BAC Information

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BAC

Clone NameB6Ng01-217D21
Chromosome17 (Build37)10 (Build37)
Map Location 94,372,229 - 94,373,34983,372,527 - 83,372,581
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
Downstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik, LOC100043754, LOC668888, LOC100038868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217D21.bB6Ng01-217D21.g
ACCGA033708GA033709
length1,10666
definitionB6Ng01-217D21.b B6Ng01-217D21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,372,229 - 94,373,349)(83,372,527 - 83,372,581)
sequence
gaattcacatgttaaagtctgagacactcatggtctcccatgccttggaa
gaaatcaaacaattgtggctcaccacagagtaaagaatctaatatttgga
gaaactgagccagtcagcatttgtatattggcaaatcatgttttacttaa
gaatagatgtaatagataagaaagtaaagcagaaaaattagaaatgtggt
taccatcgatcaaggggcaaggcgatattgtagctccttcgatggcatcc
agtggctaccacagcatagactgtagtcaaaattttttctcaggctagca
aaatcattctggaaaaaaaaagtgctcacttgtaaacataactagaattt
atattctccttttcccttaaatcctcaataagtagaacaaaaccaaatcc
tgtatgttatctttaatgtagtaaattaatttagtggcaataaaaccagt
tctgagagttttaagttatggtgtttacaacaattttctttcccaaagct
ggaaattaacatcattgacatacctctcaacctctaatacggctaaaata
ttctctgttcaccaatatgtttctaaaacaatattgagtgtgcttctttg
acaacctgagattaatccccagaacccatggtggaaagagagaaacaagt
cctgaaagttttcccaagatgaattcttgtcttgagtcatgctctgatcc
acatccatacacatgaatcatatatacacacacccaataagaataacaat
agtgacatatacaataaaaacattaacttcttctcagcagagattaattt
ttttttttgaaaatgaaagtgacttattccaaagttgcatggctaccctg
caatttagctacaaggtctgttctgttgcacccttcaactcggatgtgta
tccctagtcattaattactcttggcctctctttctccattaggtattttc
tcagacagataggaaagacagacagacagacagacaggcagacagacaga
gatgatgatagatatcctggagatcttcacatgtatatcttcatgaaact
ttattaaactaaattgcattagctgtttaattactcctagctataccttt
gtcatt
agaaaagtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgt
gcgtgttgtgagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_94372229_94373349
seq2: B6Ng01-217D21.b_48_1153

seq1  GAATTCACATGTTAAAGTCTGAGACACTCATGGTCTCCCATGCCTTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGTTAAAGTCTGAGACACTCATGGTCTCCCATGCCTTGGAA  50

seq1  GAAATCAAACAATTGTGGCTCACCACAGAGTAAAGAATCTAATATTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAAACAATTGTGGCTCACCACAGAGTAAAGAATCTAATATTTGGA  100

seq1  GAAACTGAGCCAGTCAGCATTTGTATATTGGCAAATCATGTTTTACTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGAGCCAGTCAGCATTTGTATATTGGCAAATCATGTTTTACTTAA  150

seq1  GAATAGATGTAATAGATAAGAAAGTAAAGCAGAAAAATTAGAAATGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGATGTAATAGATAAGAAAGTAAAGCAGAAAAATTAGAAATGTGGT  200

seq1  TACCATCGATCAAGGGGCAAGGCGATATTGTAGCTCCTTCGATGGCATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCGATCAAGGGGCAAGGCGATATTGTAGCTCCTTCGATGGCATCC  250

seq1  AGTGGCTACCACAGCATAGACTGTAGTCAAAATTTTTTCTCAGGCTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTACCACAGCATAGACTGTAGTCAAAATTTTTTCTCAGGCTAGCA  300

seq1  AAATCATTCTGGAAAAAAAAAGTGCTCACTTGTAAACATAACTAGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTCTGGAAAAAAAAAGTGCTCACTTGTAAACATAACTAGAATTT  350

seq1  ATATTCTCCTTTTCCCTTAAATCCTCAATAAGTAGAACAAAACCAAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTCCTTTTCCCTTAAATCCTCAATAAGTAGAACAAAACCAAATCC  400

seq1  TGTATGTTATCTTTAATGTAGTAAATTAATTTAGTGGCAATAAAACCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTATCTTTAATGTAGTAAATTAATTTAGTGGCAATAAAACCAGT  450

seq1  TCTGAGAGTTTTAAGTTATGGTGTTTACAACAATTTTCTTTCCCAAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGTTTTAAGTTATGGTGTTTACAACAATTTTCTTTCCCAAAGCT  500

seq1  GGAAATTAACATCATTGACATACCTCTCAACCTCTAATACGGCTAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTAACATCATTGACATACCTCTCAACCTCTAATACGGCTAAAATA  550

seq1  TTCTCTGTTCACCAATATGTTTCTAAAACAATATTGAGTGTGCTTCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTTCACCAATATGTTTCTAAAACAATATTGAGTGTGCTTCTTTG  600

seq1  ACAACCTGAGATTAATCCCCAGAACCCATGGTGGAAAGAGAGAAACAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTGAGATTAATCCCCAGAACCCATGGTGGAAAGAGAGAAACAAGT  650

seq1  CCTGAAAGTTTTCCCAAGATGAATTCTTGTCTTGAGTCATGCTCTGATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAGTTTTCCCAAGATGAATTCTTGTCTTGAGTCATGCTCTGATCC  700

seq1  ACATCCATACACATGAATCATATATACACACA-CCAATAAGAATAACAAT  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACATCCATACACATGAATCATATATACACACACCCAATAAGAATAACAAT  750

seq1  AGTGACATATACAATAAAAACATTAACTTCTTCTCAGCAGAGATTAA-TT  798
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTGACATATACAATAAAAACATTAACTTCTTCTCAGCAGAGATTAATTT  800

seq1  TTTTTTTTGAAAATGAAAGTGACTTATTCCAAAGTTGCATGGCTACCCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGAAAATGAAAGTGACTTATTCCAAAGTTGCATGGCTACCCTG  850

seq1  CAATTTAGCTACAAGGTCTGTTCTGTTGCACCCTTCAACTCGGATGTGTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAGCTACAAGGTCTGTTCTGTTGCACCCTTCAACTCGGATGTGTA  900

seq1  TCCCTAGTCATTAATTACTCTT-GCCTCTC-TTCTCCATTAGGTATTTTC  946
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  TCCCTAGTCATTAATTACTCTTGGCCTCTCTTTCTCCATTAGGTATTTTC  950

seq1  TCAGACAGATA-GAAAGACAGACAGACAGACAGACAGGCAGACAGACAGA  995
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  TCAGACAGATAGGAAAGACAGACAGACAGACAGACAGGCAGACAGACAG-  999

seq1  AGATGAATGATAGATATTCCTTGAGAATCTCACATGTTATATTCCTTCCA  1045
      ||||| |||||||||| |||| ||||   ||||||| |||||  ||| ||
seq2  AGATG-ATGATAGATA-TCCTGGAGATCTTCACATG-TATAT--CTT-CA  1043

seq1  TGAAAACTTTATTTAAAACTAAAATTTGCCAATTTTAGCTGTTTATATTA  1095
      || ||||||||||  ||||||||  ||||     ||||||||||| ||||
seq2  TG-AAACTTTATT--AAACTAAA--TTGC----ATTAGCTGTTTA-ATTA  1083

seq1  CTTCCCTAAGCTATAACTTTGTCATT  1121
      ||  ||| ||||||| ||||||||||
seq2  CT--CCT-AGCTATACCTTTGTCATT  1106

seq1: chr10_83372527_83372581
seq2: B6Ng01-217D21.g_81_136 (reverse)

seq1  CTCTCTCAC-ACACACACACACACACATACACACACACACACACACACAC  49
      ||||||||| |||| |||||||||||||||||||||||||||||||||||
seq2  CTCTCTCACAACACGCACACACACACATACACACACACACACACACACAC  50

seq1  ACACAC  55
      ||||||
seq2  ACACAC  56