BAC Information

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BAC

Clone NameB6Ng01-252E24
Chromosome10 (Build37)
Map Location 117,301,478 - 117,446,209
singlet/doubletdoublet
Overlap genenone
Upstream geneGm239, Rab3ip, D630029K05Rik, LOC544741, Best3, Lrrc10, Cct2, Frs2, Yeats4, 9530003J23Rik, Lyzs, Lyz, Cpsf6, LOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b
Downstream geneMdm1, Il22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216, Ifng, LOC100043478, LOC100042850, Dyrk2, LOC668223
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252E24.bB6Ng01-252E24.g
ACCGA059343GA059344
length505165
definitionB6Ng01-252E24.b B6Ng01-252E24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,445,699 - 117,446,209)(117,301,478 - 117,301,642)
sequence
ttcagagttctctggcttccaaatgcttctgagcttgattctgagtctct
tgggccaaaaagaagcaacttacaaacatctaaatcctaaactgcttcca
aacgacactgcttcaaagaactctgcgtgaagcagctcctttgctgcttg
agctacctattgactgcggttccttggctgtggttgtgattttttttacc
cttgaaaacacaacgctggactcaaaatcaactgatactgatactcaaaa
tcaagagataccgagaaggtctctcagcaacatgagacaattagggtgac
caaggttctctatttatccagacggacaagggtcccaagatacgggactg
tcccctttaaaactgcaaggtcactagctaactagtagcaagctagtcat
cctatcccaggcactttattggcatatcaagatggtatttgtttctggtt
ttttactatcatgtactaattgtttatgtatgtatggatgtatggatgta
tggat
ctttgctctgttcttagggagtcacacagtcctgaccctgacaggaagaa
aacaacttcaggttgagcaccacttcaaaaagtcttcctttggtttagac
ttcctgtgtcgaaactttcaaaccttctgacactgtagccattccggggt
gggggtggtgggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_117445699_117446209
seq2: B6Ng01-252E24.b_44_554 (reverse)

seq1  ATCCATACATCCATACATCCATACATACATAAACAATTAGTACATGATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATACATCCATACATCCATACATACATAAACAATTAGTACATGATAG  50

seq1  TAAAAAACCAGAAACAAATACCATCTTGATATGCCAATAAAGTGCCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACCAGAAACAAATACCATCTTGATATGCCAATAAAGTGCCTGGG  100

seq1  ATAGGATGACTAGCTTGCTACTAGTTAGCTAGTGACCTTGCAGTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATGACTAGCTTGCTACTAGTTAGCTAGTGACCTTGCAGTTTTAAA  150

seq1  GGGGACAGTCCCGTATCTTGGGACCCTTGTCCGTCTGGATAAATAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAGTCCCGTATCTTGGGACCCTTGTCCGTCTGGATAAATAGAGAA  200

seq1  CCTTGGTCACCCTAATTGTCTCATGTTGCTGAGAGACCTTCTCGGTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTCACCCTAATTGTCTCATGTTGCTGAGAGACCTTCTCGGTATCT  250

seq1  CTTGATTTTGAGTATCAGTATCAGTTGATTTTGAGTCCAGCGTTGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTTGAGTATCAGTATCAGTTGATTTTGAGTCCAGCGTTGTGTTT  300

seq1  TCAAGGGTAAAAAAAATCACAACCACAGCCAAGGAACCGCAGTCAATAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGTAAAAAAAATCACAACCACAGCCAAGGAACCGCAGTCAATAGG  350

seq1  TAGCTCAAGCAGCAAAGGAGCTGCTTCACGCAGAGTTCTTTGAAGCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCAAGCAGCAAAGGAGCTGCTTCACGCAGAGTTCTTTGAAGCAGTG  400

seq1  TCGTTTGGAAGCAGTTTAGGATTTAGATGTTTGTAAGTTGCTTCTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTGGAAGCAGTTTAGGATTTAGATGTTTGTAAGTTGCTTCTTTTTG  450

seq1  GCCCAAGAGACTCAGAATCAAGCTCAGAAGCATTTGGAAGCCAGAGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGAGACTCAGAATCAAGCTCAGAAGCATTTGGAAGCCAGAGAACT  500

seq1  CTGAAGAATTC  511
      |||||||||||
seq2  CTGAAGAATTC  511

seq1: chr10_117301478_117301642
seq2: B6Ng01-252E24.g_74_238

seq1  CTTTGCTCTGTTCTTAGGGAGTCACACAGTCCTGACCCTGACAGGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTCTGTTCTTAGGGAGTCACACAGTCCTGACCCTGACAGGAAGAA  50

seq1  AACAACTTCAGGTTGAGCACCACTTCAAAAAGTCTTCCTTTGGTTTAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTCAGGTTGAGCACCACTTCAAAAAGTCTTCCTTTGGTTTAGAC  100

seq1  TTCCTGTGTCGAAACTTTCAAACCTTCTGACACTGTAGCCATTCCGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGTCGAAACTTTCAAACCTTCTGACACTGTAGCCATTCCGGGGT  150

seq1  GGGGGTGGTGGGTGG  165
      |||||||||||||||
seq2  GGGGGTGGTGGGTGG  165