BAC Information

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BAC

Clone NameB6Ng01-238E23
Chromosome10 (Build37)
Map Location 62,366,005 - 62,366,304
singlet/doubletsinglet
Overlap genenone
Upstream geneCol13a1, EG436164, EG432466, 2010107G23Rik, Neurog3, Tspan15, Tacr2, Hk1, 2210417K05Rik, Hkdc1, Supv3l1, Vps26a, Srgn, 2510003E04Rik, Ddx21, Ddx50, Stox1, Ccar1, Cxxc6
Downstream geneSlc25a16, Dna2l, Rufy2, Hnrph3, 3110049J23Rik, Pbld, Atoh7, Mypn, 1700120B22Rik, Herc4, Sirt1, Dnajc12, LOC665182, EG631906, Ctnna3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238E23.g
ACCGA049040
length513
definitionB6Ng01-238E23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caacggctggcttccagggtcaggttactccgacggaaaggatgcatcct
gcccctgggctaggacatcttgggacgctcccagttgcgtgtgggtcagt
ttacggtgctaggccagacatcgccctgacaagatcatagaatgcactta
tgtgctgggagaaatgggggataccctggataaccagaggtagagcatgg
gggtggggggtattgcaagagccaactcttcaacccctcgtttcattaat
ttatttactcatttatttattttgcgagaaatcaaacccagggccttgca
cataatggatatgtggctcatcagtcagttacactcctagaccaacagat
ctattgtacgggcagtaagcatacatactatcctggtcagcaataatgtg
gtctctgctctcctatactccggtgagagaggcagaccttaagtaaccac
agaaatattgggcaacactaaagtaggggtcagaagacgggcgtggtggc
cacgcctttaatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_62366005_62366304
seq2: B6Ng01-238E23.g_286_583

seq1  CAAGAGCCAACTCTTCAGCCCCTCGTTTCATTAATTTATTTACTCATTTA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAAGAGCCAACTCTTCAACCCCTCGTTTCATTAATTTATTTACTCATTTA  50

seq1  TTTATTTTGCTAGAAATCAAACCCAGGGCCTTGCACAGAATGGATATGTG  100
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  TTTATTTTGCGAGAAATCAAACCCAGGGCCTTGCACATAATGGATATGTG  100

seq1  GCTCATCAGTCAGTTACACTCCAGAGACCAGCAGATCTAGTGTACGGGCA  150
      ||||||||||||||||||||||  |||||| |||||||| ||||||||||
seq2  GCTCATCAGTCAGTTACACTCC-TAGACCAACAGATCTATTGTACGGGCA  149

seq1  GTAAGCATACAGACTATCATGGTCAGTAAGAATGTGGTCTCTGCTCTCCT  200
      ||||||||||| |||||| ||||||| || ||||||||||||||||||||
seq2  GTAAGCATACATACTATCCTGGTCAGCAATAATGTGGTCTCTGCTCTCCT  199

seq1  ATACTCCAGTGAGAGAGGCAGACCTTAAGTAACCATAGAAATATTGGCCA  250
      ||||||| ||||||||||||||||||||||||||| ||||||||||| ||
seq2  ATACTCCGGTGAGAGAGGCAGACCTTAAGTAACCACAGAAATATTGGGCA  249

seq1  ACACGAAAGTAGGGTTCCGAAGCCGGGCGTGGTGGCACACGCCTTTAATC  300
      |||| ||||||||| || |||| ||||||||||||| |||||||||||||
seq2  ACACTAAAGTAGGGGTCAGAAGACGGGCGTGGTGGC-CACGCCTTTAATC  298