BAC Information

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BAC

Clone NameB6Ng01-246A07
Chromosome10 (Build37)
Map Location 51,906,777 - 51,907,820
singlet/doubletsinglet
Overlap geneRos1
Upstream geneLOC268300, LOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2
Downstream geneDcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246A07.bB6Ng01-246A07.g
ACCGA054752GA054753
length1,1871,054
definitionB6Ng01-246A07.b B6Ng01-246A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaaccctcacagatgcctctccctaaggaagatcacattcatt
cagctagcacctgagattcgagcaatgtctccccatgctaatgaggcatt
ttggtactctcatccttcagccaatgacctttgcccgtcttgaatgttcc
tacccccagtttcacaaattatatcagccttatagcacctcaagtaaggt
gcatctgtctctctgcagctggtcctggtgtgatcattctcatggcttcc
aatccccagcccctccctccaccccagtttgtcatctctgctccctttgc
cctcattgaccatatcatccgatggtgtctgaggacagggaaagtcacat
tacctactgagttctctgtctttccagcccttaggcttaggccttcttta
aaaattttcattacattgatgtcagaaggtacctaggaaagactaaggca
tgcaaatgagttttctggagatggcccaacgtttttgcacagcttacaat
gggtgagctctgagatgtgagatgaccagtgacttcatagcaggattgct
tcttgctgctgatatgcctttcctgtcactattacacagcctcatgattc
ctgggcatcagcccaccctattgggtaaattttcagctgagcaacatgaa
gatgtactctcatgcaataatgctgtatagatcaattgataatttcacaa
ttcctgataaggattttatagaactcttaaattaatacaagtaatcccaa
gccccctatagaataaagatgcaaatagagctctgtaaaccgccatgcat
cacggactaattgctctaggataagaaagcagcttgaaatgaatttacga
tcaaggaaaaatattcattccagtcagtcctaggatgaagccatggctgt
gctctatgataaaacaaggccgtgtgaaactgttgctttgagcttataat
gtgcttataggatgaaacactactttgaatttataccacatccttctgta
ctccccctttgtatacattttatctgtgagtatatgtggggcattgagct
atgcacagacagtctggtctccagtcaagttgagaggtgaacaaccccag
actgttgtgatactcactacattgggagagcattctcaattctctgactc
agggcctcttgtggaagatacgttgtcgctcctttac
gaattccaagacagccagggctaccctaagaaaccctatctctaaacctt
ttgttaaataaaaattataattcagtacaggcttttaagtatctattctc
acctggtgcaaacttgctatatgcctttcacatagactcctgattagtta
tgcaataattccaaataagtttcttgatgttcagggctaaaaataaccat
ctttgatatttattaataaattgttttctaaaaagttataatttacctct
taatcaatagtgaatgctgaccctaccttacccacacttttgttaaccat
gagcattttttcataaatactcatatctttaccaagttaatagcagaaat
aatttattggtttttttcctttccagttctttgcttgacctgaggttaac
tattatcacatgcattttagcagtttataattattatatttattgggagg
tggcttgagcatgtcaccagatgtgacagtcgtggagcaacttgcaagag
tgggttctctggttctaccatatgggtcctagggattgaacctagatcac
taggcttggctgcaagtttctttgcccacttagtcatcacactaacccta
aaactccttttgtggttatccttttcctattttaagtgcttttgtgtata
tccaatggaaaactaatcaaaaattttatatatcacttgcaatacctttt
ttcacactggaattttctttttatcattttctgtctattttcctaataaa
cagaataattgaagttttaaatagttaaactggctggattttgttttagg
ttttttctttctaaagatttatttatcttactatgtgaatttgaacgttt
tttcttgaattcatgcatgtctaccatatgcacacctgatgatcacttaa
ttctaggactacagatagtttgtgagcccaccatggatttatgggacttg
aactctggtccttacaagaacaaatgcctcttaccttaacccacttctat
agccccattgtaggctgttaggggggtggattctgatgattttgatatgg
gatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_51906777_51907820
seq2: B6Ng01-246A07.g_67_1119

seq1  GAATTCCAAGACAGCCAGGGCTACCCTAAGAAACCCTATCTCTAAACCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGACAGCCAGGGCTACCCTAAGAAACCCTATCTCTAAACCTT  50

seq1  TTGTTAAATAAAAATTATAATTCAGTACAGGCTTTTAAGTATCTATTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAATAAAAATTATAATTCAGTACAGGCTTTTAAGTATCTATTCTC  100

seq1  ACCTGGTGCAAACTTGCTATATGCCTTTCACATAGACTCCTGATTAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTGCAAACTTGCTATATGCCTTTCACATAGACTCCTGATTAGTTA  150

seq1  TGCAATAATTCCAAATAAGTTTCTTGATGTTCAGGGCTAAAAATAACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAATTCCAAATAAGTTTCTTGATGTTCAGGGCTAAAAATAACCAT  200

seq1  CTTTGATATTTATTAATAAATTGTTTTCTAAAAAGTTATAATTTACCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATATTTATTAATAAATTGTTTTCTAAAAAGTTATAATTTACCTCT  250

seq1  TAATCAATAGTGAATGCTGACCCTACCTTACCCACACTTTTGTTAACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATAGTGAATGCTGACCCTACCTTACCCACACTTTTGTTAACCAT  300

seq1  GAGCATTTTTTCATAAATACTCATATCTTTACCAAGTTAATAGCAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTTTTTCATAAATACTCATATCTTTACCAAGTTAATAGCAGAAAT  350

seq1  AATTTATTGGTTTTTTTCCTTTCCAGTTCTTTGCTTGACCTGAGGTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTGGTTTTTTTCCTTTCCAGTTCTTTGCTTGACCTGAGGTTAAC  400

seq1  TATTATCACATGCATTTTAGCAGTTTATAATTATTATATTTATTGGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCACATGCATTTTAGCAGTTTATAATTATTATATTTATTGGGAGG  450

seq1  TGGCTTGAGCATGTCACCAGATGTGACAGTCGTGGAGCAACTTGCAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGAGCATGTCACCAGATGTGACAGTCGTGGAGCAACTTGCAAGAG  500

seq1  TGGGTTCTCTGGTTCTACCATATGGGTCCTAGGGATTGAACCTAGATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCTCTGGTTCTACCATATGGGTCCTAGGGATTGAACCTAGATCAC  550

seq1  TAGGCTTGGCTGCAAGTTTCTTTGCCCACTTAGTCATCACACTAACCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTGGCTGCAAGTTTCTTTGCCCACTTAGTCATCACACTAACCCTA  600

seq1  AAACTCCTTTTGTGGTTATCCTTTTCCTATTTTAAGTGCTTTTGTGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCTTTTGTGGTTATCCTTTTCCTATTTTAAGTGCTTTTGTGTATA  650

seq1  TCCAATGGAAAACTAATCAAAAATTTTATATATCACTTGCAATACCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGGAAAACTAATCAAAAATTTTATATATCACTTGCAATACCTTTT  700

seq1  TTCACACTGGAATTTTCTTTTTATCATTTTCTGTCTATTTTCCTAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTGGAATTTTCTTTTTATCATTTTCTGTCTATTTTCCTAATAAA  750

seq1  CAGAATAATTGAAGTTTTAAATAGTTAAACTGGCTGGA-TTTGTTTTAGG  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGAATAATTGAAGTTTTAAATAGTTAAACTGGCTGGATTTTGTTTTAGG  800

seq1  -TTTTTCTTTCTAAAGATTTATTTATCTTACTATGTGAATTTGAACG-TT  847
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTTTTCTTTCTAAAGATTTATTTATCTTACTATGTGAATTTGAACGTTT  850

seq1  TTTCCTGAATTCATGCATGTCTACCATATGCACACCTGATGATCACTTAA  897
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGAATTCATGCATGTCTACCATATGCACACCTGATGATCACTTAA  900

seq1  TTCTAGGACTACAGATAG-TTGTGAG-CCACCATGGATTTATGGGACTTG  945
      |||||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  TTCTAGGACTACAGATAGTTTGTGAGCCCACCATGGATTTATGGGACTTG  950

seq1  AACCCTGGTCCTTACAAGAACAAATG-CTCTTAACCTAAACCCACTTCTA  994
      ||| |||||||||||||||||||||| ||||| |||| ||||||||||||
seq2  AACTCTGGTCCTTACAAGAACAAATGCCTCTT-ACCTTAACCCACTTCTA  999

seq1  TAGCCCCATTGTAGGCTGT--AGGGGGTGG-TTCTGATG-TTTTGATAGG  1040
      |||||||||||||||||||   |||||||| |||||||| |||||||| |
seq2  TAGCCCCATTGTAGGCTGTTAGGGGGGTGGATTCTGATGATTTTGATATG  1049

seq1  GGAT  1044
      ||||
seq2  GGAT  1053