BAC Information

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BAC

Clone NameB6Ng01-247K14
Chromosome10 (Build37)
Map Location 35,087,048 - 35,202,431
singlet/doubletdoublet
Overlap genenone
Upstream geneNt5dc1, Col10a1, Frk, LOC667824
Downstream geneLOC100041585, LOC667860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247K14.bB6Ng01-247K14.g
ACCGA055938GA055939
length1,1331,166
definitionB6Ng01-247K14.b B6Ng01-247K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,087,048 - 35,088,189)(35,201,281 - 35,202,431)
sequence
gaattcttaaattgaatttttaaaattggattgcttggcttgttgatgtc
tagtttcttcaggtcttttatgtgttttgaattttagccctatcttggat
gtggtattggttacagtctttcctgactttgtagtcattgattgctcttt
aaattgaatattctgaaataaacaattagtgacatttgtttttcttcaaa
tcaatgtaaataagtgtataataaatgaatatgtaaactatcttaacacc
aaatcttgcatgtaagtgcaaacgtacagagcttctgcccttgtgtctcc
tttcacacctggtattttctcttatttactcattggtgattatagtcatt
ttcatggaaagtccccagtaaaataatcaatattgcatgattaaattgtg
ttaatcatcagaataattgggtttatgttggcaaattcctacattcacat
gacttagtataattaaggcaggaagatgatgagttcagggataagcttgg
ttgtgcaataaaactcctccacctcaccataagaatatatcatcttatgt
tctttttctaatatcaacttacaagtttaatatgaaaaatgttttcataa
ctcatctttcccattacttcatgaagatacatttatttcctttgaagaat
attctttaataattttgaagattatcattgtgtacaaattttattgagtt
cacatgtccaaagatgtcttcatttcattttttattagatattttcttta
tttacatttcaaatgttatcccctttccttgtttcttctccaaaaacatc
ctccccctatcccttcccccttcccctgttccacaacccacccactctgc
ctttctggccctggcaatcccctacactcgggcatagagccttcacagga
ccaagggccctcttctcccattgatgaccgactaggccatcctctgctac
atatgtagctggagccatgagtcccatcatgtgtactctttagttggtgg
ttagttcattttacacttaaacagtagaaacaactttttcacatctagtt
tttgattgaatttataggtgagtatgttcttttaaataggatcccaactt
gttatgcaaaatgcttgaagcacagaattgatt

gaattcttaaaaaattggggaaggatggccttttgagtgctcctgctgac
tgttgtgtgtggaggaatgctttggtggatggcaagtatgcgaaggcagc
acaggcctgataaacgagccttagtgcaggctatggcaaccttggaagca
ggaccatccccccaatattggctcaacatgctggatccgtaataaatgat
gggtaagaccctcatgtgagcataccaatctaagacaagatggagaaagt
gaattcattactcccatgacaggtaaggatgtggcacagatgggggcaac
ctaagacagatgttgatcccagagctactgataaaacaaaacgggggaga
ttcgggaagcaggtgcaggcacaggccccgtgaaacccatttgtttactg
ccttgcccaagcatgcacagtgaggctgcatgcatgggctgcctgccagg
ctggactgttcttcatgatctggacctgtcagcctatcagtgaccaacct
gagcttgtgcctggagcatgagtgaattctgattggatgaggtggagtgg
agcagaaggaggtcagtcagtgcaaaaataggagtttttggttgttaccc
ttgctgaagtggagagagctgtaagaaaaaagatgacaagtaaaaggaga
agctgtatcgtgaacctgacttggtgtccgtgtagttcttgtgtctctgc
gggaagaaaagactgtggcaatcctgcttcttagagcaataactacagat
aaatttgaaaagattagtacattgagatgattacttaataactctgacac
ttcattcctgatgatgcctgcagcagtgagaattcaagatatctccacgt
caatgtgccaatttttcattaaaaagctattataccccagagattctaaa
cattcactatttctctttgagaggagactatgaacaaatcttaaaatcca
tttgctgtaatttttggtgatactttaaaggtatttacttattgctttag
tactcaaaaaaatattaggcatgtaaagaaaacacaaatttacttgggat
ataaattataaaattgactcattcctaggagggaagaattattcagaacc
ttatttcatattgaaccagaatttatattatatacatattatatgaactg
ggattcatttataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35087048_35088189
seq2: B6Ng01-247K14.b_46_1178

seq1  GAATTCTTAAATTGAATTTTTAAAATTGGATTGCTTGGCTTGTTGATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAATTGAATTTTTAAAATTGGATTGCTTGGCTTGTTGATGTC  50

seq1  TAGTTTCTTCAGGTCTTTTATGTGTTTTGAATTTTAGCCCTATCTTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTTCAGGTCTTTTATGTGTTTTGAATTTTAGCCCTATCTTGGAT  100

seq1  GTGGTATTGGTTACAGTCTTTCCTGACTTTGTAGTCATTGATTGCTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATTGGTTACAGTCTTTCCTGACTTTGTAGTCATTGATTGCTCTTT  150

seq1  AAATTGAATATTCTGAAATAAACAATTAGTGACATTTGTTTTTCTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAATATTCTGAAATAAACAATTAGTGACATTTGTTTTTCTTCAAA  200

seq1  TCAATGTAAATAAGTGTATAATAAATGAATATGTAAACTATCTTAACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAAATAAGTGTATAATAAATGAATATGTAAACTATCTTAACACC  250

seq1  AAATCTTGCATGTAAGTGCAAACGTACAGAGCTTCTGCCCTTGTGTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGCATGTAAGTGCAAACGTACAGAGCTTCTGCCCTTGTGTCTCC  300

seq1  TTTCACACCTGGTATTTTCTCTTATTTACTCATTGGTGATTATAGTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACCTGGTATTTTCTCTTATTTACTCATTGGTGATTATAGTCATT  350

seq1  TTCATGGAAAGTCCCCAGTAAAATAATCAATATTGCATGATTAAATTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAAAGTCCCCAGTAAAATAATCAATATTGCATGATTAAATTGTG  400

seq1  TTAATCATCAGAATAATTGGGTTTATGTTGGCAAATTCCTACATTCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATCAGAATAATTGGGTTTATGTTGGCAAATTCCTACATTCACAT  450

seq1  GACTTAGTATAATTAAGGCAGGAAGATGATGAGTTCAGGGATAAGCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGTATAATTAAGGCAGGAAGATGATGAGTTCAGGGATAAGCTTGG  500

seq1  TTGTGCAATAAAACTCCTCCACCTCACCATAAGAATATATCATCTTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAATAAAACTCCTCCACCTCACCATAAGAATATATCATCTTATGT  550

seq1  TCTTTTTCTAATATCAACTTACAAGTTTAATATGAAAAATGTTTTCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCTAATATCAACTTACAAGTTTAATATGAAAAATGTTTTCATAA  600

seq1  CTCATCTTTCCCATTACTTCATGAAGATACATTTATTTCCTTTGAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTTCCCATTACTTCATGAAGATACATTTATTTCCTTTGAAGAAT  650

seq1  ATTCTTTAATAATTTTGAAGATTATCATTGTGTACAAATTTTATTGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAATAATTTTGAAGATTATCATTGTGTACAAATTTTATTGAGTT  700

seq1  CACATGTCCAAAGATGTCTTCATTTCATTTTTTATTAGATATTTTCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTCCAAAGATGTCTTCATTTCATTTTTTATTAGATATTTTCTTTA  750

seq1  TTTACATTTCAAATGTTATCCCCTTTCCTTGTTTCTTCTCCAAAAACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTCAAATGTTATCCCCTTTCCTTGTTTCTTCTCCAAAAACATC  800

seq1  CTCCCCCTATCCCTTCCCCCTTCCCCTGTTCCACAACCCACCCACTCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTATCCCTTCCCCCTTCCCCTGTTCCACAACCCACCCACTCTGC  850

seq1  CTTTCTGGCCCTGGCAATCCCCTACACTCGGGCATAGAGCCTTCACAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGCCCTGGCAATCCCCTACACTCGGGCATAGAGCCTTCACAGGA  900

seq1  CCAAGGG-CCTCTTCTCCCATTGATGACCGACTAGGCCATCCTCTGCTAC  949
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGCCCTCTTCTCCCATTGATGACCGACTAGGCCATCCTCTGCTAC  950

seq1  ATATGTAGCTGGAGCCATGAGTCCCATCATGTGTACTCTTTAGTTGGTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGCTGGAGCCATGAGTCCCATCATGTGTACTCTTTAGTTGGTGG  1000

seq1  TTTAGTTCATTTTAACACTTAAACAGTAG-AACAAC-TTTTCACAATCTT  1047
       |||||||||||| ||||||||||||||| |||||| ||||||| ||| |
seq2  -TTAGTTCATTTT-ACACTTAAACAGTAGAAACAACTTTTTCAC-ATC-T  1046

seq1  AGTTTTTGATTGATTTATTAGGTGAGTATGTTCTTTTAATTAGGGCCCCA  1097
      ||||||||||||| ||  ||||||||||||||||||||| ||||  ||||
seq2  AGTTTTTGATTGAATTTATAGGTGAGTATGTTCTTTTAAATAGGATCCCA  1096

seq1  CCTTGTAATGCAAAATGCCTTTGAAAGCACAGATTGTTGTTGATT  1142
       ||||| |||||||||||  ||| |||||||||      ||||||
seq2  ACTTGTTATGCAAAATGC--TTG-AAGCACAGA-----ATTGATT  1133


seq1: chr10_35201281_35202431
seq2: B6Ng01-247K14.g_69_1234 (reverse)

seq1  TTTTAT-AATGAAT--CAATTCATAT-ATATGTATAT-ATATATA-TCTG  44
      |||||| |||||||  || ||||||| |||||||||| ||||| | ||||
seq2  TTTTATAAATGAATCCCAGTTCATATAATATGTATATAATATAAATTCTG  50

seq1  G-TCAATATG-AATAAGTTCCTGAATAA-TCTTCCCTCTTGGGAATGAGT  91
      | |||||||| |||||| | |||||||| ||||||||| | |||||||||
seq2  GTTCAATATGAAATAAGGTTCTGAATAATTCTTCCCTCCTAGGAATGAGT  100

seq1  C-ATTTTATTATTTATAT-CCAAGTAATTTTGTGTTTTCTTTACATGCCT  139
      | ||||||| |||||||| |||||||| ||||||||||||||||||||||
seq2  CAATTTTATAATTTATATCCCAAGTAAATTTGTGTTTTCTTTACATGCCT  150

seq1  AATA-TTTTTTGAGTACTAAAGCAATAAGT-AATACC-TTAAAGTATCCA  186
      |||| ||||||||||||||||||||||||| |||||| ||||||||||  
seq2  AATATTTTTTTGAGTACTAAAGCAATAAGTAAATACCTTTAAAGTATCAC  200

seq1  CCAAAATTACAGCAAATGGATTTTAAGATTTGTTCATAGTCTCCTCTCAA  236
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTACAGCAAATGGATTTTAAGATTTGTTCATAGTCTCCTCTCAA  250

seq1  AGAGAAATAGTGAATGTTTAGAATCTCTGGGGTATAATAGCTTTTTAATG  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATAGTGAATGTTTAGAATCTCTGGGGTATAATAGCTTTTTAATG  300

seq1  -AAAATTGGCACATTGACGTGGAGATATCTTGAATTCTCACTGCTGCAGG  335
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGGCACATTGACGTGGAGATATCTTGAATTCTCACTGCTGCAGG  350

seq1  CATCATCAGGAATGAAGTGTCAGAGTTATTAAGTAATCATCTCAATGTAC  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCAGGAATGAAGTGTCAGAGTTATTAAGTAATCATCTCAATGTAC  400

seq1  TAATCTTTTCAAATTTATCTGTAGTTATTGCTCTAAGAAGCAGGATTGCC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTTCAAATTTATCTGTAGTTATTGCTCTAAGAAGCAGGATTGCC  450

seq1  ACAGTCTTTTCTTCCCGCAGAGACACAAGAACTACACGGACACCAAGTCA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTTTTCTTCCCGCAGAGACACAAGAACTACACGGACACCAAGTCA  500

seq1  GGTTCACGATACAGCTTCTCCTTTTACTTGTCATCTTTTTTCTTACAGCT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCACGATACAGCTTCTCCTTTTACTTGTCATCTTTTTTCTTACAGCT  550

seq1  CTCTCCACTTCAGCAAGGGTAACAACCAAAAACTCCTATTTTTGCACTGA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACTTCAGCAAGGGTAACAACCAAAAACTCCTATTTTTGCACTGA  600

seq1  CTGACCTCCTTCTGCTCCACTCCACCTCATCCAATCAGAATTCACTCATG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTCCTTCTGCTCCACTCCACCTCATCCAATCAGAATTCACTCATG  650

seq1  CTCCAGGCACAAGCTCAGGTTGGTCACTGATAGGCTGACAGGTCCAGATC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGCACAAGCTCAGGTTGGTCACTGATAGGCTGACAGGTCCAGATC  700

seq1  ATGAAGAACAGTCCAGCCTGGCAGGCAGCCCATGCATGCAGCCTCACTGT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAACAGTCCAGCCTGGCAGGCAGCCCATGCATGCAGCCTCACTGT  750

seq1  GCATGCTTGGGCAAGGCAGTAAACAAATGGGTTTCACGGGGCCTGTGCCT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTGGGCAAGGCAGTAAACAAATGGGTTTCACGGGGCCTGTGCCT  800

seq1  GCACCTGCTTCCCGAATCTCCCCCGTTTTGTTTTATCAGTAGCTCTGGGA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCTTCCCGAATCTCCCCCGTTTTGTTTTATCAGTAGCTCTGGGA  850

seq1  TCAACATCTGTCTTAGGTTGCCCCCATCTGTGCCACATCCTTACCTGTCA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCTGTCTTAGGTTGCCCCCATCTGTGCCACATCCTTACCTGTCA  900

seq1  TGGGAGTAATGAATTCACTTTCTCCATCTTGTCTTAGATTGGTATGCTCA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTAATGAATTCACTTTCTCCATCTTGTCTTAGATTGGTATGCTCA  950

seq1  CATGAGGGTCTTACCCATCATTTATTACGGATCCAGCATGTTGAGCCAAT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGGTCTTACCCATCATTTATTACGGATCCAGCATGTTGAGCCAAT  1000

seq1  ATTGGGGGGATGGTCCTGCTTCCAAGGTTGCCATAGCCTGCACTAAGGCT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGGGATGGTCCTGCTTCCAAGGTTGCCATAGCCTGCACTAAGGCT  1050

seq1  CGTTTATCAGGCCTGTGCTGCCTTCGCATACTTGCCATCCACCAAAGCAT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTATCAGGCCTGTGCTGCCTTCGCATACTTGCCATCCACCAAAGCAT  1100

seq1  TCCTCCACACACAACAGTCAGCAGGAGCACTCAAAAGGCCATCCTTCCCC  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACACACAACAGTCAGCAGGAGCACTCAAAAGGCCATCCTTCCCC  1150

seq1  AATTTTTTAAGAATTC  1151
      ||||||||||||||||
seq2  AATTTTTTAAGAATTC  1166


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