BAC Information

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BAC

Clone NameB6Ng01-214H19
Chromosome10 (Build37)
Map Location 77,249,668 - 77,371,830
singlet/doubletdoublet
Overlap geneLOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3
Upstream genePcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281
Downstream geneTrpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl, D10Jhu81e, Pwp2, Tmem1, Agpat3, LOC100041500, Rrp1, Cstb, Pdxk, EG665862, Olfr1358, LOC546482, Ilvbl, Syde1, Olfr1357, LOC665890, Casp14, Ccdc105, Slc1a6, Olfr1356, GA_x5J8B7W4DUT-12263-11330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214H19.bB6Ng01-214H19.g
ACCGA031721GA031722
length1,0851,077
definitionB6Ng01-214H19.b B6Ng01-214H19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,370,747 - 77,371,830)(77,249,668 - 77,250,741)
sequence
gaattctggacgatccaggaatccctggagatccaagaatcccgggagat
ctaggatttctgggaaaaacaaggattatagtggcacagaggaggtcgcc
tggctcaaactgttgaagaaaaaaaaaaaggatataaaaagcaaccggct
ctgctctggctggcctggcagctccttgtccaccttatgtcatgcgatta
agtcactgcatgcattaatatcatgatggtgcacagatgggggtggggtg
agcacgtgggagcaaaacaaaccaatctcatgcccaccagctgagagatt
cactgagagatgcaggtcatggtttcctccaagggtacctctgcaatgac
tggagacaccccctattccaattcagttccacctcctgaaggtcccacca
ccttccagaagcaccgtgtcaggggtgaagcctccaacattcaaggtatg
aacccaaatcacagtcccatgcctagtccaagaaggcagacaaggaaaca
aagacatgctgagagatttcttaagagctcctctgcttccaggtcatccc
ttaaccaagccagtgatgccaggagacaccacaggccttaacagctatgg
tctggccctcatgctgacccgctctctctggatttctcctggctgtcatt
tgtcttaggagctcattatactgatgcaggctggttgacactgacttctt
agcttcccctacctgcagcagggcctcagacgtctgtttgtctgtagcga
ccttttcagtgttgagcatcctgtgtattcagttccagtgtgtctgctgc
cttcccacagctgcgtggacttgctggacaggacatttttagtggcactt
taaaaggtgtgttacagttttccccttacccagttggctcccaataattg
agactgagctattacatttattttacagctgtgagggcacaataactgag
cagttattactcttatttttaatctatcctaatctggctacctccaggca
aaatccctgtgctacttgcatttttatggtttctctgcttcaagtgtttt
ctcatgaactatcctggaccccactttcgctcttc
gaattcctgtgaagctacaaccctgagtttctcccagggtttcaggacaa
gggcatgccttatctcctctccaagatatgcctctttctcacaatgaaac
cctttccaaggatttatcagagtcactctgtgagccccaagacaggaaag
tcctggcccagacccagaggaggtagaacccggatcccagtatcagagca
tggaacaaggggacagaagctgtgtaaagactccaagcctcacagctgaa
gatacagagatagtggaagaggataacagtcactgtggagacataatcga
tcagaagaacttttattaatatgcattggtcgagagtagtacagctgacc
acagatgcagggtcatccagacagggagggaggaagaagccagctctcct
gtgacctggtgaggaggaatctgctgggccttctaaggggtcgagctaca
ctcaggtttctcgtcagactgtacacatctttcttctgagctgtgcctcc
atcagtagcaaccacaggctgatggaggtgtggttctgtgccctgctgcc
ttagtggggcctggccctcagcagctggacttctgtccacagcaggcctg
tctgcagcaggcagggcggcacagcagggacacagaggaggttgggccac
agcagctgggctggcaggaggaggcacagcaggaggaggtgggcacacag
caggcaggtctgcacactgggcgacacagcagggacaggctggagcaggg
cttgcagcacacaggagcacagcagagggctggcagcaggaggaggagcc
agagcagatgggtgtgcagcacacaggcttgcagcagataggcacacagc
aggggattgacagcatgaggactggcagctagactgctggcagcatggtc
cagagcagatgggtgtgcagcagacaggcttgcagcaaagggtcaccaca
gcaggatggctggcaggtggagcagttgcagccagctggctggcagctag
actgcctggcagcattgaggtgtgcagccagaagatttgcagcaggggct
tgacaccacagcctcactgggggtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_77370747_77371830
seq2: B6Ng01-214H19.b_48_1132 (reverse)

seq1  GAAGAGAGAAAGT-GGGTCCAGGATAGTTCATGAGAAAACACTTGAAGCA  49
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCGAAAGTGGGGTCCAGGATAGTTCATGAGAAAACACTTGAAGCA  50

seq1  GAGAAAACCAT-AAAATGCAAGTAGCACAGGGATTTTGCCTGGGAGGTAG  98
      ||| ||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  GAG-AAACCATAAAAATGCAAGTAGCACAGGGATTTTGCCT-GGAGGTAG  98

seq1  CCAGATTAGGATAGATTAAAA--TAGAGTAATAACTGCTCAGTTATTGTG  146
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  CCAGATTAGGATAGATTAAAAATAAGAGTAATAACTGCTCAGTTATTGTG  148

seq1  CCCTCACAGCTGTAAAATAAATGTAATAGCTCAGTCTCAATTATTTGGGA  196
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCTCACAGCTGTAAAATAAATGTAATAGCTCAGTCTCAATTA-TTGGGA  197

seq1  GCCAACTGGGTAAGGGGAAAACTGTAACACACCTTTTAAAGTGCCACTAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTGGGTAAGGGGAAAACTGTAACACACCTTTTAAAGTGCCACTAA  247

seq1  AAATGTCCTGTCCAGCAAGTCCACGCAGCTGTGGGAAGGCAGCAGACACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCTGTCCAGCAAGTCCACGCAGCTGTGGGAAGGCAGCAGACACA  297

seq1  CTGGAACTGAATACACAGGATGCTCAACACTGAAAAGGTCGCTACAGACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTGAATACACAGGATGCTCAACACTGAAAAGGTCGCTACAGACA  347

seq1  AACAGACGTCTGAGGCCCTGCTGCAGGTAGGGGAAGCTAAGAAGTCAGTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACGTCTGAGGCCCTGCTGCAGGTAGGGGAAGCTAAGAAGTCAGTG  397

seq1  TCAACCAGCCTGCATCAGTATAATGAGCTCCTAAGACAAATGACAGCCAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAGCCTGCATCAGTATAATGAGCTCCTAAGACAAATGACAGCCAG  447

seq1  GAGAAATCCAGAGAGAGCGGGTCAGCATGAGGGCCAGACCATAGCTGTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATCCAGAGAGAGCGGGTCAGCATGAGGGCCAGACCATAGCTGTTA  497

seq1  AGGCCTGTGGTGTCTCCTGGCATCACTGGCTTGGTTAAGGGATGACCTGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGTGGTGTCTCCTGGCATCACTGGCTTGGTTAAGGGATGACCTGG  547

seq1  AAGCAGAGGAGCTCTTAAGAAATCTCTCAGCATGTCTTTGTTTCCTTGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGGAGCTCTTAAGAAATCTCTCAGCATGTCTTTGTTTCCTTGTC  597

seq1  TGCCTTCTTGGACTAGGCATGGGACTGTGATTTGGGTTCATACCTTGAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTTGGACTAGGCATGGGACTGTGATTTGGGTTCATACCTTGAAT  647

seq1  GTTGGAGGCTTCACCCCTGACACGGTGCTTCTGGAAGGTGGTGGGACCTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGGCTTCACCCCTGACACGGTGCTTCTGGAAGGTGGTGGGACCTT  697

seq1  CAGGAGGTGGAACTGAATTGGAATAGGGGGTGTCTCCAGTCATTGCAGAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGTGGAACTGAATTGGAATAGGGGGTGTCTCCAGTCATTGCAGAG  747

seq1  GTACCCTTGGAGGAAACCATGACCTGCATCTCTCAGTGAATCTCTCAGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCTTGGAGGAAACCATGACCTGCATCTCTCAGTGAATCTCTCAGCT  797

seq1  GGTGGGCATGAGATTGGTTTGTTTTGCTCCCACGTGCTCACCCCACCCCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCATGAGATTGGTTTGTTTTGCTCCCACGTGCTCACCCCACCCCC  847

seq1  ATCTGTGCACCATCATGATATTAATGCATGCAGTGACTTAATCGCATGAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGCACCATCATGATATTAATGCATGCAGTGACTTAATCGCATGAC  897

seq1  ATAAGGTGGACAAGGAGCTGCCAGGCCAGCCAGAGCAGAGCCGGTTGCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTGGACAAGGAGCTGCCAGGCCAGCCAGAGCAGAGCCGGTTGCTT  947

seq1  TTTATATCCTTTTTTTTTTTCTTCAACAGTTTGAGCCAGGCGACCTCCTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCCTTTTTTTTTTTCTTCAACAGTTTGAGCCAGGCGACCTCCTC  997

seq1  TGTGCCACTATAATCCTTGTTTTTCCCAGAAATCCTAGATCTCCCGGGAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCACTATAATCCTTGTTTTTCCCAGAAATCCTAGATCTCCCGGGAT  1047

seq1  TCTTGGATCTCCAGGGATTCCTGGATCGTCCAGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATCTCCAGGGATTCCTGGATCGTCCAGAATTC  1085

seq1: chr10_77249668_77250741
seq2: B6Ng01-214H19.g_64_1140

seq1  GAATTCCTGTGAAGCTACAACCCTGAGTTTCTCCCAGGGTTTCAGGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGAAGCTACAACCCTGAGTTTCTCCCAGGGTTTCAGGACAA  50

seq1  GGGCATGCCTTATCTCCTCTCCAAGATATGCCTCTTTCTCACAATGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGCCTTATCTCCTCTCCAAGATATGCCTCTTTCTCACAATGAAAC  100

seq1  CCTTTCCAAGGATTTATCAGAGTCACTCTGTGAGCCCCAAGACAGGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAAGGATTTATCAGAGTCACTCTGTGAGCCCCAAGACAGGAAAG  150

seq1  TCCTGGCCCAGACCCAGAGGAGGTAGAACCCGGATCCCAGTATCAGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCCAGACCCAGAGGAGGTAGAACCCGGATCCCAGTATCAGAGCA  200

seq1  TGGAACAAGGGGACAGAAGCTGTGTAAAGACTCCAAGCCTCACAGCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAAGGGGACAGAAGCTGTGTAAAGACTCCAAGCCTCACAGCTGAA  250

seq1  GATACAGAGATAGTGGAAGAGGATAACAGTCACTGTGGAGACATAATCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAGATAGTGGAAGAGGATAACAGTCACTGTGGAGACATAATCGA  300

seq1  TCAGAAGAACTTTTATTAATATGCATTGGTCGAGAGTAGTACAGCTGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAACTTTTATTAATATGCATTGGTCGAGAGTAGTACAGCTGACC  350

seq1  ACAGATGCAGGGTCATCCAGACAGGGAGGGAGGAAGAAGCCAGCTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGCAGGGTCATCCAGACAGGGAGGGAGGAAGAAGCCAGCTCTCCT  400

seq1  GTGACCTGGTGAGGAGGAATCTGCTGGGCCTTCTAAGGGGTCGAGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTGGTGAGGAGGAATCTGCTGGGCCTTCTAAGGGGTCGAGCTACA  450

seq1  CTCAGGTTTCTCGTCAGACTGTACACATCTTTCTTCTGAGCTGTGCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTTTCTCGTCAGACTGTACACATCTTTCTTCTGAGCTGTGCCTCC  500

seq1  ATCAGTAGCAACCACAGGCTGATGGAGGTGTGGTTCTGTGCCCTGCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAGCAACCACAGGCTGATGGAGGTGTGGTTCTGTGCCCTGCTGCC  550

seq1  TTAGTGGGGCCTGGCCCTCAGCAGCTGGACTTCTGTCCACAGCAGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGGGCCTGGCCCTCAGCAGCTGGACTTCTGTCCACAGCAGGCCTG  600

seq1  TCTGCAGCAGGCAGGGCGGCACAGCAGGGACACAGAGGAGGTTGGGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGCAGGCAGGGCGGCACAGCAGGGACACAGAGGAGGTTGGGCCAC  650

seq1  AGCAGCTGGGCTGGCAGGAGGAGGCACAGCAGGAGGAGGTGGGCACACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTGGGCTGGCAGGAGGAGGCACAGCAGGAGGAGGTGGGCACACAG  700

seq1  CAGGCAGGTCTGCACACTGGGCGACACAGCAGGGACAGGCTGGAGCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGTCTGCACACTGGGCGACACAGCAGGGACAGGCTGGAGCAGGG  750

seq1  CTTGCAGCACACAGGAGCACAGCAGGAGGGCTGGCAGCAGGAGGAGGAGC  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTGCAGCACACAGGAGCACAGCA-GAGGGCTGGCAGCAGGAGGAGGAGC  799

seq1  CAGAGCAGATGGGTGTGCAGCACACAGGCTTGCAGCAGATAGGCACACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGATGGGTGTGCAGCACACAGGCTTGCAGCAGATAGGCACACAG  849

seq1  CAGGGGGATTGACAGCATGAGGACTGGCAGCTAGACTGCTGGCAGCATGG  900
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GGGGATTGACAGCATGAGGACTGGCAGCTAGACTGCTGGCAGCATGG  898

seq1  TCCAGAGCAGATGGGTGTGCAGCAGACAGGCTTGCAGCAAAGGGTCA-CA  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCAGAGCAGATGGGTGTGCAGCAGACAGGCTTGCAGCAAAGGGTCACCA  948

seq1  CAGCAGGATGGCTGGCAGGGGGAGCAGGTGCAGCAAGCTGGCTGGCAGCT  999
      ||||||||||||||||||| ||||||| |||||| |||||||||||||||
seq2  CAGCAGGATGGCTGGCAGGTGGAGCAGTTGCAGCCAGCTGGCTGGCAGCT  998

seq1  AGACTG-CTGGCAGCATGAGGGTGTGCAGCAGGAAGATTGGCAGCAGGGG  1048
      |||||| ||||||||||   ||||||||||  ||||||| ||||||||||
seq2  AGACTGCCTGGCAGCATTGAGGTGTGCAGCCAGAAGATTTGCAGCAGGGG  1048

seq1  CTGGACA-CACAG-CTCACT-GGGGTGCA  1074
      || |||| ||||| |||||| ||||||||
seq2  CTTGACACCACAGCCTCACTGGGGGTGCA  1077