BAC Information

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BAC

Clone NameB6Ng01-257O03
Chromosome10 (Build37)
Map Location 80,926,130 - 81,026,303
singlet/doubletdoublet
Overlap geneBrunol5, Ncln, Edg6, Gna15, Gna11, Aes
Upstream geneOnecut3, Atp8b3, Rexo1, Klf16, D10Bwg1364e, Scamp4, Csnk1g2, Btbd2, Mknk2, Mobkl2a, 9030607L17Rik, Ap3d1, Dot1l, Plekhj1, Sf3a2, Amh, Jsrp1, Oaz1, BC072620, Lsm7, 3110056O03Rik, Tmprss9, Timm13, Lmnb2, Gadd45b, Gng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic
Downstream geneTle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257O03.bB6Ng01-257O03.g
ACCGA063466GA063467
length4571,108
definitionB6Ng01-257O03.b B6Ng01-257O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,025,841 - 81,026,303)(80,926,130 - 80,927,251)
sequence
tccacacagacagacagatgctgaagactgagatggcctggggctgagag
gaacagagcaccccaaggtgtcctggcttcaggaaactttgtcatgtcca
gcccctctttctctctagtcacatcagagccggcagctgaagctgctttg
ccttcccatgctgtgtgattctacctctgtgggccccacttgctttctct
ttgtagcagcaaccttcctggaccaggacaggtcagtggagtcaaagaac
tgggcctgtggcttgctctccagtcctaggaggctactcctaggtgtggc
tcttgccaccatgcctagcagtgactctcccaagttgtccttggacctcc
acacctgaacaacagcacgaccccccaatgtaacctttctttctttcttc
ctctctttctttctcttttttcctccttcccttcccttcccttcccttcc
cttccct
gaattcattgccatgagggagccaggcctgtcgctgcaaggtacagatgt
tgtctgtttctctgtctatatagttaattttaggggcgcgtgtggagggc
agaggacatgggatttatcttgcttggtggcaggcacctttacccatctt
cctgtcctgaatttgaagggggacctagaaggggcctgcatggccaagtg
tcactgatgtcatctgtggttagctttcagatcttggctgtcaagagaca
agcacatcctgctggtggcctcgggcacaaagtgtccaagagacacagtg
cagcctcgtgtgggacaatccaggggcaccagctaacctcaaagtccaag
ggctcggctgtgaacccatcccctgcaccctggagtgtgagcccccatca
caggtgagggcagctttgccacaagggtggcctgaggctcccccttccac
ctctccccaggccttcctggtccataggtaggtaaaagtaggacttcccg
gaaggcccacacaccaggaacttctcaatgtctctgtctacacaggtggg
gccagaacacctgagctccagatgggaaaactgaggcaggtcgttaagta
ctctctgatcaccgtgcccagtcagaagaggatgtgagtggccttgggtc
gcaggattccggactcctgcttcctcccgcatgccctccacagcctcact
ttactgggaaggcctcagtttacccaagatacctcctcggactccggact
cctgctttctcccgcatgccctccacaggcttggcttcactgggaaggcc
tcagtttacccaagaagccttctcgcacaaacgcgcaccaaaaagggggt
ttcctcgcttgtccattggggggtgggaacctcaagggccgccgttccat
ggaggggcgaggtcagcagtgcagttgagggtggggctggcagggtcgcc
tcaccttcgcgctgctgctgcagagtgcggaagctgcgaacgctgtgtgc
cacgggcgcgatgcgcggtgggatacatgctgcgagagcagaggccatac
tggagccacagacagatcagaggctagtccagaccgagggagcggcctag
actgaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81025841_81026303
seq2: B6Ng01-257O03.b_49_511 (reverse)

seq1  AGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGAGGAAAAAAGAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGAGGAAAAAAGAGAAAGA  50

seq1  AAGAGAGGAAGAAAGAAAGAAAGGTTACATTGGGGGGTCGTGCTGTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGAAGAAAGAAAGAAAGGTTACATTGGGGGGTCGTGCTGTTGTT  100

seq1  CAGGTGTGGAGGTCCAAGGACAACTTGGGAGAGTCACTGCTAGGCATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGGAGGTCCAAGGACAACTTGGGAGAGTCACTGCTAGGCATGGT  150

seq1  GGCAAGAGCCACACCTAGGAGTAGCCTCCTAGGACTGGAGAGCAAGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAGCCACACCTAGGAGTAGCCTCCTAGGACTGGAGAGCAAGCCAC  200

seq1  AGGCCCAGTTCTTTGACTCCACTGACCTGTCCTGGTCCAGGAAGGTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGTTCTTTGACTCCACTGACCTGTCCTGGTCCAGGAAGGTTGCT  250

seq1  GCTACAAAGAGAAAGCAAGTGGGGCCCACAGAGGTAGAATCACACAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAAGAGAAAGCAAGTGGGGCCCACAGAGGTAGAATCACACAGCAT  300

seq1  GGGAAGGCAAAGCAGCTTCAGCTGCCGGCTCTGATGTGACTAGAGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGCAAAGCAGCTTCAGCTGCCGGCTCTGATGTGACTAGAGAGAAA  350

seq1  GAGGGGCTGGACATGACAAAGTTTCCTGAAGCCAGGACACCTTGGGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCTGGACATGACAAAGTTTCCTGAAGCCAGGACACCTTGGGGTGC  400

seq1  TCTGTTCCTCTCAGCCCCAGGCCATCTCAGTCTTCAGCATCTGTCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCCTCTCAGCCCCAGGCCATCTCAGTCTTCAGCATCTGTCTGTCT  450

seq1  GTGTGGAGAATTC  463
      |||||||||||||
seq2  GTGTGGAGAATTC  463

seq1: chr10_80926130_80927251
seq2: B6Ng01-257O03.g_68_1175

seq1  GAATTCATTGCCATGAGGGAGCCAGGCCTGTCGCTGCAAGGTACAGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCCATGAGGGAGCCAGGCCTGTCGCTGCAAGGTACAGATGT  50

seq1  TGTCTGTTTCTCTGTCTATATAGTTAATTTTAGGGGCGCGTGTGGAGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTTCTCTGTCTATATAGTTAATTTTAGGGGCGCGTGTGGAGGGC  100

seq1  AGAGGACATGGGATTTATCTTGCTTGGTGGCAGGCACCTTTACCCATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACATGGGATTTATCTTGCTTGGTGGCAGGCACCTTTACCCATCTT  150

seq1  CCTGTCCTGAATTTGAAGGGGGACCTAGAAGGGGCCTGCATGGCCAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTGAATTTGAAGGGGGACCTAGAAGGGGCCTGCATGGCCAAGTG  200

seq1  TCACTGATGTCATCTGTGGTTAGCTTTCAGATCTTGGCTGTCAAGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATGTCATCTGTGGTTAGCTTTCAGATCTTGGCTGTCAAGAGACA  250

seq1  AGCACATCCTGCTGGTGGCCTCGGGCACAAAGTGTCCAAGAGACACAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATCCTGCTGGTGGCCTCGGGCACAAAGTGTCCAAGAGACACAGTG  300

seq1  CAGCCTCGTGTGGGACAATCCAGGGGCACCAGCTAACCTCAAAGTCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCGTGTGGGACAATCCAGGGGCACCAGCTAACCTCAAAGTCCAAG  350

seq1  GGCTCGGCTGTGAACCCATCCCCTGCACCCTGGAGTGTGAGCCCCCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGGCTGTGAACCCATCCCCTGCACCCTGGAGTGTGAGCCCCCATCA  400

seq1  CAGGTGAGGGCAGCTTTGCCACAAGGGTGGCCTGAGGCTCCCCCTTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGGGCAGCTTTGCCACAAGGGTGGCCTGAGGCTCCCCCTTCCAC  450

seq1  CTCTCCCCAGGCCTTCCTGGTCCATAGGTAGGTAAAAGTAGGACTTCCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCAGGCCTTCCTGGTCCATAGGTAGGTAAAAGTAGGACTTCCCG  500

seq1  GAAGGCCCACACACCAGGAACTTCTCAATGTCTCTGTCTACACAGGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCCACACACCAGGAACTTCTCAATGTCTCTGTCTACACAGGTGGG  550

seq1  GCCAGAACACCTGAGCTCCAGATGGGAAAACTGAGGCAGGTCGTTAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAACACCTGAGCTCCAGATGGGAAAACTGAGGCAGGTCGTTAAGTA  600

seq1  CTCTCTGATCACCGTGCCCAGTCAGAAGAGGATGTGAGTGGCCTTGGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGATCACCGTGCCCAGTCAGAAGAGGATGTGAGTGGCCTTGGGTC  650

seq1  GCAGGATTCCGGACTCCTGCTTCCTCCCGCATGCCCTCCACAGCCTCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATTCCGGACTCCTGCTTCCTCCCGCATGCCCTCCACAGCCTCACT  700

seq1  TTACTGGGAAGGCCTCAGTTTACCCAAGATACCTCCTCGGACTCCGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGGAAGGCCTCAGTTTACCCAAGATACCTCCTCGGACTCCGGACT  750

seq1  CCTGCTTTCTCCCGCATGCCCTCCACAGGCTTGGCTTCACTGGGAAGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTTCTCCCGCATGCCCTCCACAGGCTTGGCTTCACTGGGAAGGCC  800

seq1  TCAGTTTACCCAAGAAGCCTTCTCGCACAAACGCGCACCAAAAAGGGGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTACCCAAGAAGCCTTCTCGCACAAACGCGCACCAAAAAGGGGGT  850

seq1  TTCCTCGCTTGTCCATTGGGGGGTGGGAACCTCAAGGGCCGCCGTTCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCGCTTGTCCATTGGGGGGTGGGAACCTCAAGGGCCGCCGTTCCAT  900

seq1  GGAGGGGCGAGGTCAGCAGTGCAGTTGAGGGTGGGGCTGGCAGGGGTCGC  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGAGGGGCGAGGTCAGCAGTGCAGTTGAGGGTGGGGCTGGCA-GGGTCGC  949

seq1  CTCACCTTCGCGCTGCTGCTGCAGGAGGTGCGGAGGCTGCGGAACGCTGT  1000
      ||||||||||||||||||||||||   ||||||| ||||| |||||||||
seq2  CTCACCTTCGCGCTGCTGCTGCAG--AGTGCGGAAGCTGC-GAACGCTGT  996

seq1  GTGCCACGGGCGCGATGGCCGCGGTGGGATACATGGCTGCGGAGAGCAGA  1050
      |||||||||||||||||  ||||||||||||||| ||||| |||||||||
seq2  GTGCCACGGGCGCGATG--CGCGGTGGGATACAT-GCTGC-GAGAGCAGA  1042

seq1  GGCCATACT-GAGCCACAGGACCAGAGCAGAGGGCGAGGCCAGACCGAGG  1099
      ||||||||| |||||||||   |||| |||| ||| || ||||||||| |
seq2  GGCCATACTGGAGCCACAG--ACAGATCAGA-GGCTAGTCCAGACCGA-G  1088

seq1  GGAGGCGGGGCTAGGACTGAGGG  1122
      ||||   || ||| |||||||||
seq2  GGAG--CGGCCTA-GACTGAGGG  1108