BAC Information

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BAC

Clone NameB6Ng01-211I12
Chromosome10 (Build37)
Map Location 75,646,714 - 75,804,882
singlet/doubletdoublet
Overlap geneSlc5a4a, LOC100040150, Prmt2, S100b, Dip2a
Upstream geneSpecc1l, LOC100040670, Adora2a, EG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b
Downstream genePcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211I12.bB6Ng01-211I12.g
ACCGA029573GA029574
length270385
definitionB6Ng01-211I12.b B6Ng01-211I12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,646,714 - 75,646,983)(75,804,492 - 75,804,882)
sequence
agtgggaaaagagcatacagaaaaagtatggggctttataatatcacttg
tggtacataactcaaataggggtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtatgtgcacacaactgaaattttcatcaccatta
tttctgggacagtagcagataatctgagagccaagcaaatgtttatcatt
ttgccacctatatgtaataaacaatactagtatgtaaatgtgtattatat
ttatattttatacattgcca
cttacaacctgggtttgtcattggaaggtacgggaagaactcaatacagg
taagcggctgccttcgtgggaaacagtgctgaaggagatagtacctgggc
agtctagaaagtagtgttcctccctcagctgcacacaagcaggggagagt
tggtgttacctggacaatctggaaaatcctgtggctctcccctcagctgt
ccgtcatcagtgactagacagaagaagcacctttctggttttgttcataa
aacatggtctcattccccaacattatcatggtatttatcatctaccatgt
tgataagggctgactctcagagtaggttctcagagtaggtgtgtgtgtgt
atatgtatgtttgtgaatattgtatgtgtgtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_75646714_75646983
seq2: B6Ng01-211I12.b_52_321

seq1  AGTGGGAAAAGAGCATACAGAAAAAGTATGGGGCTTTATAATATCACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAAAGAGCATACAGAAAAAGTATGGGGCTTTATAATATCACTTG  50

seq1  TGGTACATAACTCAAATAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACATAACTCAAATAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100

seq1  TGTGTGTGTGTGTGTGTATGTGCACACAACTGAAATTTTCAGCACCATTA  150
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTGTGTGTGTGTGTGTATGTGCACACAACTGAAATTTTCATCACCATTA  150

seq1  TTTCTGGGACAGTAGCAGATAATCTGAGAGCCAAGCAAATGTTTATCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGACAGTAGCAGATAATCTGAGAGCCAAGCAAATGTTTATCATT  200

seq1  TTGCCACCTATATGTAATAAACAATACTAGTATGTAAATGTGTATTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACCTATATGTAATAAACAATACTAGTATGTAAATGTGTATTATAT  250

seq1  TTATATTTTATACATTGCCA  270
      ||||||||||||||||||||
seq2  TTATATTTTATACATTGCCA  270

seq1: chr10_75804492_75804882
seq2: B6Ng01-211I12.g_69_459 (reverse)

seq1  CAACACACACATACAATATTCACAAACATACATATACACACACACACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACACACATACAATATTCACAAACATACATATACACACACACACCTA  50

seq1  CTCTGAGAACCTACTCTGAGAGTCAGCCCTTATCAACATGGTAGATGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGAACCTACTCTGAGAGTCAGCCCTTATCAACATGGTAGATGATA  100

seq1  AATACCATGATAATGTTGGGGAATGAGACCATGTTTTATGAACAAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCATGATAATGTTGGGGAATGAGACCATGTTTTATGAACAAAACCA  150

seq1  GAAAGGTGCTTCTTCTGTCTAGTCACTGATGACGGACAGCTGAGGGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTGCTTCTTCTGTCTAGTCACTGATGACGGACAGCTGAGGGGAGA  200

seq1  GCCACAGGATTTTCCAGATTGTCCAGGTAACACCAACTCTCCCCTGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGGATTTTCCAGATTGTCCAGGTAACACCAACTCTCCCCTGCTTG  250

seq1  TGTGCAGCTGAGGGAGGAACACTACTTTCTAGACTGCCCAGGTACTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGCTGAGGGAGGAACACTACTTTCTAGACTGCCCAGGTACTATCT  300

seq1  CCTTCAGCACTGTTTCCCACGAAGGCAGCCGCTTACCTGTATTGAGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCACTGTTTCCCACGAAGGCAGCCGCTTACCTGTATTGAGTTCT  350

seq1  TCCCGTACCTTCCAATGACAAACCCAGGTTGTAAGGAATTC  391
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTACCTTCCAATGACAAACCCAGGTTGTAAGGAATTC  391