MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-211D16
Chromosome	10 (Build37)
Map Location	3,469,401 - 3,470,601
singlet/doublet	singlet
Overlap gene	Oprm1
Upstream gene	Cnksr3, A130090K04Rik
Downstream gene	LOC237252, LOC100041224, Rgs17
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cnksr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215748 MGI:2674130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Oprm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18390 MGI:97441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A130090K04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320495 MGI:2444159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC237252 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100041224 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Rgs17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56533 MGI:1927469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnksr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802317 GeneID:215748 MGI:2674130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Cnksr family member 3 transcript_id : NM_172546.2

name	Oprm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89001113 GeneID:18390 MGI:97441
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opioid receptor, mu 1 transcript_id : NM_001039652.1

name	A130090K04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701886 GeneID:320495 MGI:2444159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A130090K04 gene transcript_id : NM_001033391.1

name	LOC100041224 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260614 GeneID:100041224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to ubiquitin-conjugating enzyme E2 UbcH-ben transcript_id : XM_001476000.1

name	Rgs17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388938 GeneID:56533 MGI:1927469
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 17 transcript_id : NM_019958.3

name	Cnksr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369772 CCDS:CCDS23670.1 GeneID:215748 MGI:2674130
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : membrane associated guanylate kinase interacting protein-like 1; maguin-like protein product : Cnksr family member 3 protein_id : NP_766134.1

name	Oprm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89001114 GeneID:18390 MGI:97441
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004988 - mu-opioid receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007610 - behavior [Evidence IMP]; GO:0007191 - dopamine receptor, adenylate cyclase activating pathway [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : mu opioid receptor mMOR-1R1; mu opiod receptor 1 splice variant Eiii; mu opiod receptor 1 splice variant Eiv product : opioid receptor, mu 1 protein_id : NP_001034741.1

name	A130090K04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701887 CCDS:CCDS23671.1 GeneID:320495 MGI:2444159
definition	codon_start : 1 product : hypothetical protein LOC320495 protein_id : NP_001028563.1

name	LOC100041224 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260615 GeneID:100041224
definition	codon_start : 1 product : similar to ubiquitin-conjugating enzyme E2 UbcH-ben protein_id : XP_001476050.1

name	LOC237252 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260613 GeneID:237252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Tripartite motif-containing 59 pseudo : _no_value transcript_id : XR_032502.1

clone name	MSMg01-518B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-482B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157O23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-301L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-211D16.b	B6Ng01-211D16.g
ACC	GA029357	GA029358
length	1,221	1,206
definition	B6Ng01-211D16.b	B6Ng01-211D16.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctctacagaaaagattagtgtgatggtacctgtttttgagaaaat ttatataaaaaatttaatttatttaggatattttattacctatttcatat ttgctgatttgtgttacttttgtgatttttgatgcattatacaaattccc tgaagttggcacatttacttttgttgttttatatatttatttattatatt tttaatgtctgtggaatctgtattggtaacccttgttttaattgctgatt tcagtaatgtgtgccccccccttttttttttttgcagttttgctagaaac ttacaagttactgtccagactataatccttttaattttattgattttatg tactgcatttgttctcaatttttagttatattttctgggagaagtaaagg aaactacctctatgccgtcttcccagaaataggattttctgaggcttttt ttttttttctgaagaaactttttcatatgcaagtctcttctgcttttcag gtgtctaaattttgggtggaaccatccagaaaggaaacttctaatcttta atggtaagtgtcatgttaagagaaagagtaagatgatttgaggaacacga ggcagggtatctcagagtgctgtctagaggtggtggtgtcatatttaaat atgcaaaaacaaaagcaactggttacatgagtggaaaaggagggaggaca cttgagagcagggaaagcatgatatatatgaaaaatgacaattctcttgc tgaagcagatagtctatgtcttagttaggcttttactgctgtgaaggaac accatgaccaaggcaactctcataagggcatttaatttggggctggctta caggtttcagagattcagtcccatttatttattcatgggacacacatggc aatgtactggtaaacatgggctctggggaaagggagctgagagttctcca tctttgatctgaaggcagccaggaaaagactattgtgtctcactctgggc agaaacatgagcatatatattaacctatctcaaagtcctgccctcccttg tgacactctgatcctccaagaagaccattacctactctaacaaaggccac cacttactaatagtgccacctgtcctggggacaggcatattccaaattcc catagtctgtgtttttagggtggagatgataagcatgagcatgttcctta tcagggccgaactatgaaaac	gaattctttgctaacaacactcatatattggtctgtcttacattgtgtaa ctgagctaatttactggaactccatagagagatatgagccaaaagacatc tggtggtgtgctgcagtttctgccacttccatggacttgggctgattggt agagtgatgtcagctaagcagacacatgtgctgaggcaagacacatgctg aggtaagacacatggaagacacttgatatttggagggtataaataggact caacagatggtgactgaggcttgtttataaaactagctgtgaaatgtttt ggggtctttcatcttcacttatcttcacttccatgagagaggcataaccg agaactactcctggtgtacttcccattgacttgagcctaggctagctcat gtgatcactcctgatgcatgtttcctatcctgactctatctgtgaaatgt ttgtaagtagactcagctgctgctgctgacctgtgaactgaactgctgat ttccaggcaacacaaatggcagctgctccaaagaacctttctaaacaggt ccacttctcctgtatcttttctttcccactacctctggtgggtggtgggc tagcagggaggtcaaagcatttaagaaccattattaaaaataggttttga aaaaattatagttacaaagaactcaatgggttattctagtgagagtttag agaccaaagttctgacagaatctggatgataaatactaggttcataaatt ttcagatagaaaaataaagtttatcagaagttgggctaatggtcattctt actagattctatcagagaatctgactacatcatcatcatgatctaaaaat atgggtgaggctaaatataaaaataatggagtgtttatttagcagggaaa atgcccaagacagtattcacttgcttgtacaatgattatttgcttggctg agaactaggaaagaaggaaaatgactctttaccacaaaaacagagagatg tatacacaaagctgacaggaacatgcaatgttacacctgggaataaaaat actgttatgatctggtggtcctgtatcctctgagtcagtctgtgcaaggt ggagcacttgactgccaaagggtgtagcagggtgaatgcgaacgaccagc ttagacagctgaagcgaaccagtcctcggacaagaaacccccattttttg tgggtc
quality values	Open. 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Hide. 62 47 51 47 62 62 62 62 62 62 38 39 31 34 44 34 28 37 44 59 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 62 62 59 59 62 59 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 54 62 62 52 52 54 62 52 54 54 62 62 62 58 58 58 58 54 58 58 58 58 58 58 45 52 58 58 48 58 54 44 52 54 54 58 58 49 54 54 54 52 48 54 58 58 58 54 53 54 58 58 58 58 58 58 58 58 58 54 49 58 58 58 58 58 58 58 58 58 54 58 54 42 58 54 58 58 58 58 58 54 54 58 42 49 58 52 52 54 45 49 58 58 54 50 58 49 54 58 53 35 58 58 34 21 51 46 50 52 58 51 52 52 34 48 49 51 53 58 46 58 50 47 43 34 58 42 53 53 53 52 58 49 58 47 50 39 48 48 37 58 58 58 51 46 58 58 58 58 52 40 51 46 47 50 33 49 58 46 49 40 58 49 45 58 49 50 51 53 37 51 50 58 58 52 53 50 29 17 28 41 47 53 58 58 58 58 46 58 38 58 58 23 31 10 10 15 29 33 40 39 51 58 41 49 39 49 52 50 40 37 30 18 15 37 37 52 52 54 51 21 26 42 39 24 42 54 53 40 35 41 45 38 39 35 34 35 45 35 45 32 54 38 37 54 54 49 32 25 28 51 24 52 32 46 54 54 54 34 34 38 54 42 37 34 54 30 37 31 40 39 10 17 31 31 35 42 31 51 41 34 33 35 39 42 53 53 27 40 30 42 52 34 45 52 32 45 32 42 23 22 13 31 40 39 31 32 40 33 24 41 18 51 19 29 32 31 34 42 25 36 39 45 20 41 34 31 39 35 31 41 32 26 31 52 29 31 40 43 39 53 51 51 46 30 31 32 32 46 46 31 30 27 17 21 23 31 31 51 32 30 28 31 31 51 51 51 32 21 14 33 31 46 31 32 18 23 22 17 46 24 20 15 48 43 31 18 32 27 23 46 14 33 46 46 30 13 28 13 40 11 24 32 23 42 32 31 21 26 31 38 12 18 24 31 39 22 25 14 22 6 24 19 24 31 25 21 21 30 27 31 11 14 6 38 13 30 18 11 8 41 30 26 32 25 38 11 36 37 33 30 23 11 17 26 44 30 20 27 29 21 16 31 44 44 29 21 32 25 18 20 22 24 44 38 10 8 5 5 12 8 44 20 43 6 13 10 11 22 9 18 17 21 10 19 10 8 11 12 21 8 11 20 47 31 23 16 27 32 30 22 7 26 11 16 7 30 7 18 34 14 12 11 17 11 26 29 7 7 11 6 11 13 23 48 26 6 5 6 8 37 31 28 13 11 7 16 7 6 8 7 18 16 16 27 18 18 14 7 10 5 3 3 6 16 11 8 11 6 8 27 20 16 24 24 24 24 12 4 6 17 6 8 11 27 12 15 8 22 9 9 7 23 25 7 5 9 13 4 11 9 10 15 6 9 2 8 16 23 9 7 8 12 12 9 30 19 6 6 4 6 3 3 3 6 11 12 8 14 20 18 6 6 2 1 3 3 2 1 3 5 8 9 3 2 8 12 5 17 3 5 6 16 4 4 5 14 17 6 17 11 12 7 6 4 6 8 5 9 5 11 2 3 3 2 4 8 5 4 18 15 5 6 13 15 23 6 3 8 23 17 12 5 11 5 4 18 25 4 5 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_3469401_3470601
seq2: B6Ng01-211D16.b_45_1265

seq1  GAATTCTCTACAGAAAAGATTAGTGTGATGGTACCTGTTTTTGAGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACAGAAAAGATTAGTGTGATGGTACCTGTTTTTGAGAAAAT  50

seq1  TTATATAAAAAATTTAATTTATTTAGGATATTTTATTACCTATTTCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAAAAATTTAATTTATTTAGGATATTTTATTACCTATTTCATAT  100

seq1  TTGCTGATTTGTGTTACTTTTGTGATTTTTGATGCATTATACAAATTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATTTGTGTTACTTTTGTGATTTTTGATGCATTATACAAATTCCC  150

seq1  TGAAGTTGGCACATTTACTTTTGTTGTTTTATATATTTATTTATTATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTGGCACATTTACTTTTGTTGTTTTATATATTTATTTATTATATT  200

seq1  TTTAATGTCTGTGGAATCTGTATTGGTAACCCTTGTTTTAATTGCTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTCTGTGGAATCTGTATTGGTAACCCTTGTTTTAATTGCTGATT  250

seq1  TCAGTAATGTGTGCCCCCCCCTTTTTTTTTTTTGCAGTTTTGCTAGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATGTGTGCCCCCCCCTTTTTTTTTTTTGCAGTTTTGCTAGAAAC  300

seq1  TTACAAGTTACTGTCCAGACTATAATCCTTTTAATTTTATTGATTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGTTACTGTCCAGACTATAATCCTTTTAATTTTATTGATTTTATG  350

seq1  TACTGCATTTGTTCTCAATTTTTAGTTATATTTTCTGGGAGAAGTAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCATTTGTTCTCAATTTTTAGTTATATTTTCTGGGAGAAGTAAAGG  400

seq1  AAACTACCTCTATGCCGTCTTCCCAGAAATAGGATTTTCTGAGGCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACCTCTATGCCGTCTTCCCAGAAATAGGATTTTCTGAGGCTTTTT  450

seq1  TTTTTTTTCTGAAGAAACTTTTTCATATGCAAGTCTCTTCTGCTTTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTGAAGAAACTTTTTCATATGCAAGTCTCTTCTGCTTTTCAG  500

seq1  GTGTCTAAATTTTGGGTGGAACCATCCAGAAAGGAAACTTCTAATCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAAATTTTGGGTGGAACCATCCAGAAAGGAAACTTCTAATCTTTA  550

seq1  ATGGTAAGTGTCATGTTAAGAGAAAGAGTAAGATGATTTGAGGAACACGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAGTGTCATGTTAAGAGAAAGAGTAAGATGATTTGAGGAACACGA  600

seq1  GGCAGGGTATCTCAGAGTGCTGTCTAGAGGTGGTGGTGTCATATTTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGTATCTCAGAGTGCTGTCTAGAGGTGGTGGTGTCATATTTAAAT  650

seq1  ATGCAAAAACAAAAGCAACTGGTTACATGAGTGGAAAAGGAGGGAGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAAACAAAAGCAACTGGTTACATGAGTGGAAAAGGAGGGAGGACA  700

seq1  CTTGAGAGCAGGGAAAGCATGATATATATGAAAAATGACAATTCTCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGCAGGGAAAGCATGATATATATGAAAAATGACAATTCTCTTGC  750

seq1  TGAAGCAGATAGTCTATGTCTTAGTTAGGCTTTTACTGCTGTGAAGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGATAGTCTATGTCTTAGTTAGGCTTTTACTGCTGTGAAGGAAC  800

seq1  ACCATGACCAAGGCAACTCTCATAAGGGCATTTAA-TTGGGGCTGGCTTA  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACCATGACCAAGGCAACTCTCATAAGGGCATTTAATTTGGGGCTGGCTTA  850

seq1  CAGG-TTCAGAGATTCAGTCC--ATTATT--ATCATGGGACACACATGGC  894
      |||| ||||||||||||||||   |||||   ||||||||||||||||||
seq2  CAGGTTTCAGAGATTCAGTCCCATTTATTTATTCATGGGACACACATGGC  900

seq1  AATGTACTGGTAAACAT-GGCTCTGGG--AAAGGAGCTGAGAGTTCTCCA  941
      ||||||||||||||||| |||||||||  || ||||||||||||||||||
seq2  AATGTACTGGTAAACATGGGCTCTGGGGAAAGGGAGCTGAGAGTTCTCCA  950

seq1  TC-TTGATCTGAAGGCAGCCAGGAAAAGACTATTGTGTCTCACTCTGGGC  990
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATCTGAAGGCAGCCAGGAAAAGACTATTGTGTCTCACTCTGGGC  1000

seq1  AG-AACATGAGCATATATATT-ACCTATCTCAAAGTCCTG-CCTCCCCTG  1037
      || |||||||||||||||||| |||||||||||||||||| |||||| ||
seq2  AGAAACATGAGCATATATATTAACCTATCTCAAAGTCCTGCCCTCCCTTG  1050

seq1  TGACACTCTGAT-CTCCAAGAAGACCA-TACCTACTCTAACAAA-GCCA-  1083
      |||||||||||| |||||||||||||| |||||||||||||||| |||| 
seq2  TGACACTCTGATCCTCCAAGAAGACCATTACCTACTCTAACAAAGGCCAC  1100

seq1  CACCTACTAATAGTGCCA-CTGTC--TGGGCCAAGCATATT-CAAATCAC  1129
      ||| |||||||||||||| |||||   ||| || ||||||| |||||  |
seq2  CACTTACTAATAGTGCCACCTGTCCTGGGGACAGGCATATTCCAAATTCC  1150

seq1  CATAGTCTGTG-TTTTAGG--TGAGATGATAAGGCATGAGGCCATGTCCT  1176
      ||||||||||| |||||||   |||||||||| |||||||  ||||| | 
seq2  CATAGTCTGTGTTTTTAGGGTGGAGATGATAA-GCATGAG--CATGTTCC  1197

seq1  TAATCAGGGGCCAGACTATGAAAAC  1201
      | |||| |||||  |||||||||||
seq2  TTATCA-GGGCCGAACTATGAAAAC  1221

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information