BAC Information

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BAC

Clone NameB6Ng01-223M06
Chromosome10 (Build37)
Map Location 125,783,939 - 125,941,827
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994, Lrig3, LOC100043547
Downstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223M06.bB6Ng01-223M06.g
ACCGA038415GA038416
length782330
definitionB6Ng01-223M06.b B6Ng01-223M06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,783,939 - 125,784,720)(125,941,498 - 125,941,827)
sequence
gaattctcattactatattctgggaacttgcatgatgacttagtcattat
ggtcaaaggatcctcttcaggtcctgccaggtcatcgatttgtccatatg
tacctcctgttaggtttggttttctttgattgatttgttggtggtggctt
aggacactttgtataaggtagatgcatccccgttactaatgagtatttgt
taatttgtttaggcattattatttttattattattattaccatgttggcc
tcaaacttcctctgcctgagaaggtagatatgtgccatcaagtgtggctc
cagtctgtttctggtatctgcttgtgaatttgttcagatatgcaagctct
atgtcttggttccataaagactttctcacttaatgtactagaagagtcat
tgcccctttggttaattgtggagataaaccttttttgtctcctttggtgc
gcttttattttagaaagagagacatgtttgactcatactgtttgacagga
gagtttccacctgatgagtataaaccgaaagtagatgttccctaaaggat
atggctgcacttcttttggtaagatcttggatgtactggcttcggagcct
cgttgtggtctaattccatgaccctgtcgaatgctggacgatgtagtgat
tagcgtagattatcagtaattacctattgatagcattactgaataagtga
cagtttggattacaagttcaaagttcgagtgaggaaaaatactgttctgc
ctggaagtcaggagtcacagtcatatgatgca
tcaaacatgcctgaatttatggaaaactactggtgatcttaagagggaaa
cggattggttgattgctgtggttagcccatctgtgagaggctcctgttct
cccacagagtctgctataagcacttcctactactactagggatggctccc
aggtccttgagaaatgcattcctgggctcgagactggtgtcttagagtgt
aggagagagagagagggagagagagagagaatatgtgtaaggtttttaag
aggaatcctctaagaaaaatgaccaggatccataagaagcctgaccaaag
ttgaatcaacccatagagcataggtagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_125783939_125784720
seq2: B6Ng01-223M06.b_43_824

seq1  GAATTCTCATTACTATATTCTGGGAACTTGCATGATGACTTAGTCATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTACTATATTCTGGGAACTTGCATGATGACTTAGTCATTAT  50

seq1  GGTCAAAGGATCCTCTTCAGGTCCTGCCAGGTCATCGATTTGTCCATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAGGATCCTCTTCAGGTCCTGCCAGGTCATCGATTTGTCCATATG  100

seq1  TACCTCCTGTTAGGTTTGGTTTTCTTTGATTGATTTGTTGGTGGTGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTGTTAGGTTTGGTTTTCTTTGATTGATTTGTTGGTGGTGGCTT  150

seq1  AGGACACTTTGTATAAGGTAGATGCATCCCCGTTACTAATGAGTATTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACTTTGTATAAGGTAGATGCATCCCCGTTACTAATGAGTATTTGT  200

seq1  TAATTTGTTTAGGCATTATTATTTTTATTATTATTATTACCATGTTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTTTAGGCATTATTATTTTTATTATTATTATTACCATGTTGGCC  250

seq1  TCAAACTTCCTCTGCCTGAGAAGGTAGATATGTGCCATCAAGTGTGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTCCTCTGCCTGAGAAGGTAGATATGTGCCATCAAGTGTGGCTC  300

seq1  CAGTCTGTTTCTGGTATCTGCTTGTGAATTTGTTCAGATATGCAAGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTTTCTGGTATCTGCTTGTGAATTTGTTCAGATATGCAAGCTCT  350

seq1  ATGTCTTGGTTCCATAAAGACTTTCTCACTTAATGTACTAGAAGAGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTGGTTCCATAAAGACTTTCTCACTTAATGTACTAGAAGAGTCAT  400

seq1  TGCCCCTTTGGTTAATTGTGGAGATAAACCTTTTTTGTCTCCTTTGGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTTTGGTTAATTGTGGAGATAAACCTTTTTTGTCTCCTTTGGTGC  450

seq1  GCTTTTATTTTAGAAAGAGAGACATGTTTGACTCATACTGTTTGACAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATTTTAGAAAGAGAGACATGTTTGACTCATACTGTTTGACAGGA  500

seq1  GAGTTTCCACCTGATGAGTATAAACCGAAAGTAGATGTTCCCTAAAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCCACCTGATGAGTATAAACCGAAAGTAGATGTTCCCTAAAGGAT  550

seq1  ATGGCTGCACTTCTTTTGGTAAGATCTTGGATGTACTGGCTTCGGAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGCACTTCTTTTGGTAAGATCTTGGATGTACTGGCTTCGGAGCCT  600

seq1  CGTTGTGGTCTAATTCCATGACCCTGTCGAATGCTGGACGATGTAGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTGGTCTAATTCCATGACCCTGTCGAATGCTGGACGATGTAGTGAT  650

seq1  TAGCGTAGATTATCAGTAATTACCTATTGATAGCATTACTGAATAAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGTAGATTATCAGTAATTACCTATTGATAGCATTACTGAATAAGTGA  700

seq1  CAGTTTGGATTACAAGTTCAAAGTTCGAGTGAGGAAAAATACTGTTCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGGATTACAAGTTCAAAGTTCGAGTGAGGAAAAATACTGTTCTGC  750

seq1  CTGGAAGTCAGGAGTCACAGTCATATGATGCA  782
      ||||||||||||||||||||||||||||||||
seq2  CTGGAAGTCAGGAGTCACAGTCATATGATGCA  782

seq1: chr10_125941498_125941827
seq2: B6Ng01-223M06.g_76_405 (reverse)

seq1  AGTCTACCTATGCTCTATGGGTTGATTCAACTTTGGTCAGGCTTCTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTCTACCTATGCTCTATGGGTTGATTCAACTTTGGTCAGGCTTCTTATG  50

seq1  GATCCTGGTCATTTTTCTTAGAGGATTCCTCTTAAAAACCTTACACATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGGTCATTTTTCTTAGAGGATTCCTCTTAAAAACCTTACACATAT  100

seq1  TCTCTCTCTCTCTCCCTCTCTCTCTCTCCTACACTCTAAGACACCAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCCCTCTCTCTCTCTCCTACACTCTAAGACACCAGTCT  150

seq1  CGAGCCCAGGAATGCATTTCTCAAGGACCTGGGAGCCATCCCTAGTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCAGGAATGCATTTCTCAAGGACCTGGGAGCCATCCCTAGTAGTA  200

seq1  GTAGGAAGTGCTTATAGCAGACTCTGTGGGAGAACAGGAGCCTCTCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAGTGCTTATAGCAGACTCTGTGGGAGAACAGGAGCCTCTCACAG  250

seq1  ATGGGCTAACCACAGCAATCAACCAATCCGTTTCCCTCTTAAGATCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTAACCACAGCAATCAACCAATCCGTTTCCCTCTTAAGATCACCA  300

seq1  GTAGTTTTCCATAAATTCAGGCATGTTTGA  330
      ||||||||||||||||||||||||||||||
seq2  GTAGTTTTCCATAAATTCAGGCATGTTTGA  330