BAC Information

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BAC

Clone NameB6Ng01-251C02
Chromosome10 (Build37)
Map Location 110,555,260 - 110,688,627
singlet/doubletdoublet
Overlap geneEG432502, LOC667904, Osbpl8
Upstream geneLOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17
Downstream geneBbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251C02.bB6Ng01-251C02.g
ACCGA058483GA058484
length1,133381
definitionB6Ng01-251C02.b B6Ng01-251C02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,687,504 - 110,688,627)(110,555,260 - 110,555,646)
sequence
gaattccctaatgacagaatcagtcacaggtaacttggacacctacggta
gcctttgttctaatgtttccatatttggaataggctcacaataattctac
tgaagagaacgcttctgtcaggtaattataagtccatgtcaagttgtgtt
tacttctagtgacttcagtttcttgtctagataaattttatattagataa
tttcttagcacacagagtttacttctactaaaacaggacactggttctga
gtaaatgagctttctaaagaatacaaatgctagcatcattgacaagctgc
gtcacaggagcaaactcggcttgctaaccattgctgtttagatataacag
caaacagtttatgctgctttggtcttttttaaaaaactgcttgtacttct
accaacgcaagtttaactaacagccatatgctgaagacccaagaactata
aaatgtatggtaacaaaggctgagggtccggaaggtgggtgagcaggtag
cagaacttgccagccactcaccatgacaacctgggtacaatctccaggac
ccacatagtggaaagaaccaaatcctgcaaggtgctctctgacctcgaca
tgagcccacagcctgctctctctctctctctctctctcacacacacacac
acacacacacacacacacacacacacactaaataattgtaactttaaaag
tgtttactatttatctgtggatattttgcttgagtttatgtatgtgtagc
acatgcaaacctggtactcatcgagtccagaagaaggtgtccgaacatct
gaaactggagttataggcgctgtgagccaccatgtggtactggttatgga
acctgtgttctctgaaggagcactcagtgctcttaaccactgaaccatct
ctctgggcctgaataattctaatttttttaaaatttaagaaaatttaaaa
tttaagaagtaaaacactattttttaaaagcctgaagtaaagtcttttta
taggtgatttctttgctaaggatttcccacaattcttaaggtagtgttct
agaaaacagtacaaaaagcttgtaaataagatctgagaatttagaagatt
aatatttagattctactaagcaaagcatactgc
accatttagactagaagaagaagagttggttgagccatttgcatttgcgc
agagggtaggggtcacctataacatcccctggttagaacttcaggactcc
acgctagggggaattcccagtggggataagaggctgctttttctagtctc
gtgttaaccggctttccttcacgagtttcttctcgtgagaatcaagataa
tatctgagatgctaagcaattaaaaaaaaaaaaaggcaagaaatggagct
gacagctcctagatgctgtgaaggaggaagtttattacagataagtggaa
gagttagcgagagacagacacacgtgggggaacccaagcagtcatgactt
tgaaccacgtggggagaaggggagaggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110687504_110688627
seq2: B6Ng01-251C02.b_43_1175 (reverse)

seq1  GCAGTATGCTTTGCTTAGTTAGGATCTAATTAT--ATC-TCTAAA-TCTC  46
      |||||||||||||||||| ||| |||||| |||  ||| |||||| ||||
seq2  GCAGTATGCTTTGCTTAG-TAGAATCTAAATATTAATCTTCTAAATTCTC  49

seq1  AGATCTTATTTAC-AGC-TTTTGTACTTGTTTCTAGAACACTACC-TAAG  93
      ||||||||||||| ||| |||||||||  |||||||||||||||| ||||
seq2  AGATCTTATTTACAAGCTTTTTGTACTGTTTTCTAGAACACTACCTTAAG  99

seq1  AATTGTGGGAAATCCTTAGCAAAGAAATCACCTAT-AAAAGACTTTACTT  142
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AATTGTGGGAAATCCTTAGCAAAGAAATCACCTATAAAAAGACTTTACTT  149

seq1  CAGGCTTTT-AAAAATAGTGTTTTACTTCTTAAATTTTAAATTTTCTTAA  191
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTTAAAAAATAGTGTTTTACTTCTTAAATTTTAAATTTTCTTAA  199

seq1  ATTTT-AAAAAATTAGAATTATTCAGGCCCAGAGAGATGGTTCAGTGGTT  240
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAAAATTAGAATTATTCAGGCCCAGAGAGATGGTTCAGTGGTT  249

seq1  AAGAGCACTGAGTGCTCCTTCAGAGAACACAGGTTCCATAACCAGTACCA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTGAGTGCTCCTTCAGAGAACACAGGTTCCATAACCAGTACCA  299

seq1  CATGGTGGCTCACAGCGCCTATAACTCCAGTTTCAGATGTTCGGACACCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGGCTCACAGCGCCTATAACTCCAGTTTCAGATGTTCGGACACCT  349

seq1  TCTTCTGGACTCGATGAGTACCAGGTTTGCATGTGCTACACATACATAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGACTCGATGAGTACCAGGTTTGCATGTGCTACACATACATAAA  399

seq1  CTCAAGCAAAATATCCACAGATAAATAGTAAACACTTTTAAAGTTACAAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCAAAATATCCACAGATAAATAGTAAACACTTTTAAAGTTACAAT  449

seq1  TATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGA  499

seq1  GAGAGAGAGAGAGAGAGAGCAGGCTGTGGGCTCATGTCGAGGTCAGAGAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGCAGGCTGTGGGCTCATGTCGAGGTCAGAGAG  549

seq1  CACCTTGCAGGATTTGGTTCTTTCCACTATGTGGGTCCTGGAGATTGTAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGCAGGATTTGGTTCTTTCCACTATGTGGGTCCTGGAGATTGTAC  599

seq1  CCAGGTTGTCATGGTGAGTGGCTGGCAAGTTCTGCTACCTGCTCACCCAC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTGTCATGGTGAGTGGCTGGCAAGTTCTGCTACCTGCTCACCCAC  649

seq1  CTTCCGGACCCTCAGCCTTTGTTACCATACATTTTATAGTTCTTGGGTCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGGACCCTCAGCCTTTGTTACCATACATTTTATAGTTCTTGGGTCT  699

seq1  TCAGCATATGGCTGTTAGTTAAACTTGCGTTGGTAGAAGTACAAGCAGTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATATGGCTGTTAGTTAAACTTGCGTTGGTAGAAGTACAAGCAGTT  749

seq1  TTTTAAAAAAGACCAAAGCAGCATAAACTGTTTGCTGTTATATCTAAACA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAAGACCAAAGCAGCATAAACTGTTTGCTGTTATATCTAAACA  799

seq1  GCAATGGTTAGCAAGCCGAGTTTGCTCCTGTGACGCAGCTTGTCAATGAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGTTAGCAAGCCGAGTTTGCTCCTGTGACGCAGCTTGTCAATGAT  849

seq1  GCTAGCATTTGTATTCTTTAGAAAGCTCATTTACTCAGAACCAGTGTCCT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCATTTGTATTCTTTAGAAAGCTCATTTACTCAGAACCAGTGTCCT  899

seq1  GTTTTAGTAGAAGTAAACTCTGTGTGCTAAGAAATTATCTAATATAAAAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTAGAAGTAAACTCTGTGTGCTAAGAAATTATCTAATATAAAAT  949

seq1  TTATCTAGACAAGAAACTGAAGTCACTAGAAGTAAACACAACTTGACATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAGACAAGAAACTGAAGTCACTAGAAGTAAACACAACTTGACATG  999

seq1  GACTTATAATTACCTGACAGAAGCGTTCTCTTCAGTAGAATTATTGTGAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATAATTACCTGACAGAAGCGTTCTCTTCAGTAGAATTATTGTGAG  1049

seq1  CCTATTCCAAATATGGAAACATTAGAACAAAGGCTACCGTAGGTGTCCAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCCAAATATGGAAACATTAGAACAAAGGCTACCGTAGGTGTCCAA  1099

seq1  GTTACCTGTGACTGATTCTGTCATTAGGGAATTC  1124
      ||||||||||||||||||||||||||||||||||
seq2  GTTACCTGTGACTGATTCTGTCATTAGGGAATTC  1133

seq1: chr10_110555260_110555646
seq2: B6Ng01-251C02.g_64_450

seq1  GAATTCACCATTTAGACTAGAAGAAGAAGAGTTGGTTGAGCCATTTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTTAGACTAGAAGAAGAAGAGTTGGTTGAGCCATTTGCAT  50

seq1  TTGCGCAGAGGGTAGGGGTCACCTATAACATCCCCTGGTTAGAACTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCAGAGGGTAGGGGTCACCTATAACATCCCCTGGTTAGAACTTCAG  100

seq1  GACTCCACGCTAGGGGGAATTCCCAGTGGGGATAAGAGGCTGCTTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCACGCTAGGGGGAATTCCCAGTGGGGATAAGAGGCTGCTTTTTCT  150

seq1  AGTCTCGTGTTAACCGGCTTTCCTTCACGAGTTTCTTCTCGTGAGAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCGTGTTAACCGGCTTTCCTTCACGAGTTTCTTCTCGTGAGAATCA  200

seq1  AGATAATATCTGAGATGCTAAGCAATTAAAAAAAAAAAAAGGCAAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATATCTGAGATGCTAAGCAATTAAAAAAAAAAAAAGGCAAGAAAT  250

seq1  GGAGCTGACAGCTCCTAGATGCTGTGAAGGAGGAAGTTTATTACAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGACAGCTCCTAGATGCTGTGAAGGAGGAAGTTTATTACAGATAA  300

seq1  GTGGAAGAGTTAGCGAGAGACAGACACACGTGGGGGAACCCAAGCAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGAGTTAGCGAGAGACAGACACACGTGGGGGAACCCAAGCAGTCA  350

seq1  TGACTTTGAACCACGTGGGGAGAAGGGGAGAGGAAGG  387
      |||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGAACCACGTGGGGAGAAGGGGAGAGGAAGG  387