BAC Information

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BAC

Clone NameB6Ng01-240E08
Chromosome10 (Build37)
Map Location 128,907,233 - 129,075,349
singlet/doubletdoublet
Overlap geneOlfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798
Upstream geneSmarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787
Downstream geneOlfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240E08.bB6Ng01-240E08.g
ACCGA050484GA050485
length1,0981,174
definitionB6Ng01-240E08.b B6Ng01-240E08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,907,233 - 128,908,329)(129,074,162 - 129,075,349)
sequence
gaattctcaagtttgcatctcacatgtaatatacatctgtatgagtgact
gctattattgtatgcacatatatatccatatcaaagtatcatgttatata
ccttaaatgcatacagatgttgtcactcatatttcaataagctgggtaaa
ataaaataaaaattttatcacatatacaccatctcacttttacattaaat
ggttagttgctttcacaatgcataacacttattttattttattattaatg
ttattaaattatacagtattcatgatagttattaaataataaatacaata
tatctttattatctggttacacatattttattgtcaaatatctgggaaaa
agtgtatgggaaagaataattaatataattaaccagaatttcacataaat
aaaatcttagtgttctttaatatttcttattaaattttaataggttgttt
aaaacattataaaggctaatatctataaatatgaatattgaaattaaata
taatgagaattatattgtaaaatgtgtttctgtttcattgtgagtacaat
gtgctttaattgttaatattttttaatttttaatatttaacacagcatta
tagccttttgttttatgataccctggcacctaacaaaactaagagtaaac
caccaaatgtatagaaaaattacatttgaaaaatataattaaatgtcaat
tgtttaagggttccaggtcttcaagaaagaacacttcatagttattttta
ttgctcatgagttattagatgagaataaaatgtgaagcaattgtaattaa
tggcagtaggtatttagtagatgacaacactgtgtgctctctgggataca
atgattaacacactctcaagagagacttactggtgagcagggttagaggt
tactgaaatattgaagaatgggttctagaaatcccccatggtctaacaag
atagcagagctatggcctgtctttattttgtccacaagggcacaaggttt
ttgaagtaaaaaacagatgcacatagagcatttccctacatagtacagat
agtactgctacttagattatagacgcctggagtaagatttccacatat
gaattcagtttagatattctttcaatgatgaggatttcaagctcacttga
gctcagtagtctgagtgacaatatcaaaaatattttggagatttcatgaa
ggatattacaatttatgttttatatagaaagtgtcattgtgggtcacttt
tatttgcctctaaaattatcttgtctgccagagtacttatgaatttatta
gaggatttttcttggaaatctatgatgtaatttggtacagattaaataat
taggacaggtggagtgaccatgaagatatgactatattctttctgaccat
gcatgtataatttatttccaatgaatcctatcccttcgttcttaattttt
atgaaacaaaaaatgacataataaatatatatttccttgtctagcaatgc
tgatcttgaatttttactacctctgatttttaaatgagtaaacatgagta
ttttagaggctaagaaaaaagaatgatggatggaaaaagaaacaagtaat
caaactaaagcatacttactcttctggacagcaatcatgactttagttga
tctatataatcttggatttcatggaggtgaaattgaaagtgtgatcaaat
gtgtactcaaatcttatgaagatgtacatagctgtagagaattattttgc
agaagatattgttctttttgattaacagattcatattaaagactctattc
tactctaaactcagtaaccaatttattacaacttaaaactgaaataaaga
cataaaatgatcttcagagttttttggtagctaatgtccaacttctcctc
tggacaaaaagaaattttaaattgtgaagaaagaaggttattttattttg
ctagtcttctgtgggtatataaatgataaagatgagagtcctttgtggcc
aaatataaacaggtttaatgaatgtaatagtcactaaattttggcagaat
attaacagcagaaaacgtgggatttgtgtccttggggacaataagaatac
aatagttttattacacattctacgacaataaataatgactgacaaaagac
atttagatttcaaaattctgtgttacttaactcataggtaataaagaata
ataagtgctaatctatgttttgacttgggaagttaagttatctcaaaggc
cagttaggtatctagtgtgaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128907233_128908329
seq2: B6Ng01-240E08.b_41_1138

seq1  GAATTCTCAAGTTTGCATCTCACATGTAATATACATCTGTATGAGTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGTTTGCATCTCACATGTAATATACATCTGTATGAGTGACT  50

seq1  GCTATTATTGTATGCACATATATATCCATATCAAAGTATCATGTTATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTATTGTATGCACATATATATCCATATCAAAGTATCATGTTATATA  100

seq1  CCTTAAATGCATACAGATGTTGTCACTCATATTTCAATAAGCTGGGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATGCATACAGATGTTGTCACTCATATTTCAATAAGCTGGGTAAA  150

seq1  ATAAAATAAAAATTTTATCACATATACACCATCTCACTTTTACATTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAAATTTTATCACATATACACCATCTCACTTTTACATTAAAT  200

seq1  GGTTAGTTGCTTTCACAATGCATAACACTTATTTTATTTTATTATTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTTGCTTTCACAATGCATAACACTTATTTTATTTTATTATTAATG  250

seq1  TTATTAAATTATACAGTATTCATGATAGTTATTAAATAATAAATACAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAATTATACAGTATTCATGATAGTTATTAAATAATAAATACAATA  300

seq1  TATCTTTATTATCTGGTTACACATATTTTATTGTCAAATATCTGGGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTATTATCTGGTTACACATATTTTATTGTCAAATATCTGGGAAAA  350

seq1  AGTGTATGGGAAAGAATAATTAATATAATTAACCAGAATTTCACATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGGGAAAGAATAATTAATATAATTAACCAGAATTTCACATAAAT  400

seq1  AAAATCTTAGTGTTCTTTAATATTTCTTATTAAATTTTAATAGGTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTAGTGTTCTTTAATATTTCTTATTAAATTTTAATAGGTTGTTT  450

seq1  AAAACATTATAAAGGCTAATATCTATAAATATGAATATTGAAATTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTATAAAGGCTAATATCTATAAATATGAATATTGAAATTAAATA  500

seq1  TAATGAGAATTATATTGTAAAATGTGTTTCTGTTTCATTGTGAGTACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGAATTATATTGTAAAATGTGTTTCTGTTTCATTGTGAGTACAAT  550

seq1  GTGCTTTAATTGTTAATATTTTTTAATTTTTAATATTTAACACAGCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTAATTGTTAATATTTTTTAATTTTTAATATTTAACACAGCATTA  600

seq1  TAGCCTTTTGTTTTATGATACCCTGGCACCTAACAAAACTAAGAGTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTTGTTTTATGATACCCTGGCACCTAACAAAACTAAGAGTAAAC  650

seq1  CACCAAATGTATAGAAAAATTACATTTGAAAAATATAATTAAATGTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATGTATAGAAAAATTACATTTGAAAAATATAATTAAATGTCAAT  700

seq1  TGTTTAAGGGTTCCAGGTCTTCAAGAAAGAACACTTCATAGTTATTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAGGGTTCCAGGTCTTCAAGAAAGAACACTTCATAGTTATTTTTA  750

seq1  TTGCTCATGAGTTATTAGATGAGAATAAAATGTGAAGCAATTGTAATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATGAGTTATTAGATGAGAATAAAATGTGAAGCAATTGTAATTAA  800

seq1  TGGCAGTAGGTATTTAGTAGATGACAACACTGTGTGCTCTCTGGGATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTAGGTATTTAGTAGATGACAACACTGTGTGCTCTCTGGGATACA  850

seq1  ATGATTAACACACTCTCAAGAGAGACTTACTGGTGAGCAGGGTTAGAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAACACACTCTCAAGAGAGACTTACTGGTGAGCAGGGTTAGAGGT  900

seq1  TACTGAAATATTGAAGAATGGGTTCTAGAAATCCCCCATGGTCT-ACAAG  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TACTGAAATATTGAAGAATGGGTTCTAGAAATCCCCCATGGTCTAACAAG  950

seq1  ATAGCAGAGCTATGGCCTGGTCTTTATTTTGTCCACAAGGGCACAAGGTT  999
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAGCAGAGCTATGGCCT-GTCTTTATTTTGTCCACAAGGGCACAAGGTT  999

seq1  TTTGAAGT-AAAAACAGATGCACATAGAGCATTT-CCTACATAAGTACAG  1047
      |||||||| ||||||||||||||||||||||||| ||||||| |||||||
seq2  TTTGAAGTAAAAAACAGATGCACATAGAGCATTTCCCTACAT-AGTACAG  1048

seq1  ATAGTACTGCTACTTAAGATTATAGAAGGCTGGAGT-AGATTTCCACATA  1096
      ||||||||||||||| |||||||||| | ||||||| |||||||||||||
seq2  ATAGTACTGCTACTT-AGATTATAGACGCCTGGAGTAAGATTTCCACATA  1097

seq1  T  1097
      |
seq2  T  1098

seq1: chr10_129074162_129075349
seq2: B6Ng01-240E08.g_63_1236 (reverse)

seq1  TATTT-ACACTTAGATA-CTAACT-GCCTTTGAGTATACTTATACTTCTC  47
      ||||| |||| |||||| |||||| |||||||||   ||||| ||||| |
seq2  TATTTCACAC-TAGATACCTAACTGGCCTTTGAGATAACTTA-ACTTCCC  48

seq1  AAGTCAAAACATAGATATAACCAACTTTATTATCTTTTATTACCTATGAG  97
      |||||||||||||||| || |  || |||||||  |||||||||||||||
seq2  AAGTCAAAACATAGAT-TAGC--AC-TTATTATTCTTTATTACCTATGAG  94

seq1  TTAAGTTAAACACAGAATTTTTGAAAATCCTAAATTGTCTTTTGTCAGTC  147
      ||||||  ||||||||| ||||||||   ||||| |||||||||||||||
seq2  TTAAGT--AACACAGAA-TTTTGAAA--TCTAAA-TGTCTTTTGTCAGTC  138

seq1  AATTATTTATTTGTCCTTAGAATGTGGTTAATAAAACTATTGTA-TCTTA  196
       |||||||| |||| | |||||||||  |||||||||||||||| |||||
seq2  -ATTATTTA-TTGT-CGTAGAATGTG--TAATAAAACTATTGTATTCTTA  183

seq1  TTGTCCCCAAGGACACAAATCCCACGTTTTCTGCTGTTTAATATTCTGCC  246
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGTCCCCAAGGACACAAATCCCACGTTTTCTGCTG-TTAATATTCTGCC  232

seq1  AAAATTTAGTGACTATTACATTCATTAAACCTGTTTATATTTGGCCACAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAGTGACTATTACATTCATTAAACCTGTTTATATTTGGCCACAA  282

seq1  AGGACTCTCATCTTTATCATTTATATACCCACAGAAGACTAGCAAAATAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTCATCTTTATCATTTATATACCCACAGAAGACTAGCAAAATAA  332

seq1  AATAACCTTCTTTCTTCACAATTTAAAATTTCTTTTTGTCCAGAGGAGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTTCTTTCTTCACAATTTAAAATTTCTTTTTGTCCAGAGGAGAA  382

seq1  GTTGGACATTAGCTACCAAAAAACTCTGAAGATCATTTTATGTCTTTATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACATTAGCTACCAAAAAACTCTGAAGATCATTTTATGTCTTTATT  432

seq1  TCAGTTTTAAGTTGTAATAAATTGGTTACTGAGTTTAGAGTAGAATAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTAAGTTGTAATAAATTGGTTACTGAGTTTAGAGTAGAATAGAG  482

seq1  TCTTTAATATGAATCTGTTAATCAAAAAGAACAATATCTTCTGCAAAATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATATGAATCTGTTAATCAAAAAGAACAATATCTTCTGCAAAATA  532

seq1  ATTCTCTACAGCTATGTACATCTTCATAAGATTTGAGTACACATTTGATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTACAGCTATGTACATCTTCATAAGATTTGAGTACACATTTGATC  582

seq1  ACACTTTCAATTTCACCTCCATGAAATCCAAGATTATATAGATCAACTAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCAATTTCACCTCCATGAAATCCAAGATTATATAGATCAACTAA  632

seq1  AGTCATGATTGCTGTCCAGAAGAGTAAGTATGCTTTAGTTTGATTACTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGATTGCTGTCCAGAAGAGTAAGTATGCTTTAGTTTGATTACTTG  682

seq1  TTTCTTTTTCCATCCATCATTCTTTTTTCTTAGCCTCTAAAATACTCATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCCATCCATCATTCTTTTTTCTTAGCCTCTAAAATACTCATG  732

seq1  TTTACTCATTTAAAAATCAGAGGTAGTAAAAATTCAAGATCAGCATTGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCATTTAAAAATCAGAGGTAGTAAAAATTCAAGATCAGCATTGCT  782

seq1  AGACAAGGAAATATATATTTATTATGTCATTTTTTGTTTCATAAAAATTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGAAATATATATTTATTATGTCATTTTTTGTTTCATAAAAATTA  832

seq1  AGAACGAAGGGATAGGATTCATTGGAAATAAATTATACATGCATGGTCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGAAGGGATAGGATTCATTGGAAATAAATTATACATGCATGGTCAG  882

seq1  AAAGAATATAGTCATATCTTCATGGTCACTCCACCTGTCCTAATTATTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATATAGTCATATCTTCATGGTCACTCCACCTGTCCTAATTATTTA  932

seq1  ATCTGTACCAAATTACATCATAGATTTCCAAGAAAAATCCTCTAATAAAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTACCAAATTACATCATAGATTTCCAAGAAAAATCCTCTAATAAAT  982

seq1  TCATAAGTACTCTGGCAGACAAGATAATTTTAGAGGCAAATAAAAGTGAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGTACTCTGGCAGACAAGATAATTTTAGAGGCAAATAAAAGTGAC  1032

seq1  CCACAATGACACTTTCTATATAAAACATAAATTGTAATATCCTTCATGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGACACTTTCTATATAAAACATAAATTGTAATATCCTTCATGAA  1082

seq1  ATCTCCAAAATATTTTTGATATTGTCACTCAGACTACTGAGCTCAAGTGA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAAATATTTTTGATATTGTCACTCAGACTACTGAGCTCAAGTGA  1132

seq1  GCTTGAAATCCTCATCATTGAAAGAATATCTAAACTGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAATCCTCATCATTGAAAGAATATCTAAACTGAATTC  1174