BAC Information

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BAC

Clone NameB6Ng01-211G24
Chromosome10 (Build37)
Map Location 31,210,221 - 31,337,240
singlet/doubletdoublet
Overlap geneIbrdc1, LOC666055
Upstream geneTrmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294
Downstream geneLOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211G24.bB6Ng01-211G24.g
ACCGA029505GA029506
length1441,157
definitionB6Ng01-211G24.b B6Ng01-211G24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,337,097 - 31,337,240)(31,210,221 - 31,211,353)
sequence
gaattctcatcaactgcagacaagagagaacttttctaatcaacttataa
atacattataaagtagataactaacaggaggataattacatactgtcttg
ggtgtgtagatccttggaaaataaaatacagagagcgagggggg

gaattcatctgtcatagatcagttcattggccaggctgtaagaaaatggt
aggcttttgcttcaaggccagttgggaatgtttgctctcagaactcagct
cccatactggcaggaagtcaaagaagcttactgtgagtatgatgggaaag
agaaccaaggattgggtcatatactccaacactttagaaaaacagccaaa
cactgaggtcttagaggctaatgcacattcttggggatgtggaaaagttc
agttctcagcttcacttactggctttgttctaaagtgagtgggtcagaaa
ggcagaatattgctgttccggagtcccggaagtcaaaatattggcactgc
aatgctctttctggaagttctaggccaggattctgctactctcttgtgtt
tatttggcaagatgggagcttcactccagccatgtggtcatctcttctag
acggtagacaaatgtcatctggaagctagggctacattccagtcacactt
tcaaaggaggaatggaaaagcttcctttttgaaatggcagggcatgagaa
gtaatggtaccctcctacaggagccacgccgtcaggtgagtgacacggaa
tccctcagagtacaaaacaatgtgtgttgaatgaaacaaggtaactgaga
ccttgagcaaagttatatatttaatcaatacttaagtccagaaatgtgtt
atgtattagtcaccaaaacaatttgccttttgggacatttcaaatgacat
cctagactcaatgtgtaataatcagtgtaaactacctttgtctagtgttc
atgcctatcattaaagattcatctttgtatttggctatgttgcaaaggaa
agtcactaaactgaaagtatgagctaatatttactgaaagtttatgaaga
gcaaggtaatataatatgcacttaaacaccatatttaaacccagtttaag
ccctcaagactgccctttagacatgtgctatcttcatatgaaaagggaaa
cccttaatcacagcaaagtttaagttaacatgccctgaattacatagcct
tgaagtatgtaatttctcagtttggggaacttgagcttagtcacttgaag
ctattgttatataactaccctcgaaggctcaccttcagcttgtgacagaa
ggttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31337097_31337240
seq2: B6Ng01-211G24.b_43_186 (reverse)

seq1  CCCCCCTCGCTCTCTGTATTTTATTTTCCAAGGATCTACACACCCAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCGCTCTCTGTATTTTATTTTCCAAGGATCTACACACCCAAGAC  50

seq1  AGTATGTAATTATCCTCCTGTTAGTTATCTACTTTATAATGTATTTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTAATTATCCTCCTGTTAGTTATCTACTTTATAATGTATTTATAA  100

seq1  GTTGATTAGAAAAGTTCTCTCTTGTCTGCAGTTGATGAGAATTC  144
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTAGAAAAGTTCTCTCTTGTCTGCAGTTGATGAGAATTC  144


seq1: chr10_31210221_31211353
seq2: B6Ng01-211G24.g_69_1225

seq1  GAATTCATCTGTCATAGATCAGTTCATTGGCCAGGCTGTAAGAAAATGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGTCATAGATCAGTTCATTGGCCAGGCTGTAAGAAAATGGT  50

seq1  AGGCTTTTGCTTCAAGGCCAGTTGGGAATGTTTGCTCTCAGAACTCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTGCTTCAAGGCCAGTTGGGAATGTTTGCTCTCAGAACTCAGCT  100

seq1  CCCATACTGGCAGGAAGTCAAAGAAGCTTACTGTGAGTATGATGGGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACTGGCAGGAAGTCAAAGAAGCTTACTGTGAGTATGATGGGAAAG  150

seq1  AGAACCAAGGATTGGGTCATATACTCCAACACTTTAGAAAAACAGCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAAGGATTGGGTCATATACTCCAACACTTTAGAAAAACAGCCAAA  200

seq1  CACTGAGGTCTTAGAGGCTAATGCACATTCTTGGGGATGTGGAAAAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGGTCTTAGAGGCTAATGCACATTCTTGGGGATGTGGAAAAGTTC  250

seq1  AGTTCTCAGCTTCACTTACTGGCTTTGTTCTAAAGTGAGTGGGTCAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAGCTTCACTTACTGGCTTTGTTCTAAAGTGAGTGGGTCAGAAA  300

seq1  GGCAGAATATTGCTGTTCCGGAGTCCCGGAAGTCAAAATATTGGCACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATATTGCTGTTCCGGAGTCCCGGAAGTCAAAATATTGGCACTGC  350

seq1  AATGCTCTTTCTGGAAGTTCTAGGCCAGGATTCTGCTACTCTCTTGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTTTCTGGAAGTTCTAGGCCAGGATTCTGCTACTCTCTTGTGTT  400

seq1  TATTTGGCAAGATGGGAGCTTCACTCCAGCCATGTGGTCATCTCTTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCAAGATGGGAGCTTCACTCCAGCCATGTGGTCATCTCTTCTAG  450

seq1  ACGGTAGACAAATGTCATCTGGAAGCTAGGGCTACATTCCAGTCACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTAGACAAATGTCATCTGGAAGCTAGGGCTACATTCCAGTCACACTT  500

seq1  TCAAAGGAGGAATGGAAAAGCTTCCTTTTTGAAATGGCAGGGCATGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAGGAATGGAAAAGCTTCCTTTTTGAAATGGCAGGGCATGAGAA  550

seq1  GTAATGGTACCCTCCTACAGGAGCCACGCCGTCAGGTGAGTGACACGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGTACCCTCCTACAGGAGCCACGCCGTCAGGTGAGTGACACGGAA  600

seq1  TCCCTCAGAGTACAAAACAATGTGTGTTGAATGAAACAAGGTAACTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGAGTACAAAACAATGTGTGTTGAATGAAACAAGGTAACTGAGA  650

seq1  CCTTGAGCAAAGTTATATATTTAATCAATACTTAAGTCCAGAAATGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGCAAAGTTATATATTTAATCAATACTTAAGTCCAGAAATGTGTT  700

seq1  ATGTATTAGTCACCAAAACAATTTGCCTTTTGGGACATTTCAAATGACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTAGTCACCAAAACAATTTGCCTTTTGGGACATTTCAAATGACAT  750

seq1  CCTAGACTCAATGTGTAATAATCAGTGTAAACTACCTTTGTCTAGTGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACTCAATGTGTAATAATCAGTGTAAACTACCTTTGTCTAGTGTTC  800

seq1  ATGCCTATCATTAAAGATTCATC-TTGTA-TTGGCTATGTTGCAAAGGAA  848
      ||||||||||||||||||||||| ||||| ||||||||||||||||||||
seq2  ATGCCTATCATTAAAGATTCATCTTTGTATTTGGCTATGTTGCAAAGGAA  850

seq1  AGTCACT-AACTG-AAGTATGAGCTAATATTTACTGAAAGTTTATGAAGA  896
      ||||||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  AGTCACTAAACTGAAAGTATGAGCTAATATTTACTGAAAGTTTATGAAGA  900

seq1  GCAAGGTAATATAATATGCACTTAAACA-CATA-TTAAACCCAG-TTAAG  943
      |||||||||||||||||||||||||||| |||| |||||||||| |||||
seq2  GCAAGGTAATATAATATGCACTTAAACACCATATTTAAACCCAGTTTAAG  950

seq1  -CCTCAAGACTG-CCTTTAGACATGTGCTATCTTCATATGAAAA-GGAAA  990
       ||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  CCCTCAAGACTGCCCTTTAGACATGTGCTATCTTCATATGAAAAGGGAAA  1000

seq1  CCC-TAATCACAGCAAAG-TTAAG-TAACATGCCCTGAATTACATAGCCT  1037
      ||| |||||||||||||| ||||| |||||||||||||||||||||||||
seq2  CCCTTAATCACAGCAAAGTTTAAGTTAACATGCCCTGAATTACATAGCCT  1050

seq1  GGAAGTATGTAA-TTCTCAG-TTGGGGAAC-TGAGCTAAG-CACT--GAG  1081
       ||||||||||| ||||||| ||||||||| |||||| || ||||   ||
seq2  TGAAGTATGTAATTTCTCAGTTTGGGGAACTTGAGCTTAGTCACTTGAAG  1100

seq1  CTAT--GTACAT-ACCACCTTCAGAAGCCCACC-TCAGC-TGTGACAGAG  1126
      ||||   || || || ||| ||  | || |||| ||||| ||||||||| 
seq2  CTATTGTTATATAACTACCCTCGAAGGCTCACCTTCAGCTTGTGACAGAA  1150

seq1  GGTTAAA  1133
      |||||||
seq2  GGTTAAA  1157


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