MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-245E22
Chromosome	19 (Build37)	10 (Build37)
Map Location	24,614,036 - 24,614,364	3,680,232 - 3,680,896
singlet/doublet	singlet	singlet
Overlap gene	Pip5k1b
Upstream gene	1700028P14Rik, LOC670565, LOC226030, EG625193, Ptar1, Apba1, Gm967, 1700021P04Rik, Tjp2, Fxn, LOC667743, LOC100042457, 2900009I07Rik
Downstream gene	E030010A14Rik, Pgm5, LOC672195, Foxd4, Cbwd1, Dock8, LOC100042503, Ankrd15, LOC433233, LOC383474, Dmrt1
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700028P14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67483 MGI:1914733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670565 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 533 ESTs, 1 Protein

name	LOC226030 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:226030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	EG625193 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625193 MGI:3646907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 295 ESTs, 3 Proteins

name	Ptar1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72351 MGI:1921875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs

name	Apba1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319924 MGI:1860297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm967 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381217 MGI:2685813
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 41 ESTs, 3 Proteins

name	1700021P04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75521 MGI:1922771
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Tjp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21873 MGI:1341872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fxn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14297 MGI:1096879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667743 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667743
definition	note : heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo : _no_value

name	Pip5k1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18719 MGI:107930
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042457 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042457
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	2900009I07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68034 MGI:1915284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030010A14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226040 MGI:3583948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226041 MGI:1925668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672195 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 486 ESTs, 11 Proteins

name	Foxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14237 MGI:1347467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cbwd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226043 MGI:2385089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dock8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76088 MGI:1921396
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 219 ESTs, 4 Proteins

name	Ankrd15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107351 MGI:2147707
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433233 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1207 ESTs, 7 Proteins pseudo : _no_value

name	LOC383474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Dmrt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50796 MGI:1354733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700028P14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361429 GeneID:67483 MGI:1914733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700028P14 gene transcript_id : NM_026188.2

name	LOC670565 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270445 GeneID:670565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 533 ESTs, 1 Protein product : similar to ribosomal protein S7 transcript_id : XM_001478207.1

name	EG625193 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270447 GeneID:625193 MGI:3646907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 282 ESTs, 3 Proteins product : predicted gene, EG625193 transcript_id : XM_001478220.1

name	EG625193 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270449 GeneID:625193 MGI:3646907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 140 ESTs, 1 Protein product : predicted gene, EG625193, transcript variant 2 transcript_id : XM_899946.3

name	Ptar1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270405 GeneID:72351 MGI:1921875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs product : protein prenyltransferase alpha subunit repeat containing 1, transcript variant 1 transcript_id : XM_129160.9

name	Apba1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79749979 GeneID:319924 MGI:1860297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amyloid beta (A4) precursor protein binding, family A, member 1 transcript_id : NM_177034.3

name	Gm967 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270406 GeneID:381217 MGI:2685813
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 41 ESTs, 3 Proteins product : gene model 967, (NCBI) transcript_id : XM_355152.6

name	1700021P04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405922 GeneID:75521 MGI:1922771
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700021P04 gene transcript_id : XM_992060.1

name	Tjp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353787 GeneID:21873 MGI:1341872
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tight junction protein 2 transcript_id : NM_011597.2

name	Fxn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892935 GeneID:14297 MGI:1096879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : frataxin transcript_id : NM_008044.2

name	Pip5k1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835699 GeneID:18719 MGI:107930
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol-4-phosphate 5-kinase, type 1 beta transcript_id : NM_008846.2

name	LOC100042457 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270451 GeneID:100042457
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042457 transcript_id : XM_001478372.1

name	2900009I07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560149 GeneID:68034 MGI:1915284
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900009I07 gene transcript_id : NM_026520.2

name	E030010A14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387742 GeneID:226040 MGI:3583948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E030010A14 gene transcript_id : NM_183160.3

name	Pgm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299817 GeneID:226041 MGI:1925668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglucomutase 5 transcript_id : NM_175013.2

name	LOC672195 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270455 GeneID:672195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 407 ESTs, 11 Proteins product : similar to cytochrome c, transcript variant 2 transcript_id : XM_001478404.1

name	LOC672195 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270453 GeneID:672195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 485 ESTs, 11 Proteins product : similar to cytochrome c, transcript variant 1 transcript_id : XM_001478395.1

name	Foxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679840 GeneID:14237 MGI:1347467
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box D4 transcript_id : NM_008022.1

name	Cbwd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130238 GeneID:226043 MGI:2385089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COBW domain containing 1 transcript_id : NM_146097.2

name	Dock8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62241029 GeneID:76088 MGI:1921396
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dedicator of cytokinesis 8 transcript_id : NM_028785.3

name	LOC100042503 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270459 GeneID:100042503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 219 ESTs, 4 Proteins product : similar to NADH dehydrogenase 1 beta subcomplex 4 transcript_id : XM_001478443.1

name	Ankrd15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677562 GeneID:107351 MGI:2147707
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 15 transcript_id : NM_181404.5

name	Dmrt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803189 GeneID:50796 MGI:1354733
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublesex and mab-3 related transcription factor 1 transcript_id : NM_015826.3

name	1700028P14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385700 CCDS:CCDS29708.1 GeneID:67483 MGI:1914733
definition	codon_start : 1 product : hypothetical protein LOC67483 protein_id : NP_080464.1

name	LOC670565 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270446 GeneID:670565
definition	codon_start : 1 product : similar to ribosomal protein S7 protein_id : XP_001478257.1

name	EG625193 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270448 GeneID:625193 MGI:3646907
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478270.1

name	EG625193 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998332 GeneID:625193 MGI:3646907
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_905039.1

name	Ptar1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998336 GeneID:72351 MGI:1921875
definition	codon_start : 1 product : protein prenyltransferase alpha subunit repeat containing 1 isoform 1 protein_id : XP_129160.6

name	Apba1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:79749980 GeneID:319924 MGI:1860297
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006886 - intracellular protein transport [Evidence IPI]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : amyloid beta (A4) precursor protein binding, family A, member 1 protein_id : NP_796008.2

name	Gm967 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270407 GeneID:381217 MGI:2685813
definition	codon_start : 1 product : similar to chromosome 9 open reading frame 61 protein_id : XP_355152.6

name	1700021P04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94405923 GeneID:75521 MGI:1922771
definition	codon_start : 1 product : hypothetical protein LOC75521 protein_id : XP_997154.1

name	Tjp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7549795 GeneID:21873 MGI:1341872
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : unclassified translation discrepancy product : tight junction protein 2 protein_id : NP_035727.1

name	Fxn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679863 CCDS:CCDS29711.1 GeneID:14297 MGI:1096879
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_process : GO:0006879 - iron ion homeostasis [Evidence IEA] codon_start : 1 note : Friedreich ataxia product : frataxin protein_id : NP_032070.1

name	Pip5k1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679329 GeneID:18719 MGI:107930
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046488 - phosphatidylinositol metabolism [Evidence IDA] codon_start : 1 note : phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha (MGD\|MGI:107930 GB\|NM_008846, evidence: BLASTN, 99%, match=2376); putative; PI4P5K-I[b] product : phosphatidylinositol-4-phosphate 5-kinase, type 1 beta protein_id : NP_032872.1

name	LOC100042457 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270452 GeneID:100042457
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478422.1

name	2900009I07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19882245 CCDS:CCDS29712.1 GeneID:68034 MGI:1915284
definition	codon_start : 1 product : hypothetical protein LOC68034 protein_id : NP_080796.1

name	E030010A14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147189 CCDS:CCDS29713.1 GeneID:226040 MGI:3583948
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : RIKEN cDNA E030010A14 protein_id : NP_898983.1

name	Pgm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608166 CCDS:CCDS29714.1 GeneID:226041 MGI:1925668
definition	GO_function : GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : phosphoglucomutase 5 protein_id : NP_778178.3

name	LOC672195 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270454 GeneID:672195
definition	codon_start : 1 product : similar to cytochrome c isoform 1 protein_id : XP_001478445.1

name	LOC672195 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270456 GeneID:672195
definition	codon_start : 1 product : similar to cytochrome c isoform 2 protein_id : XP_001478454.1

name	Foxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679841 CCDS:CCDS29715.1 GeneID:14237 MGI:1347467
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : forkhead homolog 2 product : forkhead box D4 protein_id : NP_032048.1

name	Cbwd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122605 GeneID:226043 MGI:2385089
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : dopamine responsive protein product : dopamine-responsive protein protein_id : NP_666209.1

name	Dock8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62241030 GeneID:76088 MGI:1921396
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0051020 - GTPase binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] codon_start : 1 product : dedicator of cytokinesis 8 protein_id : NP_083061.2

name	LOC100042503 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270460 GeneID:100042503
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478493.1

name	Ankrd15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677563 GeneID:107351 MGI:2147707
definition	codon_start : 1 product : ankyrin repeat domain 15 protein_id : NP_852069.4

name	Dmrt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254566 CCDS:CCDS29717.1 GeneID:50796 MGI:1354733
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007548 - sex differentiation [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : doublesex and mab-3 related transcription factor 1 protein_id : NP_056641.2

name	LOC226030 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:226030
definition	number : 1 pseudo : _no_value

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 1 pseudo : _no_value

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 2 pseudo : _no_value

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 3 pseudo : _no_value

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 4 pseudo : _no_value

name	LOC433233 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270463 GeneID:433233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1207 ESTs, 7 Proteins product : similar to hCG2028724 pseudo : _no_value transcript_id : XR_033703.1

clone name	MSMg01-279G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432B13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-132B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136E11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-496P18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-321P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-245E22.b	B6Ng01-245E22.g
ACC	GA054223	GA054224
length	686	1,008
definition	B6Ng01-245E22.b	B6Ng01-245E22.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(24,614,036 - 24,614,364)	(3,680,232 - 3,680,896)
sequence	gaattctctgtgaaaataaataaagtttaaagggatgaagagatgactca gtggttaagaatattgactgctcttccacagttcctaagttcaattccca gcaaccacatggtggctcataaccatctgtaatgggatccaatgcccttc tctaatgtatctgaagaatgcaacaatgtactcatataaaataaataagt aaatctctaaaaaaataaaaatttagactctgaaaatttttggagtgatt tccagggctcacatttctaaagtagcctttctgatttttaacatacaaaa tgctccctgaacttcctcactataagtttgactcagctattaaaaacaat gacttcatgaaacttacaggcaaatggaaagaagtagaaaatatcctgag tgaggtaagacaatcacaatagaacgcacatgctatgtactcactgataa gtgggtattaggaaaaaagcttggaattcccaacatacaactcgcagatc atatgaagctcaagaagcaagaccaaagtgtggatgcttcagttctacat agaagggggaacaaataatcatgggagatagatggagggaagggcctggg agggagagagaaagggagggaaaaagggggcatgatcaggtatgagatga gacagggaaaagtgaagagggtcagaaaattgggac	gaattccagggccaggatgcaggagtgagtgggttggggagtagggccgg gggagggtataggggcctttagggatagcatttgaagtgtaaatgaagaa aatatccactaaaaatcccttaaaaagaaatgttaatgaagaaactaata aaaattgttttaaaaaaatagcctagtatcattaggagtaattattttta ttatattttattttatatgccagcaatatttggttttactttaggtctct aggctatgtagtctctagtttttggttacccaagctgtgtcagatgtggg ttccatctaatgaattaagtaaatcaaatcagacattcgtcagttacccc atgatgtttgggtcacaattccctagcatcttttccaggcataactgagg gtagatccaaggttttgtgctctggctgatatttactcttctcttgtggt agcttatagggtacctttatatgtcattgacactagaacatagaagtgaa gattctatgtaggcaccagcttgactgattcatgttcaatgagttgcatg ggtgttttcttcagcaatggggccttgctaatggtttttggagagcaacc tgtcttggcaatagcctgggttgttttgggatttctgttggtccattttg gacagcaactcatttggatggaacacacttctggtattggaaggtatgtt tagtgacaatggatggccaattgggattgcatttcccatcattatttgaa gactttcattaggatcaccctcatttattattggaagttttccactgtat gagtttctgtgcagcccttcatgtgcctttcagttctgtctctcccctca ttccctccatcaatcctatctctctccacattcctacttgatcctcctgt tcttatctctccttcccacccagatcctgtacacccataaaaatctattt cgtttttcccttccagagagttcatttgtccccccaaattcccccctttt tttttttt
quality values	Open. Hide. 58 31 32 29 58 58 54 58 58 58 58 58 34 49 58 41 42 53 62 62 62 62 62 62 54 62 62 62 62 62 33 42 46 27 13 26 46 37 30 38 62 62 38 38 62 47 47 62 62 62 62 62 62 62 62 59 62 62 62 62 43 62 62 59 62 62 59 59 62 62 62 62 62 49 49 62 59 43 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 43 49 49 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 58 58 58 58 58 58 58 58 58 54 58 58 58 58 52 58 54 58 54 54 49 58 49 58 58 58 58 58 54 58 58 54 41 58 58 58 58 54 47 52 58 58 58 58 50 54 52 58 54 54 58 58 39 58 58 58 58 58 50 50 50 58 58 58 58 58 54 58 51 58 58 58 58 58 47 49 39 54 53 49 46 58 58 58 33 58 48 58 54 26 58 49 37 58 58 58 58 58 29 19 58 58 51 46 58 46 58 50 58 58 53 40 58 51 58 32 58 54 52 58 58 58 58 50 58 58 58 41 34 39 51 58 28 38 46 29 50 58 33 50 37 51 58 22 29 40 42 49 18 42 38 37 41 39 42 49 49 44 44 31 42 37 25 27 24 32 9 33 9 13 21 9 7 12 42 40 13 44 13 11 29 17 34 32	Open. Hide. 62 47 51 47 62 62 44 37 56 62 59 39 44 22 22 22 15 46 56 62 59 59 62 46 59 62 62 59 59 62 62 62 62 62 62 59 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 54 46 62 49 38 38 59 51 51 62 62 62 62 62 62 62 59 59 46 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 54 59 59 59 62 62 62 59 59 59 59 59 56 59 59 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 59 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 40 59 59 62 59 56 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 59 59 62 56 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 59 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 62 62 59 62 59 56 51 59 62 62 62 59 62 59 62 59 62 59 59 62 59 59 62 62 62 62 62 62 62 62 59 59 59 59 59 59 59 59 59 59 59 59 62 62 59 62 62 62 62 62 62 59 59 54 59 59 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 51 59 56 51 56 46 56 62 56 59 56 43 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 51 59 45 59 59 59 62 62 62 62 62 59 51 59 59 56 56 56 62 62 62 62 62 62 62 62 62 62 56 56 44 56 51 56 62 62 42 56 56 56 56 56 62 51 62 62 56 62 62 62 62 62 54 44 62 62 62 62 62 62 62 62 56 62 62 42 47 62 62 56 62 62 62 54 39 47 62 62 62 56 62 62 62 62 62 62 62 41 15 62 62 62 62 62 62 56 56 56 56 56 62 62 62 62 62 62 62 62 62 50 21 20 19 9 9 15 47 62 62 62 62 38 43 32 32 38 38 47 56 56 47 62 43 62 41 33 62 62 62 62 62 62 62 50 62 32 43 21 23 41 52 52 62 41 42 52 43 54 48 43 25 54 54 52 28 54 62 62 54 62 62 62 62 47 54 42 34 40 40 52 52 41 35 54 54 35 39 54 34 45 58 42 50 46 42 46 41 54 58 41 50 46 39 34 39 26 33 30 22 41 47 39 28 47 58 58 58 47 42 26 54 40 39 42 52 35 40 26 37 43 41 49 42 52 58 42 52 58 40 54 8 28 25 10 58 24 38 40 34 26 46 29 45 37 50 52 33 23 20 42 28 48 47 30 37 49 50 33 48 34 47 38 24 20 41 48 37 28 42 49 32 37 32 26 31 24 21 15 16 22 21 23 18 54 29 18 49 33 35 32 28 24 28 27 29 41 12 17 13 22 58 39 37 33 25 33 39 26 33 35 37 50 33 30 19 51 41 34 41 45 34 32 49 50 21 44 39 23 27 49 39 13 13 20 18 40 37 47 19 26 38 18 49 11 37 50 27 39 19 51 32 52 37 32 30 29 25 36 19 44 17 24 27 41 30 35 40 38 37 41 26 24 18 13 17 17 21 24 37 24 25 23 34 40 31 30 37 32 26 30 33 31 52 17 33 11 29 16 20 27 21 15 31 28 27 21 22 29 32 32 21 32 32 29 31 35 26 32 29 18 9 38 46 5 13 19 19 31 18 22 36 31 30 23 10 17 28 26 23 46 24 38 21 8 18 12 14 25 24 31 27 31 12 20 9 27 28 11 22 12 21 27 26 12 20 31 19 15 13 43 28 32 32 28 27 19 35 24 26 19 40 37 31 30 23 25 13 32 18 9 20 31 12 32 26 31 31 20 29 28 35 12 15 29 16 23 11 38 8 46 24 37 19 13 22 21 37 33 13 16 21 13 9 22 13 28 37 31 27 16 21 14 11 28 33 31 12 5 24 36 28 33 33 44 36 41 27 36 36

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_24614036_24614364
seq2: B6Ng01-245E22.b_139_406 (reverse)

seq1  GTTTCATGAAGTCATTGTTTTGATTA--AAAGTATTATTTATATCTCTGT  48
      ||||||||||||||||||||| | ||    |||   | |||||     ||
seq2  GTTTCATGAAGTCATTGTTTTTAATAGCTGAGTCAAACTTATA-----GT  45

seq1  ATACACTACAGTTCACGTGGAATGTGTTCCTTTTTTAAAAATATTTATTT  98
          |    |||||| |  | ||   ||  | | ||||||||        
seq2  GAGGA----AGTTCAGGGAGCAT---TTTGTATGTTAAAAAT--------  80

seq1  ATTTTATGTATATGAATACATTGTAGCTGTACAGATGGTTGTGAGCCTTC  148
                     | | |   || || || | |    ||||||||  |
seq2  --------------CAGAAAGGCTA-CTTTAGAAA----TGTGAGCC--C  109

seq1  ATGTGGTTGCTTGGAATTGAATTTTAGGACCTCTGCTCGCTCCGGTAGGC  198
        |   |  ||   ||   ||||||  ||  |||      |    ||   
seq2  TGGAAATCACTCCAAA---AATTTTCAGA-GTCTAAATTTT----TA---  148

seq1  CCCGCTTGCTCTGGCCCAAAGATTTATTTA-TTATTATATAATAAGTACA  247
           ||  | |     | ||||||| ||| ||||| ||| || ||||||
seq2  -----TTTTTTT-----AGAGATTTACTTATTTATTTTAT-ATGAGTACA  187

seq1  GTGTAGCTGTCTTCAGATGCACCAGAAGAGGGTGATCAGATCTCATTACG  297
       ||| ||  ||||||||| ||  || ||| ||  ||  |||| |||||| 
seq2  TTGTTGCATTCTTCAGATACATTAG-AGAAGGGCATTGGATCCCATTACA  236

seq1  GGGGCCTGTGAGCCACCATGTGGTTGCTGGGA  329
      |  |  | ||||||||||||||||||||||||
seq2  GATGGTTATGAGCCACCATGTGGTTGCTGGGA  268

seq1: chr10_3680232_3680896
seq2: B6Ng01-245E22.g_67_731

seq1  GAATTCCAGGGCCAGGATGCAGGAGTGAGTGGGTTGGGGAGTAGGGCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCAGGATGCAGGAGTGAGTGGGTTGGGGAGTAGGGCCGG  50

seq1  GGGAGGGTATAGGGGCCTTTAGGGATAGCATTTGAAGTGTAAATGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTATAGGGGCCTTTAGGGATAGCATTTGAAGTGTAAATGAAGAA  100

seq1  AATATCCACTAAAAATCCCTTAAAAAGAAATGTTAATGAAGAAACTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCACTAAAAATCCCTTAAAAAGAAATGTTAATGAAGAAACTAATA  150

seq1  AAAATTGTTTTAAAAAAATAGCCTAGTATCATTAGGAGTAATTATTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTTTTAAAAAAATAGCCTAGTATCATTAGGAGTAATTATTTTTA  200

seq1  TTATATTTTATTTTATATGCCAGCAATATTTGGTTTTACTTTAGGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTATTTTATATGCCAGCAATATTTGGTTTTACTTTAGGTCTCT  250

seq1  AGGCTATGTAGTCTCTAGTTTTTGGTTACCCAAGCTGTGTCAGATGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGTAGTCTCTAGTTTTTGGTTACCCAAGCTGTGTCAGATGTGGG  300

seq1  TTCCATCTAATGAATTAAGTAAATCAAATCAGACATTCGTCAGTTACCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTAATGAATTAAGTAAATCAAATCAGACATTCGTCAGTTACCCC  350

seq1  ATGATGTTTGGGTCACAATTCCCTAGCATCTTTTCCAGGCATAACTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTTGGGTCACAATTCCCTAGCATCTTTTCCAGGCATAACTGAGG  400

seq1  GTAGATCCAAGGTTTTGTGCTCTGGCTGATATTTACTCTTCTCTTGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCCAAGGTTTTGTGCTCTGGCTGATATTTACTCTTCTCTTGTGGT  450

seq1  AGCTTATAGGGTACCTTTATATGTCATTGACACTAGAACATAGAAGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATAGGGTACCTTTATATGTCATTGACACTAGAACATAGAAGTGAA  500

seq1  GATTCTATGTAGGCACCAGCTTGACTGATTCATGTTCAATGAGTTGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTATGTAGGCACCAGCTTGACTGATTCATGTTCAATGAGTTGCATG  550

seq1  GGTGTTTTCTTCAGCAATGGGGCCTTGCTAATGGTTTTTGGAGAGCAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTCTTCAGCAATGGGGCCTTGCTAATGGTTTTTGGAGAGCAACC  600

seq1  TGTCTTGGCAATAGCCTGGGTTGTTTTGGGATTTCTGTTGGTCCATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGCAATAGCCTGGGTTGTTTTGGGATTTCTGTTGGTCCATTTTG  650

seq1  GACAGCAACTCATTT  665
      |||||||||||||||
seq2  GACAGCAACTCATTT  665

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information