BAC Information

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BAC

Clone NameB6Ng01-209G02
Chromosome10 (Build37)
Map Location 123,478,050 - 123,646,146
singlet/doubletdoublet
Overlap genenone
Upstream geneMon2, Usp15, LOC100042958, AI851790
Downstream gene4930503E24Rik, LOC671416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209G02.bB6Ng01-209G02.g
ACCGA028012GA028013
length8041,138
definitionB6Ng01-209G02.b B6Ng01-209G02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,645,343 - 123,646,146)(123,478,050 - 123,479,184)
sequence
gaattccctagaaaatcaatctgtgttttcaagaaatagaattctcaatc
caagggtcccttctctccgctttgatttgagtgaatgtattcacttcata
gtcatgaacataaaactacaaaggactagaaaaacataagatgcaaatat
ctgtgtaaatcaaattttattacttttactttagttgcagattattatta
ctgctgctattgtggcacaaataatagcgaataagtaccatagagtgtgc
agttttactatttccttactcaaagaacaaattactgggcccctgacaga
acctgtacattttgtgtcagggagttataaaatgtatgtgtatgaatata
tatttattcagaattacatggattttgttgtgcaataaaaatcatcattt
tctttctataccttgacaataaagcagaagagaaaaagtcttagcctaaa
aaatatgctagtatgattttaggacattgatgattaatacacaggagttg
aaaattttcagttcatggttcccagagtgaaaatagctttggcaggctgc
atatagtatgtataaaaagacacactagcggtgcatacacagtgccaaga
gctccatctgtgtatgtacagcatcctgagctgagctatggttgctgggg
gagatctaactttctaatgtacttcctgcagcatctttcagaattgttct
tcactgaatacttttgctcctataactaattagatattgaaaatggcatg
tgcgatgcaggaataatagtgtgtgtgtgtgtgtgtaatatatatagttg
tgtg

gaattccatgaccaatggacttggaaaaatatgtagatacatgctcagga
tgatatgaattataggacctagtctgtaggtacatatttttaagtgtatt
caccttccagtattttctataaattaaaaattctaataaagatatagata
ctgatagacaaaagtttgtacactgtatcacatctgaaatttattccaaa
agaagaaattaaggaacataatagacttactgtaagtgcatttttgaata
cataggatgaagtcttctaatgctacaattttatttgaaactataaaaca
aaagcaaaggagatatatatatatatatatatatatatatatataaagca
aactataacaaaagcagaaatcatagaaacatggtaagccttgcaataag
taagattctaactataaaatgaaggtagagtgcatatggatacctcttat
taaattctatttttttcatacttgattttttttttctaaataaagtgctg
gaacaagccaataaagtttcgtggtaaatgttgagatttgttatgcctga
acttctgagtcatctggatatataaggatctgatacactgttgtgtgggt
taaaacagagaggtgatgcgagggagcaatcatacctctctttgcagtgg
gacatgagaagatagcacaggcatctgagcgatgtccaaaggctctgaaa
agcatcatttggagacaatacttaataaccagcatcaagacagtgcttca
ttttctgaaaaatatattcatattttcctttttatggaaaacatctgaaa
gtcaaggctttcatacttcagctttgtgtgcatctcaggatgcaaatgta
ttcacttttcagtgaaaacagaacatacttaatgcacacagttgcatagt
ctttcatgggatttgaagaagaattcttgaaatctgcatagcatcacact
acctgcaacagctttgcttcagctgggatcacatgggccttctctcattg
gcttctttttcaagatttactagtatgtcataaacaacatagaatctttg
tattaattctttaaaattaagaaactatttcctcattatgagcctggctt
ttgtgcttttattatccatttaatttgtggtgtgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123645343_123646146
seq2: B6Ng01-209G02.b_42_845 (reverse)

seq1  CACACAAATATATATATTACACACACACACACACACTATTATTCCTGCAT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAACTATATATATTACACACACACACACACACTATTATTCCTGCAT  50

seq1  CGCACATGCCATTTTCAATATCTAATTAGTTATAGGAGCAAAAGTATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACATGCCATTTTCAATATCTAATTAGTTATAGGAGCAAAAGTATTCA  100

seq1  GTGAAGAACAATTCTGAAAGATGCTGCAGGAAGTACATTAGAAAGTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAACAATTCTGAAAGATGCTGCAGGAAGTACATTAGAAAGTTAGA  150

seq1  TCTCCCCCAGCAACCATAGCTCAGCTCAGGATGCTGTACATACACAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCAGCAACCATAGCTCAGCTCAGGATGCTGTACATACACAGATG  200

seq1  GAGCTCTTGGCACTGTGTATGCACCGCTAGTGTGTCTTTTTATACATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTTGGCACTGTGTATGCACCGCTAGTGTGTCTTTTTATACATACT  250

seq1  ATATGCAGCCTGCCAAAGCTATTTTCACTCTGGGAACCATGAACTGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAGCCTGCCAAAGCTATTTTCACTCTGGGAACCATGAACTGAAAA  300

seq1  TTTTCAACTCCTGTGTATTAATCATCAATGTCCTAAAATCATACTAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTCCTGTGTATTAATCATCAATGTCCTAAAATCATACTAGCAT  350

seq1  ATTTTTTAGGCTAAGACTTTTTCTCTTCTGCTTTATTGTCAAGGTATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAGGCTAAGACTTTTTCTCTTCTGCTTTATTGTCAAGGTATAGA  400

seq1  AAGAAAATGATGATTTTTATTGCACAACAAAATCCATGTAATTCTGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGATGATTTTTATTGCACAACAAAATCCATGTAATTCTGAATA  450

seq1  AATATATATTCATACACATACATTTTATAACTCCCTGACACAAAATGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATTCATACACATACATTTTATAACTCCCTGACACAAAATGTAC  500

seq1  AGGTTCTGTCAGGGGCCCAGTAATTTGTTCTTTGAGTAAGGAAATAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTGTCAGGGGCCCAGTAATTTGTTCTTTGAGTAAGGAAATAGTAA  550

seq1  AACTGCACACTCTATGGTACTTATTCGCTATTATTTGTGCCACAATAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCACACTCTATGGTACTTATTCGCTATTATTTGTGCCACAATAGCA  600

seq1  GCAGTAATAATAATCTGCAACTAAAGTAAAAGTAATAAAATTTGATTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAATAATAATCTGCAACTAAAGTAAAAGTAATAAAATTTGATTTAC  650

seq1  ACAGATATTTGCATCTTATGTTTTTCTAGTCCTTTGTAGTTTTATGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATTTGCATCTTATGTTTTTCTAGTCCTTTGTAGTTTTATGTTCA  700

seq1  TGACTATGAAGTGAATACATTCACTCAAATCAAAGCGGAGAGAAGGGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATGAAGTGAATACATTCACTCAAATCAAAGCGGAGAGAAGGGACC  750

seq1  CTTGGATTGAGAATTCTATTTCTTGAAAACACAGATTGATTTTCTAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATTGAGAATTCTATTTCTTGAAAACACAGATTGATTTTCTAGGGA  800

seq1  ATTC  804
      ||||
seq2  ATTC  804


seq1: chr10_123478050_123479184
seq2: B6Ng01-209G02.g_66_1203

seq1  GAATTCCATGACCAATGGACTTGGAAAAATATGTAGATACATGCTCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGACCAATGGACTTGGAAAAATATGTAGATACATGCTCAGGA  50

seq1  TGATATGAATTATAGGACCTAGTCTGTAGGTACATATTTTTAAGTGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGAATTATAGGACCTAGTCTGTAGGTACATATTTTTAAGTGTATT  100

seq1  CACCTTCCAGTATTTTCTATAAATTAAAAATTCTAATAAAGATATAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCCAGTATTTTCTATAAATTAAAAATTCTAATAAAGATATAGATA  150

seq1  CTGATAGACAAAAGTTTGTACACTGTATCACATCTGAAATTTATTCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGACAAAAGTTTGTACACTGTATCACATCTGAAATTTATTCCAAA  200

seq1  AGAAGAAATTAAGGAACATAATAGACTTACTGTAAGTGCATTTTTGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAATTAAGGAACATAATAGACTTACTGTAAGTGCATTTTTGAATA  250

seq1  CATAGGATGAAGTCTTCTAATGCTACAATTTTATTTGAAACTATAAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGATGAAGTCTTCTAATGCTACAATTTTATTTGAAACTATAAAACA  300

seq1  AAAGCAAAGGAGATATATATATATATATATATATATATATATATAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGGAGATATATATATATATATATATATATATATATATAAAGCA  350

seq1  AACTATAACAAAAGCAGAAATCATAGAAACATGGTAAGCCTTGCAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAACAAAAGCAGAAATCATAGAAACATGGTAAGCCTTGCAATAAG  400

seq1  TAAGATTCTAACTATAAAATGAAGGTAGAGTGCATATGGATACCTCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTCTAACTATAAAATGAAGGTAGAGTGCATATGGATACCTCTTAT  450

seq1  TAAATTCTATTTTTTTCATACTTGATTTTTTTTTTCTAAATAAAGTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTATTTTTTTCATACTTGATTTTTTTTTTCTAAATAAAGTGCTG  500

seq1  GAACAAGCCAATAAAGTTTCGTGGTAAATGTTGAGATTTGTTATGCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCCAATAAAGTTTCGTGGTAAATGTTGAGATTTGTTATGCCTGA  550

seq1  ACTTCTGAGTCATCTGGATATATAAGGATCTGATACACTGTTGTGTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGAGTCATCTGGATATATAAGGATCTGATACACTGTTGTGTGGGT  600

seq1  TAAAACAGAGAGGTGATGCGAGGGAGCAATCATACCTCTCTTTGCAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGAGAGGTGATGCGAGGGAGCAATCATACCTCTCTTTGCAGTGG  650

seq1  GACATGAGAAGATAGCACAGGCATCTGAGCGATGTCCAAAGGCTCTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAGAAGATAGCACAGGCATCTGAGCGATGTCCAAAGGCTCTGAAA  700

seq1  AGCATCATTTGGAGACAATACTTAATAACCAGCATCAAGACAGTGCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATTTGGAGACAATACTTAATAACCAGCATCAAGACAGTGCTTCA  750

seq1  TTTTCTGAAAAATATATTCATATTTTCCTTTTTATGGAAAACATCTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAAAAATATATTCATATTTTCCTTTTTATGGAAAACATCTGAAA  800

seq1  GTCAAGGCTTTCATACTTCAGCTTTGTGTGCATCTCAGGATGCAAATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGCTTTCATACTTCAGCTTTGTGTGCATCTCAGGATGCAAATGTA  850

seq1  TTCAC-TTTCAGTGAAAACAGAACATACTTAATGCACACAGTTGCATAGT  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTTCAGTGAAAACAGAACATACTTAATGCACACAGTTGCATAGT  900

seq1  CTTTCAT-GGATTTGAAG-AGAA-TCTTGAAATCTGCATAGCATCACACT  946
      ||||||| |||||||||| |||| ||||||||||||||||||||||||||
seq2  CTTTCATGGGATTTGAAGAAGAATTCTTGAAATCTGCATAGCATCACACT  950

seq1  ACCTGCAACAGCTTTGCTTCAGCTGGGATCACAT-GGCCTTCTCTCATTG  995
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCTGCAACAGCTTTGCTTCAGCTGGGATCACATGGGCCTTCTCTCATTG  1000

seq1  GCTTC-TTTTCAAGATTTACTAGTATGTCATAAACACAATTAGAATCTTT  1044
      ||||| |||||||||||||||||||||||||||||| |  ||||||||||
seq2  GCTTCTTTTTCAAGATTTACTAGTATGTCATAAACA-ACATAGAATCTTT  1049

seq1  GTATTAAAATTCTTTAAAATAAAGAAACTATTT-CTCATTATGAGCCTGG  1093
      |||||  ||||||||||||| |||||||||||| |||||||||||||| |
seq2  GTATT--AATTCTTTAAAATTAAGAAACTATTTCCTCATTATGAGCCT-G  1096

seq1  GCTTTTGTGCTTTTATTTATCCATTT-ATTTGTGGTGTGTATG  1135
      ||||||||||||||| |||||||||| ||||||||||||||||
seq2  GCTTTTGTGCTTTTA-TTATCCATTTAATTTGTGGTGTGTATG  1138


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