BAC Information

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BAC

Clone NameB6Ng01-211H19
Chromosome10 (Build37)
Map Location 56,549,111 - 56,710,261
singlet/doubletdoublet
Overlap geneLOC100042628, EG629739
Upstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355
Downstream geneLOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211H19.bB6Ng01-211H19.g
ACCGA029543GA029544
length877970
definitionB6Ng01-211H19.b B6Ng01-211H19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,709,389 - 56,710,261)(56,549,111 - 56,549,816)
sequence
gaattctaacaaatatgttttttgaaatcatgaaagaaatgagacaagaa
agtttcatctcaggacttggtattattatatggcttaggtatattaatca
ttctgtattaatgaaatataccttttcagtattaatctgaattggaacaa
cttgaaatatgtaaatgtcctataattagcagactctttatgggtattga
attttttattggtcagaaccatcacaaaatatatgatagtaatgtcatat
aggtttagaattaaattaggtttttttcctttgtgaattcaaagcaatga
taaaatgttgttcaaatgttggaatgatatatctctaccaatcaacactt
atcagaatccatagtctccaagcaaacaaaacaaatagcgtgagtgtatt
tgtgtgggaaaaaaggagagaggggaagagggaggggagacagggggatg
ggaacactttaaagaactgtagaggcttcataagtcaaattaggaagaag
agatggtgtgcagtccagagatgttgctgagtccagagatacagggagta
cactatagagccaggagagtcactgttactgacaatggacaacggcagcc
tactgagaactcccggtagcttggaagaagtctatctcttaataagttca
tccagttgtattttagctgtgtagttgatggcagacacactgtggaaggc
aatctactttttatctaaagtctactgatttaatattaattctcatccaa
aatcatcacagaataaataagcaggaaaatgctgccccgaattctaggtg
atgggtcaagacaagttgacagaacaatgggtcattgctgaattagtggg
ttctagaattcattccttttaagatgg
gaattcctgccaggtggttgtatagcggcttcaatttctttggcagcaac
aactccactttatccatgagttggtggtagatggaccacagtccttgggc
actgggtgctgtgtcctcgttcctggctgacaacagagggtggctaggtc
actttctctctacagcgctggggcatccacctctgccctagggtgccctt
cccaggctcttgattgggagacttttaatgattgcatctatttccttaga
ggctatgggactgtttacatagtttatgtggtcctgatttatgtttggta
cctaacaaaacctgatttatgttttgtacctaaaacattgtccatttcat
ctagattttctagttttgttgagtataggcttttgtagtaggatctgata
atttttttgaatttcctcaattttttgttgttatgtctctcttttcattt
ctgatttgttaatttggatactgtctctgtgctctttatttagtttggct
aagtgtttatctatgttggtgattttctcaaagaactggctcttagtttt
gcagatttttttgtatagttctctttatttctacttgatgaacttcagtc
ctgagtttgattatttcctgcatctactcctcttgggtggatttgcttct
ttctgttctagagcattcagatgtgctgttcagatgataatacaagctct
tgctaatttctttatgaaggtactcaatgctgtgaattttcctcttagca
tgctttcattgtgttctgtaagtttgggtatactctgacttcattgttgt
taaattccagaaagtctttaattcttccttgagcaagttatcattgaata
gagaatttttcagtttccatgaatatgtgtgttttctgttatttttgttg
ttattgaagaccaatcttactctggggtgatctggtagaatgcatggggt
taattgaattcttcttgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56709389_56710261
seq2: B6Ng01-211H19.b_48_924 (reverse)

seq1  CCATCTTAAAA-GAATGAATTCTAAGAACCACTAACTCAGCAATGA-CCA  48
      ||||||||||| ||||||||||||  | ||||||| |||||||||| |||
seq2  CCATCTTAAAAGGAATGAATTCTAGAACCCACTAATTCAGCAATGACCCA  50

seq1  TTGTTCTGTCAACTTGTCTTGACCCATCACCTAGAATTCGGGGCAGCATT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTCAACTTGTCTTGACCCATCACCTAGAATTCGGGGCAGCATT  100

seq1  TTCCTGCTTATTTATTCTGTGATGATTTTGGATGAG-ATTAATATTAAAT  147
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCCTGCTTATTTATTCTGTGATGATTTTGGATGAGAATTAATATTAAAT  150

seq1  CAGTAGACTTTAGAT-AAAAGTAGATTGCCTTCCACAGTGTGTCTGCCAT  196
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGTAGACTTTAGATAAAAAGTAGATTGCCTTCCACAGTGTGTCTGCCAT  200

seq1  CAACTACACAGCTAAAATACAACTGGATGAACTTATTAAGAGATAGACTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACACAGCTAAAATACAACTGGATGAACTTATTAAGAGATAGACTT  250

seq1  CTTCCAAGCTACCGGGAGTTCTCAGTAGGCTGCCGTTGTCCATTGTCAGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAGCTACCGGGAGTTCTCAGTAGGCTGCCGTTGTCCATTGTCAGT  300

seq1  AACAGTGACTCTCCTGGCTCTATAGTGTACTCCCTGTATCTCTGGACTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGACTCTCCTGGCTCTATAGTGTACTCCCTGTATCTCTGGACTCA  350

seq1  GCAACATCTCTGGACTGCACACCATCTCTTCTTCCTAATTTGACTTATGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATCTCTGGACTGCACACCATCTCTTCTTCCTAATTTGACTTATGA  400

seq1  AGCCTCTACAGTTCTTTAAAGTGTTCCCATCCCCCTGTCTCCCCTCCCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTACAGTTCTTTAAAGTGTTCCCATCCCCCTGTCTCCCCTCCCTC  450

seq1  TTCCCCTCTCTCCTTTTTTCCCACACAAATACACTCACGCTATTTGTTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTCTCCTTTTTTCCCACACAAATACACTCACGCTATTTGTTTT  500

seq1  GTTTGCTTGGAGACTATGGATTCTGATAAGTGTTGATTGGTAGAGATATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGGAGACTATGGATTCTGATAAGTGTTGATTGGTAGAGATATA  550

seq1  TCATTCCAACATTTGAACAACATTTTATCATTGCTTTGAATTCACAAAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCAACATTTGAACAACATTTTATCATTGCTTTGAATTCACAAAGG  600

seq1  AAAAAAACCTAATTTAATTCTAAACCTATATGACATTACTATCATATATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCTAATTTAATTCTAAACCTATATGACATTACTATCATATATT  650

seq1  TTGTGATGGTTCTGACCAATAAAAAATTCAATACCCATAAAGAGTCTGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATGGTTCTGACCAATAAAAAATTCAATACCCATAAAGAGTCTGCT  700

seq1  AATTATAGGACATTTACATATTTCAAGTTGTTCCAATTCAGATTAATACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAGGACATTTACATATTTCAAGTTGTTCCAATTCAGATTAATACT  750

seq1  GAAAAGGTATATTTCATTAATACAGAATGATTAATATACCTAAGCCATAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTATATTTCATTAATACAGAATGATTAATATACCTAAGCCATAT  800

seq1  AATAATACCAAGTCCTGAGATGAAACTTTCTTGTCTCATTTCTTTCATGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATACCAAGTCCTGAGATGAAACTTTCTTGTCTCATTTCTTTCATGA  850

seq1  TTTCAAAAAACATATTTGTTAGAATTC  873
      |||||||||||||||||||||||||||
seq2  TTTCAAAAAACATATTTGTTAGAATTC  877

seq1: chr10_56549111_56549816
seq2: B6Ng01-211H19.g_64_769

seq1  GAATTCCTGCCAGGTGGTTGTATAGCGGCTTCAATTTCTTTGGCAGCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCAGGTGGTTGTATAGCGGCTTCAATTTCTTTGGCAGCAAC  50

seq1  AACTCCACTTTATCCATGAGTTGGTGGTAGATGGACCACAGTCCTTGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCACTTTATCCATGAGTTGGTGGTAGATGGACCACAGTCCTTGGGC  100

seq1  ACTGGGTGCTGTGTCCTCGTTCCTGGCTGACAACAGAGGGTGGCTAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGCTGTGTCCTCGTTCCTGGCTGACAACAGAGGGTGGCTAGGTC  150

seq1  ACTTTCTCTCTACAGCGCTGGGGCATCCACCTCTGCCCTAGGGTGCCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCTCTACAGCGCTGGGGCATCCACCTCTGCCCTAGGGTGCCCTT  200

seq1  CCCAGGCTCTTGATTGGGAGACTTTTAATGATTGCATCTATTTCCTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTCTTGATTGGGAGACTTTTAATGATTGCATCTATTTCCTTAGA  250

seq1  GGCTATGGGACTGTTTACATAGTTTATGTGGTCCTGATTTATGTTTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGGGACTGTTTACATAGTTTATGTGGTCCTGATTTATGTTTGGTA  300

seq1  CCTAACAAAACCTGATTTATGTTTTGTACCTAAAACATTGTCCATTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAAAACCTGATTTATGTTTTGTACCTAAAACATTGTCCATTTCAT  350

seq1  CTAGATTTTCTAGTTTTGTTGAGTATAGGCTTTTGTAGTAGGATCTGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTTCTAGTTTTGTTGAGTATAGGCTTTTGTAGTAGGATCTGATA  400

seq1  ATTTTTTTGAATTTCCTCAATTTTTTGTTGTTATGTCTCTCTTTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTGAATTTCCTCAATTTTTTGTTGTTATGTCTCTCTTTTCATTT  450

seq1  CTGATTTGTTAATTTGGATACTGTCTCTGTGCTCTTTATTTAGTTTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTGTTAATTTGGATACTGTCTCTGTGCTCTTTATTTAGTTTGGCT  500

seq1  AAGTGTTTATCTATGTTGGTGATTTTCTCAAAGAACTGGCTCTTAGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTATCTATGTTGGTGATTTTCTCAAAGAACTGGCTCTTAGTTTT  550

seq1  GCAGATTTTTTTGTATAGTTCTCTTTATTTCTACTTGATGAACTTCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTTTTTGTATAGTTCTCTTTATTTCTACTTGATGAACTTCAGTC  600

seq1  CTGAGTTTGATTATTTCCTGCATCTACTCCTCTTGGGTGGATTTGCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTGATTATTTCCTGCATCTACTCCTCTTGGGTGGATTTGCTTCT  650

seq1  TTCTGTTCTAGAGCATTCAGATGTGCTGTTCAGATGATAATACAAGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCTAGAGCATTCAGATGTGCTGTTCAGATGATAATACAAGCTCT  700

seq1  TGCTAA  706
      ||||||
seq2  TGCTAA  706