BAC Information

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BAC

Clone NameB6Ng01-243D21
Chromosome10 (Build37)
Map Location 50,215,609 - 50,216,724
singlet/doubletsinglet
Overlap genenone
Upstream geneGrik2, LOC629652
Downstream geneAscc3, Sim1, LOC268300, LOC100041768, Gp49a, Lilrb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243D21.bB6Ng01-243D21.g
ACCGA052679GA052680
length5911,109
definitionB6Ng01-243D21.b B6Ng01-243D21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaagatataagttacaatttgcaaaacacataaaactcaagaa
gaatgaagaccaaagtgtggacactttgccccttcttagaattgggaaca
aaacacccatggaagaagttacagagacaaagtttggagctgagacaaaa
ggatggaccatctagagactgccatacccagggttccatcccataatcag
cctccaaatgctgacaccattgcttaccctagcacgattttgctgatagg
accctgatatagctgtctctagtgagactatgctggggcctagcaaacac
agaagtggatgctcacagtcagatattagatggatcacaggtccccaatc
gaggagctaaagaaaatacaggagctaaagtgatctgcaaccctataggt
ggaacaacattatgaactaaccagtacccctgagctcttaactgtagctg
catatgtatcaatagatggcctagtcggccatcactggaaagagaggccc
attggacttgcaaactttatatgccccagtacaggggaacaccagggaca
aaaagttggagtgggtgtgtaggggagtgtgggggatggta

gaattccctagcctaattgagcagataaatctagcattcatttttttaaa
tgctaataaggcttttgtcattatcagacaaaggaataacctgaaaagaa
gatattttaagggaatggatatagaactccaatagggcagatagtctaaa
gataaagtttctttcttaaatatctagcatttctttttcagttaaaaagt
catttatttttgtcatatacagaaacacatattcaaaaaggtatagaaga
atttaggatgcaaagtacaccttctactcccaatttactttcccatagac
agccaacttagcactatggtttctgccttaagtacacaaatttaaacaca
cacacacaacataccacacactgaatttggcacatgcagatataaattaa
aaaaaaaactatgttaaaaaatgatgacatttggggctagagagatggct
cagtggttaagagcactgactgctcttccagaggtcctgagttcaattcc
cagcaaccaaatggtggcttacaatcatctctaatgggatccgaggccct
ctactggtgtatctgaacacagctacagtctactcatataaaaataaata
aatctttaaaataatgaaaaagaatgaagtttgaggacaatgtgtaaagt
taaaatacctaataacaaaaataaaactaccacataaatcgttcaaccat
gagtcaaattaaaaaatagaaatgattgctggggttaagtggaggaaggc
atgggaagtcactccgtggtcaatggggactaggtttcagtttggcaaac
aaaataatgtcctagatgcctattgcatatgcaagatccaggtagttaaa
agaattgaaataaacacataaaaatagtgaagatgttaaattctaagatt
tctgtgtttgttgtttggtttttgtttgttgtttgggttgttttgttttg
tttgtttttaccaattgaaacaatagccaaactaggacttattcatcttc
aatgtaatagcaacacagaatagccactgtagggtatggacttgcagcag
gttcacatttcaggtgagcaaagacttcagagctgacagccaacatttct
ttttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_50215609_50216724
seq2: B6Ng01-243D21.g_65_1173

seq1  GAATTCCCTAGCCTAATTGAGCAGATAAATCTAGCATTCATTTTTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAGCCTAATTGAGCAGATAAATCTAGCATTCATTTTTTTAAA  50

seq1  TGCTAATAAGGCTTTTGTCATTATCAGACAAAGGAATAACCTGAAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATAAGGCTTTTGTCATTATCAGACAAAGGAATAACCTGAAAAGAA  100

seq1  GATATTTTAAGGGAATGGATATAGAACTCCAATAGGGCAGATAGTCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTAAGGGAATGGATATAGAACTCCAATAGGGCAGATAGTCTAAA  150

seq1  GATAAAGTTTCTTTCTTAAATATCTAGCATTTCTTTTTCAGTTAAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGTTTCTTTCTTAAATATCTAGCATTTCTTTTTCAGTTAAAAAGT  200

seq1  CATTTATTTTTGTCATATACAGAAACACATATTCAAAAAGGTATAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTTTGTCATATACAGAAACACATATTCAAAAAGGTATAGAAGA  250

seq1  ATTTAGGATGCAAAGTACACCTTCTACTCCCAATTTACTTTCCCATAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGATGCAAAGTACACCTTCTACTCCCAATTTACTTTCCCATAGAC  300

seq1  AGCCAACTTAGCACTATGGTTTCTGCCTTAAGTACACAAATTTAAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACTTAGCACTATGGTTTCTGCCTTAAGTACACAAATTTAAACACA  350

seq1  CACACACAACATACCACACACTGAATTTGGCACATGCAGATATAAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAACATACCACACACTGAATTTGGCACATGCAGATATAAATTAA  400

seq1  AAAAAAAACTATGTTAAAAAATGATGACATTTGGGGCTAGAGAGATGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACTATGTTAAAAAATGATGACATTTGGGGCTAGAGAGATGGCT  450

seq1  CAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCC  500

seq1  CAGCAACCAAATGGTGGCTTACAATCATCTCTAATGGGATCCGAGGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCAAATGGTGGCTTACAATCATCTCTAATGGGATCCGAGGCCCT  550

seq1  CTACTGGTGTATCTGAACACAGCTACAGTCTACTCATATAAAAATAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGTGTATCTGAACACAGCTACAGTCTACTCATATAAAAATAAATA  600

seq1  AATCTTTAAAATAATGAAAAAGAATGAAGTTTGAGGACAATGTGTAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAAAATAATGAAAAAGAATGAAGTTTGAGGACAATGTGTAAAGT  650

seq1  TAAAATACCTAATAACAAAAATAAAACTACCACATAAATCGTTCAACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACCTAATAACAAAAATAAAACTACCACATAAATCGTTCAACCAT  700

seq1  GAGTCAAATTAAAAAATAGAAATGATTGCTGGGGTTAAGTGGAGGAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAATTAAAAAATAGAAATGATTGCTGGGGTTAAGTGGAGGAAGGC  750

seq1  ATGGGAAGTCACTCCGTGGTCAATGGGGACTAGGTTTCAGTTTGGCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGTCACTCCGTGGTCAATGGGGACTAGGTTTCAGTTTGGCAAAC  800

seq1  AAAATAATGTCCTAGATGCCTATTGCATATGCAAGATCCAGGTAGTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATGTCCTAGATGCCTATTGCATATGCAAGATCCAGGTAGTTAAA  850

seq1  AGAATTGAAATAAACACATAAAAATAGTGAAGATGTTAAATTCTAAGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAAATAAACACATAAAAATAGTGAAGATGTTAAATTCTAAGATT  900

seq1  TCTGTGTTTGTTGTTTGGTTTTTGTTTGTTGTTT-GGTTGTTTTGTTTTG  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTGTGTTTGTTGTTTGGTTTTTGTTTGTTGTTTGGGTTGTTTTGTTTTG  950

seq1  TTTTGTTTTTACCAAATTGAAACAATAGCCAAAACTAGGACTTATTCATC  999
       |||||||||||| |||||||||||||||| |||||||||||||||||||
seq2  -TTTGTTTTTACC-AATTGAAACAATAGCC-AAACTAGGACTTATTCATC  997

seq1  TTCAATGTAATAGCAACACAGAATAGCCACTGTAGGGTATGGACCTTGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||  | ||
seq2  TTCAATGTAATAGCAACACAGAATAGCCACTGTAGGGTATGGAC--TTGC  1045

seq1  AGCCAGGGTTCACATTTTCAGTGAGGCAAAGAACTCAGAGCTGACAGCAA  1099
      |||   |||||||||||   |||| |||||||  |||||||||||||| |
seq2  AGC--AGGTTCACATTTCAGGTGA-GCAAAGACTTCAGAGCTGACAGCCA  1092

seq1  ACATTTCTTTTTTTTTT  1116
      |||||||||||||||||
seq2  ACATTTCTTTTTTTTTT  1109


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