MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-216D02
Chromosome	10 (Build37)
Map Location	49,331,094 - 49,332,200
singlet/doublet	singlet
Overlap gene	Grik2
Upstream gene	LOC546562, LOC100041689
Downstream gene	LOC629652, Ascc3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC546562 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Grik2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14806 MGI:95815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629652 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ascc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77987 MGI:1925237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 65 ESTs, 5 Proteins

name	LOC100041689 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260725 GeneID:100041689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to translation initiation factor eIF2C transcript_id : XM_001476846.1

name	Grik2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754073 GeneID:14806 MGI:95815
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, kainate 2 (beta 2) transcript_id : NM_010349.1

name	Ascc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387974 GeneID:77987 MGI:1925237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 65 ESTs, 5 Proteins product : activating signal cointegrator 1 complex subunit 3, transcript variant 1 transcript_id : XM_125617.7

name	LOC100041689 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260726 GeneID:100041689
definition	codon_start : 1 product : similar to translation initiation factor eIF2C protein_id : XP_001476896.1

name	Grik2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754074 CCDS:CCDS23830.1 GeneID:14806 MGI:95815
definition	GO_component : GO:0008328 - ionotropic glutamate receptor complex [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA]; GO:0045202 - synapse [Evidence TAS] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IMP]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0015277 - kainate selective glutamate receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glutamate receptor, ionotropic, kainate 2 (beta 2) protein_id : NP_034479.1

name	Ascc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932285 GeneID:77987 MGI:1925237
definition	codon_start : 1 product : activating signal cointegrator 1 complex subunit 3 isoform 1 protein_id : XP_125617.5

name	LOC546562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546562
definition	number : 1 pseudo : _no_value

name	LOC546562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546562
definition	number : 2 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 1 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 2 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 3 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 4 pseudo : _no_value

clone name	MSMg01-353A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145O02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-460G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498B15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-123I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-364M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188E15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243D21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-216D02.b	B6Ng01-216D02.g
ACC	GA032945	GA032946
length	1,203	1,095
definition	B6Ng01-216D02.b	B6Ng01-216D02.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcacataaaaccagagacactgaaacttatagaggagaaagtgggg aaaagccttgaagatatgggcacatgggaaaaattcctgaatagaacagc aatggcttgtgctgtaagatcgagaattgacaaatgggacctcatgaaac tccaaagcttctgcaaggcaaaagacaccgtcaataagacaaaaagacca ccaacaaattgggaaaggatctttacctatcctaaatcagataggggact aatattcaacatctataaagaactcaagaaggtggacttcagaaaatcaa ataaccccattaaaaaatggggctcagaactgaacaaagaattctcacct aggaataccgaatggcagagaagcacctgaaaaaatgttcaacatcctta atcatcagggaaatgcaaatcaaaacaaccctgagattccacctcacacc agtcagaatggctaagatcaaaaattcaggtgacagcagatgctggcaag gatgtggagaaagaggaatactcctccattgttggtgggattgtaggctt gtacaaccactctggaaatcagtctggcagttcctcagaaaattggacat agtactaccggaggatccagcaatacctctcctgggcatatatccaaaag atgtcctaaccagtaagaaggacacatgctccactatgttcatagcagcc ttatttataatagccagaagctggaaagaacccagatgcccctcaacaga ggaatggatacaaaaaaatgtggtacatttacagaatggagtactactca gctattaaaaagaatgaatttatgaaattcctaggcaaatggatggacct ggagggcatcatcctgagtgaggtaacacattcacaaaggaactcacaca atatgtactcactgataagtggatattagcccaaacctaggatacccaag atataagatacatttgctaaacacatgaactcaaaaagaatgaagactga agtgtggacactatgccccctcctagattgggaacaaaacacccatggga aggagtacagagacaagttgagcctgagacgaagatgaacatctagagac tggcatatcagggatccacccataattcagctccaatgctgaaccattgc taataaccctagccagattggtgaaagatacctcccgagaaatgattgac gct	gaattccaacgtaagatagctggtttgcttaggactatagattctgtgcc cagcccttggttaatctggttgatttttaaatattaagattgtctggtat tttttcatctgtgatgactcaggtgggcaagagggaaagtgtgtaccctt ggggtggtcattagcagttcctggactgtgtgtaagtgaaacgtgattat tagttccaggtgtccccaagaagtgaatgcaggtgggggctgttctcaga gcttagtaacgatctctagaaagcattggctagcccatgggggctgacta gctggtggtttgctactgattccagagctgagcagaagcaaacttacata tttttaaaatcacaagcaacaaagtaacctatcttgtttgactttctcga actttttgagatcctctggtggtcttcccctttcatatcggatccatatc actctggaaggggtccagagccttttcttctttcctgtcaacacaaatac agagcatctctcccaaaatagcatgtctgtggtctagtaaccagaattca ttaagggtatagcttgacctctctcccagaggaattttaatatcaccacc aaactcatagctacattcatttttataattaaaataaaattcaaagcaat gaaaacaatctaaacaaatctaatttgttgagacagtgtttctcctgtct tctgctccaacctatgtgagatcatagcctaaattatttttacatctatg caaacgtgaaccctttcctcctatggagtttaatatctctgtgggtgcat attgtagtatatccctttctttctctatgtaataatcctcaaggcctaag tttctactatctgatataggctaggcttctgacctcctgcttttgaccta tttttataaagatcaaaagcctcaatattatatatctctgtttttatatt gtttttaaggagtttcatctgctctctgtctctcaatgtcttcctcctag cactcatggaccagtcagctgttgcacagcagtctcagccctttagttta agtctctctgcagcagctggttctttattagttcatggtgctgga
quality values	Open. Hide. 58 29 21 28 58 39 26 47 35 62 62 62 62 62 62 47 37 62 62 54 41 42 56 49 62 62 47 62 62 62 62 62 18 19 8 9 11 13 9 18 11 18 23 18 23 11 56 50 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 24 30 23 23 18 23 36 46 28 32 28 43 43 38 49 49 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 56 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 54 49 49 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 49 62 62 62 62 62 58 54 58 58 58 58 58 58 58 58 58 49 58 54 58 58 58 58 58 41 43 58 58 58 58 58 58 54 54 58 58 58 42 38 58 58 58 58 52 58 54 58 58 58 58 54 52 52 58 58 58 52 58 58 58 58 58 58 58 58 58 58 51 51 58 58 58 58 58 49 50 51 51 58 58 51 58 58 53 52 46 58 58 58 42 41 58 58 58 58 37 51 58 54 52 58 58 58 54 51 58 58 51 58 44 18 58 46 46 51 53 42 51 51 52 54 48 50 49 58 58 53 53 46 58 51 58 58 58 50 51 53 54 53 54 58 49 39 21 58 49 58 52 51 32 58 40 52 58 41 51 50 50 49 43 49 31 46 51 50 54 51 30 58 40 37 50 52 37 51 54 53 53 45 51 38 49 49 45 52 51 52 50 45 38 52 53 41 39 39 37 49 44 51 52 42 40 54 35 31 45 41 51 45 53 39 51 51 40 42 54 54 37 53 52 52 54 52 54 47 31 33 42 32 54 54 37 31 49 30 34 25 39 33 46 53 37 41 45 44 29 27 53 17 32 52 47 36 53 40 35 32 35 53 29 49 51 53 52 49 51 32 52 31 52 53 35 35 34 35 42 53 53 29 47 20 52 47 32 31 42 43 41 24 31 32 31 36 35 37 45 36 28 24 35 38 31 31 30 31 51 46 46 42 29 32 22 31 31 26 31 31 51 33 23 31 30 33 46 25 46 12 12 42 26 32 17 43 31 30 46 31 31 34 30 29 31 30 46 26 13 25 24 31 31 30 28 46 29 24 24 36 32 32 38 42 37 31 41 31 24 31 31 31 19 38 19 28 24 28 23 32 24 30 35 28 27 35 19 46 11 11 27 23 33 23 31 31 19 31 31 19 5 20 30 25 24 31 25 24 23 32 23 13 30 31 38 33 33 14 24 14 10 21 42 29 21 24 37 19 23 32 37 47 26 25 41 28 9 13 23 9 21 10 23 16 19 17 37 18 12 20 14 21 11 14 25 14 33 20 17 6 22 17 43 11 37 26 25 32 33 21 43 21 19 13 30 15 27 25 23 13 13 29 32 12 19 40 37 30 27 22 24 20 32 30 20 15 23 20 28 28 13 18 16 15 28 20 28 24 28 16 17 27 27 15 19 17 14 21 17 28 9 18 10 18 25 17 11 19 4 7 20 28 13 16 11 7 10 34 30 11 9 9 16 28 18 7 5 7 22 8 16 4 15 7 28 6 24 5 7 5 7 27 6 6 5 7 18 10 20 11 3 2 4 7 6 23 13 16 5 21 20 6 16 9 3 2 11 24 6 5 18 11 13 10 6 13 10 13 5 21 16 7 8 7 24 5 16 5 11 21 9 8 28 17 4 8 11 6 7 23 17 9 3 7 11 7 4 7 5 19 14 4 3 3 6 7 9 1 5 13 8 11 5 6 10 16 4 3 4 8 11 4 4 4 6 5 4 5 4 6 11 21 4 5 4 22 10 8 5 2 4 4 5 4 7 4 6 8 4 3 5 13 5 4 24 19 5 7 15 7 5 30 5 7 11 4 4 2 1 4 5 1 1 1	Open. Hide. 49 49 51 44 62 62 59 20 62 62 45 43 13 13 13 21 17 18 23 23 27 32 32 27 43 43 49 59 62 62 62 54 54 59 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 56 48 43 36 36 46 38 48 48 43 34 54 56 45 48 54 54 59 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 42 58 58 58 58 58 58 58 58 58 58 58 58 41 52 58 58 58 54 58 54 58 58 58 58 58 58 58 58 54 58 58 54 58 54 47 58 49 54 54 54 58 54 58 58 54 46 58 54 47 54 54 54 44 36 49 58 52 54 54 58 58 58 58 43 38 44 48 58 58 58 58 58 54 49 58 48 41 52 51 25 58 49 24 30 58 58 49 41 58 51 51 58 51 46 51 51 47 58 42 39 58 58 47 58 54 46 54 53 50 58 58 37 54 50 51 58 53 50 51 58 58 58 49 53 53 37 58 39 37 42 58 58 58 50 46 58 58 40 39 58 39 31 58 58 53 52 49 51 51 58 36 58 49 37 44 16 58 52 53 53 50 58 54 51 50 58 51 53 53 53 50 53 31 58 58 51 50 41 40 51 38 52 32 37 40 30 54 42 58 41 41 49 39 58 41 54 35 52 37 34 45 34 38 33 46 42 52 31 46 29 42 31 51 49 47 35 46 49 26 33 31 37 32 52 40 31 49 54 39 37 54 51 39 45 34 25 54 54 54 53 32 39 23 53 39 33 39 42 45 42 35 54 34 40 27 51 52 52 26 22 54 54 23 54 19 31 33 33 37 51 29 37 31 46 41 53 32 40 52 31 27 33 31 32 35 32 32 42 31 51 25 33 46 32 32 32 29 28 45 45 53 32 40 17 53 27 30 32 31 31 37 38 51 31 46 47 14 18 33 47 29 32 31 42 31 31 35 42 10 6 7 22 23 32 31 31 32 31 30 20 12 27 24 29 30 30 25 32 26 31 47 37 31 15 25 34 31 31 31 36 36 31 42 19 21 31 22 16 34 32 26 17 18 27 29 42 36 31 31 28 37 27 29 24 23 31 23 29 29 31 48 48 31 32 28 21 24 31 31 32 48 48 48 38 30 31 23 46 25 15 26 29 32 28 48 46 35 25 30 30 32 38 28 21 13 9 29 24 9 22 31 29 23 33 38 37 38 18 26 22 48 48 48 33 15 22 25 31 24 12 13 43 44 48 17 17 18 25 7 43 12 24 36 33 17 16 17 21 21 33 17 29 32 15 32 24 34 19 32 25 20 10 16 20 17 31 34 21 22 19 11 32 21 22 18 34 18 33 10 15 18 16 26 16 10 14 16 21 25 3 7 15 14 14 28 15 3 4 3 4 7 12 10 16 11 12 16 8 7 14 3 3 5 7 16 19 6 22 40 30 6 28 7 7 3 7 34 7 18 7 16 4 5 12 19 12 8 7 18 4 6 20 23 20 10 21 18 4 3 11 15 18 7 17 2 3 1 8 16 5 17 9 11 5 6 4 11 7 9 22 13 14 4 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_49331094_49332200
seq2: B6Ng01-216D02.g_69_1163 (reverse)

seq1  TCCAGCA-CATGAAACTAAACCAAAAGAACACAGCTGCTGCCAGAGAGAC  49
      ||||||| |||| ||||||    ||||||| ||||||||| |||||||| 
seq2  TCCAGCACCATG-AACTAA---TAAAGAAC-CAGCTGCTG-CAGAGAGA-  43

seq1  CTTAAACTAAGGGGCTGAGAACTGCTGTGCAAACAGGCTGACTGGTTCCA  99
      |||||||||| |||||||| |||||||||| |||| ||||||||| ||||
seq2  CTTAAACTAAAGGGCTGAG-ACTGCTGTGC-AACA-GCTGACTGG-TCCA  89

seq1  TGAGTGCTAGGAGGAAGACATTGAGAGACAGAGAGCAGATGAAACTTCCT  149
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGAGTGCTAGGAGGAAGACATTGAGAGACAGAGAGCAGATGAAAC-TCCT  138

seq1  TAAAAACAAATAATAAAAACAGAGATATATAAATATTGAGGCTTTTGATC  199
      |||||||||   |||||||||||||||||| |||||||||||||||||||
seq2  TAAAAACAA--TATAAAAACAGAGATATAT-AATATTGAGGCTTTTGATC  185

seq1  TTTATAAAAATAGGTCAAAAGCAGGAGGTCAGAAGCCTAGCCTATATCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAAATAGGTCAAAAGCAGGAGGTCAGAAGCCTAGCCTATATCAG  235

seq1  ATAGTAGAAACTTAGGCCTTGAGGATTA-TACATAGAGAAAGAAAGGGAT  298
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAGTAGAAACTTAGGCCTTGAGGATTATTACATAGAGAAAGAAAGGGAT  285

seq1  ATACTACAATATGCACCCACAGAGATATTAAACTCCATAGGAGG-AAGGG  347
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATACTACAATATGCACCCACAGAGATATTAAACTCCATAGGAGGAAAGGG  335

seq1  TTCACGTTTGCATAGATGTAAAAATAATTTAGGCTATGATCTCACATAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGTTTGCATAGATGTAAAAATAATTTAGGCTATGATCTCACATAGG  385

seq1  TTGGAGCAGAAGACAGGAGAAACACTGTCTCAACAAATTAGATTTGTTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAGAAGACAGGAGAAACACTGTCTCAACAAATTAGATTTGTTTA  435

seq1  GATTGTTTTCATTGCTTTGAATTTTATTTTAATTATAAAAATGAATGTAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTTCATTGCTTTGAATTTTATTTTAATTATAAAAATGAATGTAG  485

seq1  CTATGAGTTTGGTGGTGATATTAAAATTCCTCTGGGAGAGAGGTCAAGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTTTGGTGGTGATATTAAAATTCCTCTGGGAGAGAGGTCAAGCT  535

seq1  ATACCCTTAATGAATTCTGGTTACTAGACCACAGACATGCTATTTTGGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTTAATGAATTCTGGTTACTAGACCACAGACATGCTATTTTGGGA  585

seq1  GAGATGCTCTGTATTTGTGTTGACAGGAAAGAAGAAAAGGCTCTGGACCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCTCTGTATTTGTGTTGACAGGAAAGAAGAAAAGGCTCTGGACCC  635

seq1  CTTCCAGAGTGATATGGATCCGATATGAAAGGGGAAGACCACCAGAGGAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGTGATATGGATCCGATATGAAAGGGGAAGACCACCAGAGGAT  685

seq1  CTCAAAAAGTTCGAGAAAGTCAAACAAGATAGGTTACTTTGTTGCTTGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAAGTTCGAGAAAGTCAAACAAGATAGGTTACTTTGTTGCTTGTG  735

seq1  ATTTTAAAAATATGTAAGTTTGCTTCTGCTCAGCTCTGGAATCAGTAGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAATATGTAAGTTTGCTTCTGCTCAGCTCTGGAATCAGTAGCA  785

seq1  AACCACCAGCTAGTCAGCCCCCATGGGCTAGCCAATGCTTTCTAGAGATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAGCTAGTCAGCCCCCATGGGCTAGCCAATGCTTTCTAGAGATC  835

seq1  GTTACTAAGCTCTGAGAACAGCCCCCACCTGCATTCACTTCTTGGGGACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAAGCTCTGAGAACAGCCCCCACCTGCATTCACTTCTTGGGGACA  885

seq1  CCTGGAACTAATAATCACGTTTCACTTACACACAGTCCAGGAACTGCTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTAATAATCACGTTTCACTTACACACAGTCCAGGAACTGCTAA  935

seq1  TGACCACCCCAAGGGTACACACTTTCCCTCTTGCCCACCTGAGTCATCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACCCCAAGGGTACACACTTTCCCTCTTGCCCACCTGAGTCATCAC  985

seq1  AGATGAAAAAATACCAGACAATCTTAATATTTAAAAATCAACCAGATTAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAAAAATACCAGACAATCTTAATATTTAAAAATCAACCAGATTAA  1035

seq1  CCAAGGGCTGGGCACAGAATCTATAGTCCTAAGCAAACCAGCTATCTTAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGCTGGGCACAGAATCTATAGTCCTAAGCAAACCAGCTATCTTAC  1085

seq1  GTTGGAATTC  1107
      ||||||||||
seq2  GTTGGAATTC  1095

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information