BAC Information

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BAC

Clone NameB6Ng01-252F10
Chromosome10 (Build37)
Map Location 34,632,067 - 34,633,228
singlet/doubletsinglet
Overlap genenone
Upstream geneRshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse, Tspyl1, Tspyl4, Nt5dc1, Col10a1, Frk, LOC667824
Downstream geneLOC100041585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252F10.b
ACCGA059363
length1,144
definitionB6Ng01-252F10.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatcgaaggcataatctgtgagaacgccatacactgaagaaa
aatacacaataaactggggactgtgagatattattgagaaaaagtaaagc
actctgaaatggagaaaatagcatggattttatgattcaatattcaaaaa
acatcacttgtacactaacatatgtattgttgaggcaggcctccttccct
aaacctaatttaaaaattcaaactaagggtaggcagaatgctagtgagtt
cctgtatgtgaatgtgtaaatgtttgtgtatgttcctatggcttgaggga
aaatagacaacagttttaaaagaaacttattcagaaactcatttaaagac
tcaaacttaacaaacaaatgaaactaaacatcaacagcacatataatgaa
gttgtattaactagtatcctgtatgactgagcacaaggatagagaagcta
gctgataaaatggagtaggggtgtgcaataagaatctcacgggcagagtt
tgttcagattttatttaaaaggtggtgcaatgaaataaggttctagttat
atttccattaaacaaaactcgaagtagccatattttctatccatgatctc
ttaggtttcagcatcaacaacttgcttctagatatgtcacagatctacat
ctgaatgctgtatttccagtggaacaaaaatatcatgacatcatataagg
gtaggttactatgcatatgtaaagaccacactatgagtaaaatcagtctg
cattaagaactcctgttcatcaaaagatacaatcaagagagtgccaagaa
atacagactaagatataaaagacagagttggaaagattcccagtgcttac
atgtcagcagaacaaacaatgagcaaacaacatggtcaccgtgttgccag
aagtgcactgaacaagtgcaagcttgatcaaatgacagatcattttccag
aaaatagaatcaacccaacatgacaaaaggaaatagatcacagcaaaagg
agctgtgcaaaaggtagcacatagctgacttgagtttcagagccatatag
tacaaaatagcctgccctgcacaaaatagcaccagcccatgaatgcacaa
gaccagaaattattctgcactactgcagcattctgattgtgaga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_34632067_34633228
seq2: B6Ng01-252F10.b_42_1185 (reverse)

seq1  TCTCA-AATCAGATGGCTGCAGTAGTGCAGATTTATTTCTGGGTCTTTTG  49
      ||||| |||||||  |||||||||||||||| | |||||| ||||||   
seq2  TCTCACAATCAGAATGCTGCAGTAGTGCAGAATAATTTCT-GGTCTT---  46

seq1  TTGCACTCAATGGCCTGTTTCTATTTTTGTGCCAGCGCCAGGCTATTTTT  99
       |||| || |||| ||| | ||| ||||||| ||| | ||||||||||| 
seq2  GTGCATTC-ATGGGCTGGTGCTA-TTTTGTG-CAG-GGCAGGCTATTTT-  91

seq1  GTTAC--TATGGCTCTGAAACCTCAAGTCAGCTATTGTGCTACCTTTTGC  147
        |||  ||||||||||||| ||||||||||||| |||||||||||||||
seq2  -GTACTATATGGCTCTGAAA-CTCAAGTCAGCTA-TGTGCTACCTTTTGC  138

seq1  ACAGCTCCTTTTGCTTGTGATCTTATTTCCTTTTGTCATGTTGGGTTTGA  197
      |||||||||||||| ||||||| |||||||||||||||||||||| ||||
seq2  ACAGCTCCTTTTGC-TGTGATC-TATTTCCTTTTGTCATGTTGGG-TTGA  185

seq1  TTCTATTTTTCTTGGAAAATGATCTTGTCATTTTGATCAAGCTTGCACTT  247
      |||||||||   |||||||||||| ||||| |||||||||||||||||||
seq2  TTCTATTTT--CTGGAAAATGATC-TGTCA-TTTGATCAAGCTTGCACTT  231

seq1  GTTCAGTTGCACTTCTGGCAACACGGTGACCATGTTGTTTGCTCATTGTT  297
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAG-TGCACTTCTGGCAACACGGTGACCATGTTGTTTGCTCATTGTT  280

seq1  TGTTCTGCTGACATGTAAGCACTGGGAATCTTTCCAACTCTGTCTTTTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCTGACATGTAAGCACTGGGAATCTTTCCAACTCTGTCTTTTAT  330

seq1  ATCTTAGTCTGTATTTCTTGGCACTCTCTTGATTGTATCTTTTGATGAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGTCTGTATTTCTTGGCACTCTCTTGATTGTATCTTTTGATGAAC  380

seq1  AGGAGTTCTTAATGCAGACTGATTTTACTCATAGTGTGGTCTTTACATAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTCTTAATGCAGACTGATTTTACTCATAGTGTGGTCTTTACATAT  430

seq1  GTATAGTAACCTACCCTTTTTTGATGTCATGATATTTTTGTTCCACTGGA  497
      | |||||||||||||||| | |||||||||||||||||||||||||||||
seq2  GCATAGTAACCTACCCTTATATGATGTCATGATATTTTTGTTCCACTGGA  480

seq1  AATACAGCATTCAGATGTAGATCTGTGACATATCTAGAAGCAAGTTGTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCATTCAGATGTAGATCTGTGACATATCTAGAAGCAAGTTGTTG  530

seq1  ATGCTGAAACCTAAGAGATCATGGATAGAAAATATGGCTACTACGAGTTT  597
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGCTGAAACCTAAGAGATCATGGATAGAAAATATGGCTACTTCGAGTTT  580

seq1  TGTTTAATGGAAATATAACTAGAACCTTATTTCATTGCACCACCTTTTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATGGAAATATAACTAGAACCTTATTTCATTGCACCACCTTTTAA  630

seq1  ATAAAATCTGAACAAACTCTGCCCGTGAGATTCTTATTGCACACCCCTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCTGAACAAACTCTGCCCGTGAGATTCTTATTGCACACCCCTAC  680

seq1  TCCATTTTATCAGCTAGCTTCTCTATCCTTGTGCTCAGTCATACAGGATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTATCAGCTAGCTTCTCTATCCTTGTGCTCAGTCATACAGGATA  730

seq1  CTAGTTAATACAACTTCATTATATGTGCTGTTGATGTTTAGTTTCATTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTAATACAACTTCATTATATGTGCTGTTGATGTTTAGTTTCATTTG  780

seq1  TTTGTTAAGTTTGAGTCTTTAAATGAGTTTCTGAATAAGTTTCTTTTAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAAGTTTGAGTCTTTAAATGAGTTTCTGAATAAGTTTCTTTTAAA  830

seq1  ACTGTTGTCTATTTTCCCTCAAGCCATAGGAACATACACAAACATTTACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTCTATTTTCCCTCAAGCCATAGGAACATACACAAACATTTACA  880

seq1  CATTCACATACAGGAACTCACTAGCATTCTGCCTACCCTTAGTTTGAATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACATACAGGAACTCACTAGCATTCTGCCTACCCTTAGTTTGAATT  930

seq1  TTTAAATTAGGTTTAGGGAAGGAGGCTTGCCTCAACAATACATATGTTAG  997
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTAAATTAGGTTTAGGGAAGGAGGCCTGCCTCAACAATACATATGTTAG  980

seq1  TGTACAAGTGATGTCTTTTGAATATTGAATCATAAAATCCATGCTATTTT  1047
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGTACAAGTGATGTTTTTTGAATATTGAATCATAAAATCCATGCTATTTT  1030

seq1  CTCCATTTCAGAGTGCTTTACTTTTTCTCAATAATATCTCACAGTCCCCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTCAGAGTGCTTTACTTTTTCTCAATAATATCTCACAGTCCCCA  1080

seq1  GTTTATTGTGTATTTTTCTTCAGTGTATGGCTTTCTCACAGATTATGCCT  1147
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTTATTGTGTATTTTTCTTCAGTGTATGGCGTTCTCACAGATTATGCCT  1130

seq1  TTGATTAAAGAATTC  1162
      | || ||||||||||
seq2  TCGA-TAAAGAATTC  1144