgggtttaga
accttacacttatgaagaaggcactatactactgagtcacattctctgta
ctcgtttaattttttatttgtagtcagggtcttattgggttgtccaggat
agctttggatgcattctgtagcatgtgcagggtttggattctgataatcc
atccttggcttccctagtagctggaattacagttatatgccaccaaacct
tagaaaatactttttacttctgtctcacataaaaaattaatgctactgta
attattaattattaatacaaagcattttcaggaattgccttttagattat
gcctttttcttgctgatagttggaaaaataagtttttttttaatgataac
agggtcttcctttttaaaataattcttttaataagacaaaactatctgtt
aatatttgtcacaataatattttattctcatgcacttatgctatggtatt
ctaacataacgggaacgaaaaatgtgaagtcatctctttgcttggagagt
tctagcatgagccatagtaaccacacatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129729966_129731091
seq2: B6Ng01-208F01.g_64_1194 (reverse)

seq1  ATCATGTGT-GCTACTAT-GCTCAATGGCTATGACCTCCTTCAAAGCAAG  48
      ||||||||| | |||||| |||||   |||| || |||  || |||||| 
seq2  ATCATGTGTGGTTACTATGGCTCA--TGCTA-GAACTC--TCCAAGCAA-  44

seq1  AATTATGACTTCACA-TTTTCTGTCCCCTTATGTTAG-ATACCATAGCAT  96
      |   ||||||||||| |||||  |||| ||||||||| ||||||||||||
seq2  AGAGATGACTTCACATTTTTCGTTCCCGTTATGTTAGAATACCATAGCAT  94

seq1  AAGTGCATGAGA--TAAATATTATTGTGACAAATATTAACAGATAGTTTT  144
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  AAGTGCATGAGAATAAAATATTATTGTGACAAATATTAACAGATAGTTTT  144

seq1  GTCTTTATTAAAG-ATTATTTTAAAAAGGAAGACCCTGTTATCATT-AAA  192
      |||||  | |||| |||||||||||||||||||||||||||||||| |||
seq2  GTCTTATTAAAAGAATTATTTTAAAAAGGAAGACCCTGTTATCATTAAAA  194

seq1  AAAAACT--ATTTTCCAACTATCAGCAAG-AAAAGGCATAATCTAAAAGG  239
      |||||||   ||||||||||||||||||| ||||||||||||||||||||
seq2  AAAAACTTATTTTTCCAACTATCAGCAAGAAAAAGGCATAATCTAAAAGG  244

seq1  CAATTCCTGAAAATGCTTTGTATTAATAATTAATAATTACAGTAGCATTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCTGAAAATGCTTTGTATTAATAATTAATAATTACAGTAGCATTA  294

seq1  ATTTTTTATGTGAGACAGAAGTAAAAAGTATTTTCTAAGGTTTGGTGGCA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTATGTGAGACAGAAGTAAAAAGTATTTTCTAAGGTTTGGTGGCA  344

seq1  TATAACTGTAATTCCAGCTACTAGGGAAGCCAAGGATGGATTATCAGAAT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGTAATTCCAGCTACTAGGGAAGCCAAGGATGGATTATCAGAAT  394

seq1  CCAAACCCTGCACATGCTACAGAATGCATCCAAAGCTATCCTGGACAACC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCCTGCACATGCTACAGAATGCATCCAAAGCTATCCTGGACAACC  444

seq1  CAATAAGACCCTGACTACAAATAAAAAATTAAACGAGTACAGAGAATGTG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGACCCTGACTACAAATAAAAAATTAAACGAGTACAGAGAATGTG  494

seq1  ACTCAGTAGTATAGTGCCTTCTTCATAAGTGTAAGGTTCTAAACCCAGTC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTAGTATAGTGCCTTCTTCATAAGTGTAAGGTTCTAAACCCAGTC  544

seq1  CCCAGTACTGAGGAAGACAGAACAAGAATTCAACAGTGATCACTGCAGGA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACTGAGGAAGACAGAACAAGAATTCAACAGTGATCACTGCAGGA  594

seq1  AAGAAGGCACAGACATGTGACAGAAAAACTGCTTTATAAGAACAGATGGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGCACAGACATGTGACAGAAAAACTGCTTTATAAGAACAGATGGA  644

seq1  CATGTGGAGACGGTGGTTGAGGCTTATTTTTAAGGAAAAGTCCCCTGTCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGAGACGGTGGTTGAGGCTTATTTTTAAGGAAAAGTCCCCTGTCA  694

seq1  TCCTCCGTTTGGCCCTACTGAGCAGAGTTTGGATGGGAGTGTGGAGTTCC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCGTTTGGCCCTACTGAGCAGAGTTTGGATGGGAGTGTGGAGTTCC  744

seq1  TTGGAGTAAAACTATATTCTCTCATATGGTCCTAATCTAATTCAAGGGGC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAAAACTATATTCTCTCATATGGTCCTAATCTAATTCAAGGGGC  794

seq1  CCAAATTGGCTGGGAAGACAAAACCACCCAGGCAAAAAGAGTCAAATATC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGGCTGGGAAGACAAAACCACCCAGGCAAAAAGAGTCAAATATC  844

seq1  CTCAGTAAATATTGGCACTGCTCATTTATTCTTTATTGGACCAGTACCCC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAAATATTGGCACTGCTCATTTATTCTTTATTGGACCAGTACCCC  894

seq1  AAAGATAGAAGAAGACAATTCTAACCCAGAAAATATAATTAGTCAGCCTG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGAAGAAGACAATTCTAACCCAGAAAATATAATTAGTCAGCCTG  944

seq1  CTGGTCTGCATTCTAATTTAATCTGGACAGCTGTGCCAGGAACTTGTATT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTGCATTCTAATTTAATCTGGACAGCTGTGCCAGGAACTTGTATT  994

seq1  AGCATGACACTGGGAGGTGGAGAATACAATTACCAAGCAATAGAGGAGGG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGACACTGGGAGGTGGAGAATACAATTACCAAGCAATAGAGGAGGG  1044

seq1  AAGGAGCAAAGGGATCCTGACCAGTGACCAGTGTGTGCCTGCAAACGGGG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCAAAGGGATCCTGACCAGTGACCAGTGTGTGCCTGCAAACGGGG  1094

seq1  TGCAGTGGGGGCAGGGTGTCACAGAGGAGGAGAATTC  1126
      |||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGGGGGCAGGGTGTCACAGAGGAGGAGAATTC  1131