BAC Information

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BAC

Clone NameB6Ng01-251P16
Chromosome10 (Build37)
Map Location 94,579,397 - 94,738,864
singlet/doubletdoublet
Overlap geneCradd
Upstream geneFgd6, Nr2c1, Ndufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik, Plxnc1
Downstream geneSocs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119, Eea1, EG432491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251P16.bB6Ng01-251P16.g
ACCGA059101GA059102
length1,0921,054
definitionB6Ng01-251P16.b B6Ng01-251P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,737,793 - 94,738,864)(94,579,397 - 94,580,441)
sequence
gaattcctaacgaggacagtactctcacagctggggaacgtcagtgcacg
aagtttgcgataatagattgtgggagcatgtatgaacgggcatgctcttc
attttgacagtatttatcacaggctgcgcccttcagcatagcgtttctac
ttctaagactctttctgaaaggagcaattaaaaattgattaactaattaa
ttagtatttatttgagacaagatcttgctttatagagtagcctggctgtg
aactcatagagatccacctgcctctgtcccaagtgctggaataaaaggtg
cttaccaccccctggctctataaggactaatcgggcaagtacttgtatat
aaaagcatattcctaccagtattgtttatataagtaaaaggcccaaatca
gtatctgtcattgagccattgctcaactcaggagtgggagaactaaagtg
gcatatctagttactaagttttaaatattgctcctaatttccaactggct
ggaacaagaaggcagaacaaagcagttacgtaacaggacatgcggctcag
cggagctggacagctccggtgttatgtgctgaagtgtgcctgccagtcag
aggctggggagcctggcatgtagagccgatgtcttttctcccgtatgcct
tcctacagtatctgcggatacagttttactattacatttgccgaggtatt
tactctagttggtaattttttttttcttcaaaatggtggcgcatctcacc
ttgaagactgagctcacgggttggtgactaggaaagtgttctacaaaagc
tcgttaactttgcgttcattcatgagtttgggggtacttttaaaaacttc
catttccttgagagcagttgatgcaaagtatcagattatatatgcacacg
aaattctcaggttttcctcaagaattttaataggttgttccaagctgtct
gggttttcaatttccacctcagtgtgaagctgtgctgagtaaaatttcgt
ggatagaagtggaaggaagtctctactgaatggtcccttaaaccaagtag
ttgcaaatgttagccttttcctcatttgaactcgcgttaccc
gaattccctccccctagtaggaggatctctattgcaggattccatcaata
ctggagcccagtagctgaagggttaatgctgggagcaacaggactctcca
accgtgttggtcatgacctcaccttcacctgttcttaggaactcccaagt
gttgataagagtacccaagttcaagtctgtctgattcatacttcccatga
acttcttggtgcaactgaacttcccacgaatttcttgattcctcggagtc
ttagctttcttgtctccaagacagacgtgagagccacattgcagggtttg
cagtaagatcacagagtttatgggcatttgcattttagattgtaattacc
agtgtatgccagttttgaagaaggttagtaagcgtgccagaattctgaga
acattccagggggaggcagtgctaatcttggccccttatgctgacattgt
tgctgaccaaccttgccatacctggcagccaaaagtggggagaacaggat
gaggctcacttctcaaagccagtacactgtcctaattggcagcaagcttt
ttcttcaaacacttaactcatctaagtctctcagggtgtatgagaaggcc
tggttttctttgcttttgtttttccatatacttcttgattggtccagtga
gcttgaaggtcgaaagggcttctgagaatcctgttttcttggaagccttt
aagagtccaggcactagtccctggaaaatatgaggttcttgggggatttt
tagaagcttaaactttttccatcaaagttaaaatatctagaaacccgttc
ctgggaagcgtcgtcaacaccttcttaattggcccagttggcatcgtctc
aaggctgtggtttccaattcagatcttggcataataccaagctctcctct
tgatcagagtctcctttctgggatggaagataagcagtaacttctatgcc
ctgtgtttcagagttggagagaaatgaaagaaagccttgccagtgggcct
gttgcataatcatgcttgacgtgcctttccgaagtgtatttctcttcagg
aact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94737793_94738864
seq2: B6Ng01-251P16.b_47_1138 (reverse)

seq1  GGGT-ACGCGAG-TCCAATGAGGAAA--GCTAACA-TTGCAAACCTAC-T  44
      |||| ||||||| || ||||||||||  ||||||| ||||||  |||| |
seq2  GGGTAACGCGAGTTCAAATGAGGAAAAGGCTAACATTTGCAA--CTACTT  48

seq1  GGTTT-AGGGACCA-TCAGTAG-GACTTCCT--CACTTCTA-CCACGAAA  88
      ||||| |||||||| ||||||| ||||||||  |||||||| ||||||||
seq2  GGTTTAAGGGACCATTCAGTAGAGACTTCCTTCCACTTCTATCCACGAAA  98

seq1  -TTTACTCAGCACAGCTTTCACACTGA-GTGG-AATTGAAAA-CCAGACA  134
       ||||||||||||||| |||||||||| |||| ||||||||| |||||||
seq2  TTTTACTCAGCACAGC-TTCACACTGAGGTGGAAATTGAAAACCCAGACA  147

seq1  GCT--GGACAA-CTATTAAAATTCTTG-GGAAAACCTGAGAA-TTCGTGT  179
      |||  | |||| ||||||||||||||| |||||||||||||| |||||||
seq2  GCTTGGAACAACCTATTAAAATTCTTGAGGAAAACCTGAGAATTTCGTGT  197

seq1  GCATATATAATCTGATAC-TTGCATCAACTGCTCTCAAGGAAATGGAAG-  227
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  GCATATATAATCTGATACTTTGCATCAACTGCTCTCAAGGAAATGGAAGT  247

seq1  TTTTAAAAGTACCCCCAAACTCATGAATGAACGCAAAGTTAACGAGCTTT  277
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAGTACCCCCAAACTCATGAATGAACGCAAAGTTAACGAGCTTT  297

seq1  TGTAGAACACTTTCCTAGTCACCAACCCGTGAGCTCAGTCTTCAAGGTGA  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACACTTTCCTAGTCACCAACCCGTGAGCTCAGTCTTCAAGGTGA  347

seq1  GATGCGCCACCATTTTGAAGAAAAAAAAAATTACCAACTAGAGTAAATAC  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGCCACCATTTTGAAGAAAAAAAAAATTACCAACTAGAGTAAATAC  397

seq1  CTCGGCAAATGTAATAGTAAAACTGTATCCGCAGATACTGTAGGAAGGCA  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCAAATGTAATAGTAAAACTGTATCCGCAGATACTGTAGGAAGGCA  447

seq1  TACGGGAGAAAAGACATCGGCTCTACATGCCAGGCTCCCCAGCCTCTGAC  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGAGAAAAGACATCGGCTCTACATGCCAGGCTCCCCAGCCTCTGAC  497

seq1  TGGCAGGCACACTTCAGCACATAACACCGGAGCTGTCCAGCTCCGCTGAG  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCACACTTCAGCACATAACACCGGAGCTGTCCAGCTCCGCTGAG  547

seq1  CCGCATGTCCTGTTACGTAACTGCTTTGTTCTGCCTTCTTGTTCCAGCCA  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATGTCCTGTTACGTAACTGCTTTGTTCTGCCTTCTTGTTCCAGCCA  597

seq1  GTTGGAAATTAGGAGCAATATTTAAAACTTAGTAACTAGATATGCCACTT  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAATTAGGAGCAATATTTAAAACTTAGTAACTAGATATGCCACTT  647

seq1  TAGTTCTCCCACTCCTGAGTTGAGCAATGGCTCAATGACAGATACTGATT  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCCCACTCCTGAGTTGAGCAATGGCTCAATGACAGATACTGATT  697

seq1  TGGGCCTTTTACTTATATAAACAATACTGGTAGGAATATGCTTTTATATA  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTTTTACTTATATAAACAATACTGGTAGGAATATGCTTTTATATA  747

seq1  CAAGTACTTGCCCGATTAGTCCTTATAGAGCCAGGGGGTGGTAAGCACCT  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACTTGCCCGATTAGTCCTTATAGAGCCAGGGGGTGGTAAGCACCT  797

seq1  TTTATTCCAGCACTTGGGACAGAGGCAGGTGGATCTCTATGAGTTCACAG  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCAGCACTTGGGACAGAGGCAGGTGGATCTCTATGAGTTCACAG  847

seq1  CCAGGCTACTCTATAAAGCAAGATCTTGTCTCAAATAAATACTAATTAAT  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTACTCTATAAAGCAAGATCTTGTCTCAAATAAATACTAATTAAT  897

seq1  TAGTTAATCAATTTTTAATTGCTCCTTTCAGAAAGAGTCTTAGAAGTAGA  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAATCAATTTTTAATTGCTCCTTTCAGAAAGAGTCTTAGAAGTAGA  947

seq1  AACGCTATGCTGAAGGGCGCAGCCTGTGATAAATACTGTCAAAATGAAGA  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTATGCTGAAGGGCGCAGCCTGTGATAAATACTGTCAAAATGAAGA  997

seq1  GCATGCCCGTTCATACATGCTCCCACAATCTATTATCGCAAACTTCGTGC  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCCGTTCATACATGCTCCCACAATCTATTATCGCAAACTTCGTGC  1047

seq1  ACTGACGTTCCCCAGCTGTGAGAGTACTGTCCTCGTTAGGAATTC  1072
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACGTTCCCCAGCTGTGAGAGTACTGTCCTCGTTAGGAATTC  1092

seq1: chr10_94579397_94580441
seq2: B6Ng01-251P16.g_72_1125

seq1  GAATTCCCTCCCCCTAG-AGGAGGATCTCTATTGCAGGATTCCATCAATA  49
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCCCCCTAGTAGGAGGATCTCTATTGCAGGATTCCATCAATA  50

seq1  CTGGAGCCCAGTAGCTGAAGGGTTAATGCTGGGAGCAACAGGACTCTCCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCCCAGTAGCTGAAGGGTTAATGCTGGGAGCAACAGGACTCTCCA  100

seq1  ACCGTGTTGGTCATGACCTCACCTTCACCTGTTCTTAGGAACTCCCAAGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGTTGGTCATGACCTCACCTTCACCTGTTCTTAGGAACTCCCAAGT  150

seq1  GTTGATAAGAGTACCCAAGTTCAAGTCTGTCTGATTCATACTTCCCATGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAAGAGTACCCAAGTTCAAGTCTGTCTGATTCATACTTCCCATGA  200

seq1  ACTTCTTGGTGCAACTGAACTTCCCACGAATTTCTTGATTCCTCGGAGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGGTGCAACTGAACTTCCCACGAATTTCTTGATTCCTCGGAGTC  250

seq1  TTAGCTTTCTTGTCTCCAAGACAGACGTGAGAGCCACATTGCAGGGTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTCTTGTCTCCAAGACAGACGTGAGAGCCACATTGCAGGGTTTG  300

seq1  CAGTAAGATCACAGAGTTTATGGGCATTTGCATTTTAGATTGTAATTACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGATCACAGAGTTTATGGGCATTTGCATTTTAGATTGTAATTACC  350

seq1  AGTGTATGCCAGTTTTGAAGAAGGTTAGTAAGCGTGCCAGAATTCTGAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGCCAGTTTTGAAGAAGGTTAGTAAGCGTGCCAGAATTCTGAGA  400

seq1  ACATTCCAGGGGGAGGCAGTGCTAATCTTGGCCCCTTATGCTGACATTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCAGGGGGAGGCAGTGCTAATCTTGGCCCCTTATGCTGACATTGT  450

seq1  TGCTGACCAACCTTGCCATACCTGGCAGCCAAAAGTGGGGAGAACAGGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACCAACCTTGCCATACCTGGCAGCCAAAAGTGGGGAGAACAGGAT  500

seq1  GAGGCTCACTTCTCAAAGCCAGTACACTGTCCTAATTGGCAGCAAGCTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCACTTCTCAAAGCCAGTACACTGTCCTAATTGGCAGCAAGCTTT  550

seq1  TTCTTCAAACACTTAACTCATCTAAGTCTCTCAGGGTGTATGAGAAGGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAACACTTAACTCATCTAAGTCTCTCAGGGTGTATGAGAAGGCC  600

seq1  TGGTTTTCTTTGCTTTTGTTTTTCCATATACTTCTTGATTGGTCCAGTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCTTTGCTTTTGTTTTTCCATATACTTCTTGATTGGTCCAGTGA  650

seq1  GCTTGAAGGTCGAAAGGGCTTCTGAGAATCCTGTTTTCTTGGAAGCCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAGGTCGAAAGGGCTTCTGAGAATCCTGTTTTCTTGGAAGCCTTT  700

seq1  AAGAGTCCAGGCACTAGTCCCTGGAAAATATGAGGTTCTT-GGGGATTTT  748
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAGAGTCCAGGCACTAGTCCCTGGAAAATATGAGGTTCTTGGGGGATTTT  750

seq1  TAGAAGCTTAAAC-TTTTCCATCAAAGTTAAAATATCTAGAAACCCGTTC  797
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTTAAACTTTTTCCATCAAAGTTAAAATATCTAGAAACCCGTTC  800

seq1  CTGGGAAGCGTCGTCAACACCTTCTTAATTGGCCCAGTTGGCATCGTCTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGCGTCGTCAACACCTTCTTAATTGGCCCAGTTGGCATCGTCTC  850

seq1  AAGGCTGTGGTTTCCAATTCAGATCCTGGCATAATACCAAGCTCTCCTC-  896
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  AAGGCTGTGGTTTCCAATTCAGATCTTGGCATAATACCAAGCTCTCCTCT  900

seq1  TGATCAGAGTCTCC-TTCTGGGATGGAAGATAAGCAGTAACCTCTA--GC  943
      |||||||||||||| |||||||||||||||||||||||||| ||||   |
seq2  TGATCAGAGTCTCCTTTCTGGGATGGAAGATAAGCAGTAACTTCTATGCC  950

seq1  CTGTGTTTCAGAGTTGGAGAGAAATGAAAG-AAGCC-TGGCAGTGGG-CT  990
      |||||||||||||||||||||||||||||| ||||| || ||||||| ||
seq2  CTGTGTTTCAGAGTTGGAGAGAAATGAAAGAAAGCCTTGCCAGTGGGCCT  1000

seq1  GTTGCATAAATCATGC-TGACGTTGCTTTTCGGAAGTGTATTTCTCTCCA  1039
      ||||||| |||||||| ||||| ||| |||| ||||||||||||||| ||
seq2  GTTGCAT-AATCATGCTTGACG-TGCCTTTCCGAAGTGTATTTCTCTTCA  1048

seq1  GGAACT  1045
      ||||||
seq2  GGAACT  1054