BAC Information

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BAC

Clone NameB6Ng01-228K05
Chromosome10 (Build37)
Map Location 100,852,504 - 100,853,604
singlet/doubletsinglet
Overlap genenone
Upstream geneEG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream geneMgat4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228K05.bB6Ng01-228K05.g
ACCGA042002GA042003
length1,2231,124
definitionB6Ng01-228K05.b B6Ng01-228K05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgcgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactcagcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggagatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaacaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
cttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttc
tggaggcactcagcgctatgagtttccctcttagaaatgctttcattgtg
tcccatagtttgggtacgttgtggcttcattttcataaactctaaaatgt
cttatttcttttctttaatctcccttgacagtatcaatggagagaggagt
ggtatcaggtacacggtgatgtgccttcaatactatagtgtacgaagata
cagtcctaggccatgtgatctgtatagcatcctaggacattcaatacttt
gtatcatatgaatgggcccgcgt
gaattccatgaaaatgttaaatgccaaatgtggctttaagggaaaagtta
tgtcacgatggtgtttgaaattgatgcttgaaaatgctattcaataatga
ataaagggaaaatggttgataattcagatgagagaaactttggtggttag
aacattgagtttcctgaataatcaatgcttttctattattcacaaaataa
tacttagtagacactgcctatttgtgtctaggatctgagaagttattctg
caagaaatatctaggcccagaatttataacagatccctttagcaagattt
tgtgtaattcagttagtatgtttgtttagaaagtaagaagggctagagtt
cacctactatactccatagggaaaataatacacacacacacacacacaca
cacacacacacacacacacatgacagagagagagagagagagagagagag
agagagagagagagagagaggcagagagagagagagaaacagagagagag
agaagcagagagagagagagaaacagagagacagaaacagagagacagaa
acagagagacagaaacagagagagacagagagaacacacagaaagactat
acatacaaacacacacatacacaaaaaaaaatgacaaacacacagagaca
ggggaacacaagggagagaaacacacacacacacacacacacacacacac
acacacacgaagaaggaggaaaaggaaaagaaaaatacaaacctatgtaa
actaaacagctctttaataggattaatttcaaatgactcaaactcccagc
ccttgcttggaaaaaacaatgtgcatgtgtctagaagagccagcccttcc
cacccttcctccattgctcctttaacaatgttcttctctatcaactttca
ttgtcaagtagctgtgcattatacttgttttgtttttctttaacacattt
ccaatttcaaaaaccattcaacagatcttctttttctgcatttcaaaatt
gtttcttcagattgatttttattatgtcctttctggtattccccataaca
cattgcaatttatttatgccactatattatttagaattttgcatttttta
ttctagatttcgagtatttaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100852504_100853604
seq2: B6Ng01-228K05.g_65_1188

seq1  GAATTCCATGAAAATGTTAAATGCCAAATGTGGCTTTAAGGGAAAAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAAAATGTTAAATGCCAAATGTGGCTTTAAGGGAAAAGTTA  50

seq1  TGTCACGATGGTGTTTGAAATTGATGCTTGAAAATGCTATTCAATAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACGATGGTGTTTGAAATTGATGCTTGAAAATGCTATTCAATAATGA  100

seq1  ATAAAGGGAAAATGGTTGATAATTCAGATGAGAGAAACTTTGGTGGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGGAAAATGGTTGATAATTCAGATGAGAGAAACTTTGGTGGTTAG  150

seq1  AACATTGAGTTTCCTGAATAATCAATGCTTTTCTATTATTCACAAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGAGTTTCCTGAATAATCAATGCTTTTCTATTATTCACAAAATAA  200

seq1  TACTTAGTAGACACTGCCTATTTGTGTCTAGGATCTGAGAAGTTATTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGTAGACACTGCCTATTTGTGTCTAGGATCTGAGAAGTTATTCTG  250

seq1  CAAGAAATATCTAGGCCCAGAATTTATAACAGATCCCTTTAGCAAGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATATCTAGGCCCAGAATTTATAACAGATCCCTTTAGCAAGATTT  300

seq1  TGTGTAATTCAGTTAGTATGTTTGTTTAGAAAGTAAGAAGGGCTAGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATTCAGTTAGTATGTTTGTTTAGAAAGTAAGAAGGGCTAGAGTT  350

seq1  CACCTACTATACTCCATAGGGAAAATAATACACACACACACACACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACTATACTCCATAGGGAAAATAATACACACACACACACACACACA  400

seq1  CACACACACACACACACACATGACAGAGAGAGAGAGAGAGAGAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATGACAGAGAGAGAGAGAGAGAGAGAGAGAG  450

seq1  AGAGAGAGAGAGAGAGAGAGGCAGAGAGAGAGAGAGAAACAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGGCAGAGAGAGAGAGAGAAACAGAGAGAGAG  500

seq1  AGAAGCAGAGAGAGAGAGAGAAACAGAGAGACAGAAACAGAGAGACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGAGAGAGAGAGAGAAACAGAGAGACAGAAACAGAGAGACAGAA  550

seq1  ACAGAGAGACAGAAACAGAGAGAGACAGAGAGAACACACAGAAAGACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGACAGAAACAGAGAGAGACAGAGAGAACACACAGAAAGACTAT  600

seq1  ACATACAAACACACACATACACAAAAAAAAATGACAAACACACAGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAAACACACACATACACAAAAAAAAATGACAAACACACAGAGACA  650

seq1  GGGGAACACAAGGGAGAGAAACACACACACACACACACACACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACACAAGGGAGAGAAACACACACACACACACACACACACACACAC  700

seq1  ACACACACGAAGAAGGAGGAAAAGGAAAAGAAAAATACAAACCTATGT-A  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACACACACGAAGAAGGAGGAAAAGGAAAAGAAAAATACAAACCTATGTAA  750

seq1  ACTAAACAGCTCTTTAATAGGATTAATTTCAAATGACTCAAACTTCCAGC  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTAAACAGCTCTTTAATAGGATTAATTTCAAATGACTCAAACTCCCAGC  800

seq1  CCTTGCTTGG-AAAAACAATGTGCATGTGTCTAGAAGAGCCAGCCCTTCC  848
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTTGGAAAAAACAATGTGCATGTGTCTAGAAGAGCCAGCCCTTCC  850

seq1  CA-CCTTCCTCCATTGCTCCTTTAACAATGTTCTTCTCTATCAAC-TTCA  896
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACCCTTCCTCCATTGCTCCTTTAACAATGTTCTTCTCTATCAACTTTCA  900

seq1  TTGTCAAGTAGCTGTGCATTATACTTGTTT--GTTTTCTT--ACACATTT  942
      ||||||||||||||||||||||||||||||   |||||||  ||||||||
seq2  TTGTCAAGTAGCTGTGCATTATACTTGTTTTGTTTTTCTTTAACACATTT  950

seq1  CCAATTTCAAAAACCA-TCAACAGATCT--CTTTTCTGCA-TTCAAAATT  988
      |||||||||||||||| |||||||||||   ||||||||| |||||||||
seq2  CCAATTTCAAAAACCATTCAACAGATCTTCTTTTTCTGCATTTCAAAATT  1000

seq1  G-TTCTTCAGATTGA-TTTTATTATGTCC-TTCT-GTAATTCCCATAACA  1034
      | ||||||||||||| ||||||||||||| |||| ||| | |||||||||
seq2  GTTTCTTCAGATTGATTTTTATTATGTCCTTTCTGGTATTCCCCATAACA  1050

seq1  CATTGC-ATTTA-TTATGCCACTATAATA-TTAG-ATTTTGCATTTT---  1077
      |||||| ||||| ||||||||||||| || |||| ||||||||||||   
seq2  CATTGCAATTTATTTATGCCACTATATTATTTAGAATTTTGCATTTTTTA  1100

seq1  ATCTAGAATTCGAGTATATAAAAA  1101
       |||||| ||||||||| ||||||
seq2  TTCTAGATTTCGAGTATTTAAAAA  1124